Cicer_arietinum_v1_Contig1690

Contig Overview
NameCicer_arietinum_v1_Contig1690
Unique NameCicer_arietinum_v1_Contig1690
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length443
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR398405ESTGR398405:166..452 -Cicer arietinum unigene v1n/a
GR396484ESTGR396484:34..389 +Cicer arietinum unigene v1n/a
GR390930ESTGR390930:15..407 +Cicer arietinum unigene v1n/a
GR407333ESTGR407333:1..443 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
KEGG analysis for Cicer arietinum unigene v12011-01-05
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR398405GR398405Cicer arietinumEST
GR396484GR396484Cicer arietinumEST
GR390930GR390930Cicer arietinumEST
GR407333GR407333Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig1690 vs. TrEMBL
Match: Q1STQ6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC136139g5v2 PE=4 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.337e-27
Identity = 56/58 (96.55%), Postives = 58/58 (100.00%), Query Frame = 3
Query:   27 MALHWLEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLVD 200
            MALHWLEA+LPLGIIAGMLCVMGNAQYYIH+AAHGRPKHIGNDLWDVAMERRDKKLVD
Sbjct:    1 MALHWLEAMLPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDLWDVAMERRDKKLVD 58          
BLAST of Cicer_arietinum_v1_Contig1690 vs. TrEMBL
Match: B6SP36_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.747e-25
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3
Query:   33 LHWLEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLVD 200
            LHWLEAVLPLGII GMLC+MGNAQY+IHKAAHGRPKHIGND+WDVAMERRDKKLV+
Sbjct:    4 LHWLEAVLPLGIIGGMLCIMGNAQYFIHKAAHGRPKHIGNDMWDVAMERRDKKLVE 59          
BLAST of Cicer_arietinum_v1_Contig1690 vs. TrEMBL
Match: C5YZU8_SORBI (Putative uncharacterized protein Sb09g023650 OS=Sorghum bicolor GN=Sb09g023650 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.726e-24
Identity = 50/56 (89.29%), Postives = 55/56 (98.21%), Query Frame = 3
Query:   33 LHWLEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLVD 200
            LHWLEAVLPLGII GMLC+MGNAQY+IHKAAHGRPKHIGND+WDVAMERRDKKL++
Sbjct:    4 LHWLEAVLPLGIIGGMLCIMGNAQYFIHKAAHGRPKHIGNDMWDVAMERRDKKLME 59          
BLAST of Cicer_arietinum_v1_Contig1690 vs. TrEMBL
Match: B9T0P0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0126310 PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.845e-24
Identity = 51/58 (87.93%), Postives = 55/58 (94.83%), Query Frame = 3
Query:   27 MALHWLEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLVD 200
            M+  WLEA LPLGIIAGMLCVMGNAQYYIH+AAHGRPKHIGND+WDVAMERRDKKLV+
Sbjct:    1 MSWRWLEAALPLGIIAGMLCVMGNAQYYIHRAAHGRPKHIGNDMWDVAMERRDKKLVE 58          
BLAST of Cicer_arietinum_v1_Contig1690 vs. TrEMBL
Match: Q84MD9_ARATH (At3g08610 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.565e-24
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 3
Query:    9 RKEGRKMALHWLEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLVD 200
            RKE  KM+L WLEA+LPLGII GMLC+MGN+QYYIHKA HGRPKHIG+D WDVAMERRDKK+V+
Sbjct:    3 RKEKTKMSLVWLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVE 66          
BLAST of Cicer_arietinum_v1_Contig1690 vs. TrEMBL
Match: D7UBK7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_103.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010904001 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.492e-23
Identity = 49/54 (90.74%), Postives = 53/54 (98.15%), Query Frame = 3
Query:   39 WLEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLVD 200
            WL+A LPLGIIAGMLCVMGNAQ+YIHKAAHGRPKH+GNDLWDVAMERRDKKLV+
Sbjct:    5 WLQAALPLGIIAGMLCVMGNAQFYIHKAAHGRPKHVGNDLWDVAMERRDKKLVE 58          
BLAST of Cicer_arietinum_v1_Contig1690 vs. TrEMBL
Match: B6TSJ6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.255e-23
Identity = 50/56 (89.29%), Postives = 54/56 (96.43%), Query Frame = 3
Query:   33 LHWLEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLVD 200
            LH LEAVLPLGII GMLC+MGNAQY+IHKAAHGRPKHIGND+WDVAMERRDKKLV+
Sbjct:    4 LHSLEAVLPLGIIGGMLCIMGNAQYFIHKAAHGRPKHIGNDMWDVAMERRDKKLVE 59          
BLAST of Cicer_arietinum_v1_Contig1690 vs. TrEMBL
Match: Q9C9Z5_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At3g08610 PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.017e-22
Identity = 47/58 (81.03%), Postives = 54/58 (93.10%), Query Frame = 3
Query:   27 MALHWLEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLVD 200
            M+L WLEA+LPLGII GMLC+MGN+QYYIHKA HGRPKHIG+D WDVAMERRDKK+V+
Sbjct:    1 MSLVWLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVE 58          
BLAST of Cicer_arietinum_v1_Contig1690 vs. TrEMBL
Match: D7L761_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478162 PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.017e-22
Identity = 47/58 (81.03%), Postives = 54/58 (93.10%), Query Frame = 3
Query:   27 MALHWLEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLVD 200
            M+L WLEA+LPLGII GMLC+MGN+QYYIHKA HGRPKHIG+D WDVAMERRDKK+V+
Sbjct:    1 MSLVWLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVE 58          
BLAST of Cicer_arietinum_v1_Contig1690 vs. TrEMBL
Match: Q5KQI2_ORYSJ (Os05g0481600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0095J22.8 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.367e-21
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 3
Query:   33 LHWLEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLV 197
            LHWLEA+LPLGII GMLC+MGNAQYYIH+AAHGRPKHIGND WD+AM RRDK L+
Sbjct:    4 LHWLEAMLPLGIIGGMLCIMGNAQYYIHRAAHGRPKHIGNDNWDMAMARRDKVLL 58          
BLAST of Cicer_arietinum_v1_Contig1690 vs. TAIR peptide
Match: AT3G08610.1 (| Symbols: | unknown protein; Has 40 Blast hits to 40 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:2616435-2616768 REVERSE LENGTH=65)

HSP 1 Score: 106.686 bits (265), Expect = 5.369e-24
Identity = 47/58 (81.03%), Postives = 54/58 (93.10%), Query Frame = 3
Query:   27 MALHWLEAVLPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDLWDVAMERRDKKLVD 200
            M+L WLEA+LPLGII GMLC+MGN+QYYIHKA HGRPKHIG+D WDVAMERRDKK+V+
Sbjct:    1 MSLVWLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVE 58          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1690 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q1STQ6_MEDTR6.337e-2796.55Putative uncharacterized protein OS=Medicago trunc... [more]
B6SP36_MAIZE7.747e-2591.07Putative uncharacterized protein OS=Zea mays PE=4 ... [more]
C5YZU8_SORBI1.726e-2489.29Putative uncharacterized protein Sb09g023650 OS=So... [more]
B9T0P0_RICCO3.845e-2487.93Putative uncharacterized protein OS=Ricinus commun... [more]
Q84MD9_ARATH8.565e-2479.69At3g08610 OS=Arabidopsis thaliana PE=4 SV=1[more]
D7UBK7_VITVI2.492e-2390.74Whole genome shotgun sequence of line PN40024, sca... [more]
B6TSJ6_MAIZE3.255e-2389.29Putative uncharacterized protein OS=Zea mays PE=4 ... [more]
Q9C9Z5_ARATH8.017e-2281.03Putative uncharacterized protein OS=Arabidopsis th... [more]
D7L761_ARALY8.017e-2281.03Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q5KQI2_ORYSJ1.367e-2183.64Os05g0481600 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of Cicer_arietinum_v1_Contig1690 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G08610.15.369e-2481.03| Symbols: | unknown protein; Has 40 Blast hits t... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 17..27
score: NAcoord: 37..52
score
NoneNo IPR availableSEGsegsegcoord: 39..52
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1690 ID=Cicer_arietinum_v1_Contig1690; Name=Cicer_arietinum_v1_Contig1690; organism=Cicer arietinum; type=contig; length=443bp
GGTTGTGAAGGAAGGAAGGAAGAAAGATGGCGTTGCATTGGTTGGAAGCT
GTGCTACCTCTTGGAATTATTGCTGGAATGCTTTGTGTTATGGGAAACGC
TCAGTATTACATCCACAAAGCTGCTCACGGCCGACCTAAGCACATCGGCA
ACGACTTGTGGGACGTCGCCATGGAGCGAAGGGACAAGAAGCTCGTCGAT
CAAGCTTCTGCCGCCTCAAATTAAATCAATCAGGCTGTTTTATCAACGTG
CTTGTGAAGGGAATAAATTGCTTATATGATGCTCTTGAGCTGTTCCAAGG
AAGCAGAGTAGTTTGCTACAATTAAATTTCCATATGTTTTCTTGTATGAA
ATTTGACATAAGCTTTATCATATACATATGCTCTAATCAATTGTTTTCTT
TTAGTTGAACACGGTGAAATAGACATAATATGATCTTTTTGAG
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