Cicer_arietinum_v1_Contig1704

Contig Overview


Name	Cicer_arietinum_v1_Contig1704
Unique Name	Cicer_arietinum_v1_Contig1704
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	676

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR407229	EST	GR407229:1..620 -	Cicer arietinum unigene v1	n/a
FE671026	EST	FE671026:83..647 -	Cicer arietinum unigene v1	n/a
GR400274	EST	GR400274:302..665 +	Cicer arietinum unigene v1	n/a
HO063950	EST	HO063950:406..676 +	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR407229	GR407229	Cicer arietinum	EST
FE671026	FE671026	Cicer arietinum	EST
GR400274	GR400274	Cicer arietinum	EST
HO063950	HO063950	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
Match: TMEDA_DICDI (Transmembrane emp24 domain-containing protein A OS=Dictyostelium discoideum GN=empA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.744e-18
Identity = 51/137 (37.23%), Postives = 78/137 (56.93%), Query Frame = 1

Query:    1 FTATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYS--TPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLF 405
            FT  SP   +V   +  S      ++   G+Y FCF N  S  T +TVSF + VG      ++AK + L PI   I  L + + +V  EQ Y + R+A HR+T EST++RV++++V E  +L A+S+ Q+ Y+RR F
Sbjct:   63 FTIISPDKRIVYSGQRESEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSFILSVGESSPIREIAKKKDLTPIERSIMTLSDGVIAVKNEQNYFKMREAAHRNTAESTNSRVLWWSVFEAFVLIALSIWQIYYLRRFF 199

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
Match: TMED2_RAT (Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus GN=Tmed2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.457e-17
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = 1

Query:   10 TSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYST--PETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLF 405
            T P    +      S  K+ F A + G YKFCF N  ST  P+ V F I +G  P   D+  + H + +   I EL  A+ +V  EQ+Y+  R+  HR  N++T++RV+ ++  E L+L A+++ Q+ Y++R F
Sbjct:   62 TGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 195

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
Match: TMED2_MOUSE (Transmembrane emp24 domain-containing protein 2 OS=Mus musculus GN=Tmed2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.457e-17
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = 1

Query:   10 TSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYST--PETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLF 405
            T P    +      S  K+ F A + G YKFCF N  ST  P+ V F I +G  P   D+  + H + +   I EL  A+ +V  EQ+Y+  R+  HR  N++T++RV+ ++  E L+L A+++ Q+ Y++R F
Sbjct:   62 TGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 195

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
Match: TMED2_HUMAN (Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens GN=TMED2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.457e-17
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = 1

Query:   10 TSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYST--PETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLF 405
            T P    +      S  K+ F A + G YKFCF N  ST  P+ V F I +G  P   D+  + H + +   I EL  A+ +V  EQ+Y+  R+  HR  N++T++RV+ ++  E L+L A+++ Q+ Y++R F
Sbjct:   62 TGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 195

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
Match: TMED2_CRIGR (Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Cricetulus griseus GN=TMED2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.457e-17
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = 1

Query:   10 TSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYST--PETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLF 405
            T P    +      S  K+ F A + G YKFCF N  ST  P+ V F I +G  P   D+  + H + +   I EL  A+ +V  EQ+Y+  R+  HR  N++T++RV+ ++  E L+L A+++ Q+ Y++R F
Sbjct:   57 TGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFF 190

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
Match: TMED_NEMVE (Transmembrane emp24 domain-containing protein OS=Nematostella vectensis GN=v1g194562 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.979e-15
Identity = 40/132 (30.30%), Postives = 75/132 (56.82%), Query Frame = 1

Query:   16 PGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYST--PETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLF 405
            P   V+   +  +  K+ F A + G Y +CF N  ST  P+ + F + +G  P +     +   D ++  +++L EA+  V  EQ+Y+  R+  HR  N++T++RV++++  E L+L A+++ QV Y++R F
Sbjct:   66 PDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTMTPKVLKFSMDIGEAPKDTSKEDNAGHDKLSEMVSQLSEAMTGVKHEQEYMEVRERIHRSINDNTNSRVVWWSFFESLVLVAMTLGQVYYLKRFF 197

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
Match: TMED7_HUMAN (Transmembrane emp24 domain-containing protein 7 OS=Homo sapiens GN=TMED7 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.932e-13
Identity = 51/137 (37.23%), Postives = 72/137 (52.55%), Query Frame = 1

Query:   16 PGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYST--PETVSFYIHVGH----IPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFS 408
            P G V+        D F F A  +G YKFCF N +ST   +TV F   VG      PSE+ ++    ++   V I    EAL+SV   Q + R R+A+ R   E  +TRV +++VGE L+L  VS+ QV  ++  FS
Sbjct:   80 PDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLFPSENRVSALTQMESACVSI---HEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFS 213

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
Match: TMED2_CAEEL (Suppressor/enhancer of lin-12 protein 9 OS=Caenorhabditis elegans GN=sel-9 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.532e-13
Identity = 44/138 (31.88%), Postives = 72/138 (52.17%), Query Frame = 1

Query:   10 TSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYST--PETVSFYIHVG--HIPSEHDLAKDEHLDPINVK--IAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLF 405
            T P    +   +  S  KF F A + G+Y +CF N  ST  P+ V F + +   H  +    A  +  D   ++  + EL  AL SV  EQ+Y+  R+  HR+ NE+T++RV+ +   E  +L  ++V Q+ Y++R F
Sbjct:   60 TGPDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTPKAVMFTVEITEPHQQAPGAAANQDAADNAKLEEMVRELSSALMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVLVGMTVGQIFYLKRFF 197

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
Match: TMEDB_DICDI (Transmembrane emp24 domain-containing protein B OS=Dictyostelium discoideum GN=empB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.901e-12
Identity = 46/141 (32.62%), Postives = 76/141 (53.90%), Query Frame = 1

Query:   10 TSPGGNVVQD-------IKGTSGDKFQFKAPVHGMYKFCFHNPYS--TPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLF 405
            T P GN + +       +KG    K  F A   G YK CF+N  S  T + V+F           ++AK + + P++  + ++   L+SV  EQK LR R+  +R T+EST+ RV+++T+ E ++L  + V Q+ Y+R+ F
Sbjct:   66 TDPKGNTIFERLHFDTQMKG----KQSFTAGESGAYKVCFNNEMSRFTAKVVTF-TWASEEEGVKEVAKGDSITPMDQSVQKIERVLQSVIHEQKKLRYREQANRDTSESTNARVVWWTIAEVIVLVVMGVGQIWYLRKWF 201

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
Match: EMP24_SCHPO (Endosomal protein P24B OS=Schizosaccharomyces pombe GN=emp24 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.223e-12
Identity = 41/133 (30.83%), Postives = 73/133 (54.89%), Query Frame = 1

Query:   13 SPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPET--VSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLF 405
            +P G ++      S  ++ F     G Y +CF+N     E+  V F +H     S+ DL  +   +P+  K+ +L + +  V  EQ+Y  AR+  HR+T EST+ RV ++++ + ++L +V V Q+ Y++RLF
Sbjct:   64 NPAGQIMHQEVPNSMAQYSFTVKNPGKYMYCFYNDALDGESKEVLFNVHGVIYISDEDLDAN---NPLLGKVRQLHDTISKVKHEQEYFVARERIHRNTAESTNDRVKWWSILQTVILVSVCVFQIFYLKRLF 193

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
Match: C6T0D5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.195e-70
Identity = 131/144 (90.97%), Postives = 134/144 (93.06%), Query Frame = 1

Query:    1 FTATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            FT TS  GN V +IKGTSGDKF FKAP HGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYL+ARDARHRHTNEST  RV+FYTVGEYLLLAAVS LQVIYIRRLFSKSVAYNRV
Sbjct:   67 FTVTSAAGNTVHNIKGTSGDKFSFKAPTHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVVFYTVGEYLLLAAVSALQVIYIRRLFSKSVAYNRV 210

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
Match: C6SVC0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.932e-70
Identity = 130/144 (90.28%), Postives = 133/144 (92.36%), Query Frame = 1

Query:    1 FTATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            FT T+  GN V  IKGTSGDKF FKAP HGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYL+ARDARHRHTNEST  RV+FYTVGEYLLLAAVS LQVIYIRRLFSKSVAYNRV
Sbjct:   67 FTVTTAAGNTVHSIKGTSGDKFSFKAPSHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDARHRHTNESTRKRVVFYTVGEYLLLAAVSALQVIYIRRLFSKSVAYNRV 210

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
Match: Q9LIL4_ARATH (AT3g22845/MWI23_22 OS=Arabidopsis thaliana GN=At3g22845 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.615e-67
Identity = 123/144 (85.42%), Postives = 132/144 (91.67%), Query Frame = 1

Query:    1 FTATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            FT TSP GN+VQ +KGTSGDKF+FKAP  GMYKFCFHNPYSTPETVSFYIHVGHIP+EHDLAKDEHLDP+NVKIAELREALESV AEQKYL+ARD RHRHTNEST  RVIFYTVGEY+ LAA S LQV+YIR+LFSKSVAYNRV
Sbjct:   71 FTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVIFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
Match: B9HUQ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821950 PE=3 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.700e-67
Identity = 124/144 (86.11%), Postives = 132/144 (91.67%), Query Frame = 1

Query:    1 FTATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            FTATSPG N V  +KGTSGDKF+FKAP  GMYKFCFHNPY+TPETVSFYIHVGHIPSEHDLAKDEHL+P+NVKIAELREALESVTAEQ+YL+ARD RHRHTNEST  RVI YTVGEYLLLAA S LQV+YIRRLFSKSVAYNRV
Sbjct:   68 FTATSPGDNTVHTVKGTSGDKFEFKAPRSGMYKFCFHNPYATPETVSFYIHVGHIPSEHDLAKDEHLNPVNVKIAELREALESVTAEQRYLKARDIRHRHTNESTRRRVIAYTVGEYLLLAAASTLQVVYIRRLFSKSVAYNRV 211

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
Match: D7L2G0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479795 PE=4 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.047e-66
Identity = 122/144 (84.72%), Postives = 131/144 (90.97%), Query Frame = 1

Query:    1 FTATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            FT TSP GN+VQ +KGTSGDKF+FKAP  GMYKFCFHNPYSTPETVSFYIHVGHIP+EHDLAKDEHLDP+NVKIAELREALESV AEQKYL+ARD RHRHTNEST  RVI YTVGEY+ LAA S LQV+YIR+LFSKSVAYNRV
Sbjct:   71 FTVTSPAGNIVQTLKGTSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVILYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
Match: D7T744_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018049001 PE=4 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.280e-64
Identity = 121/144 (84.03%), Postives = 129/144 (89.58%), Query Frame = 1

Query:    1 FTATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            FT TSP GN V  +KGTSGDKF+FKAP  GMYKFCF N Y+TPETVSFYIHVGHIP+EH+LAKDEHLDPINVKIAELREALESVTAEQKYL+ARD RHRHTNEST  RVIFYT+GEYLLLA  S LQV+YIRRLFSKSVAYNRV
Sbjct:   72 FTVTSPAGNTVHTLKGTSGDKFEFKAPRSGMYKFCFQNSYATPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRKRVIFYTLGEYLLLALASGLQVVYIRRLFSKSVAYNRV 215

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
Match: B9RTJ5_RICCO (Coated vesicle membrane protein, putative OS=Ricinus communis GN=RCOM_0911000 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.724e-64
Identity = 121/143 (84.62%), Postives = 128/143 (89.51%), Query Frame = 1

Query:    4 TATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            T TSP  NVV  +KGTSGDKF+FKAP  GMYKFCFHNPYSTPETVSFYIHVGHIP+ HDLAKDEHL+PINVKIAELREALESVTAEQKYL+ARDARHR TNEST  RVI YTVGEY+LL  VS LQV+YIRRLFSKSVAYNRV
Sbjct:   68 TVTSPADNVVHTVKGTSGDKFEFKAPRSGMYKFCFHNPYSTPETVSFYIHVGHIPNAHDLAKDEHLNPINVKIAELREALESVTAEQKYLKARDARHRRTNESTRKRVIGYTVGEYILLGLVSTLQVVYIRRLFSKSVAYNRV 210

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
Match: B9FBS2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_12539 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.669e-62
Identity = 114/144 (79.17%), Postives = 125/144 (86.81%), Query Frame = 1

Query:    1 FTATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            F  TSPGGN V  +KG SGDKF+FKAP  GMYKFCFHNPY  PETVSFYIHVGHIP+EH+LAKDEHLDPINVKIAEL+EALESVTAEQKYL+AR+ARHRHTNEST  RV+FYT+ EYL     S LQV+YIRRLFSK+VAYNRV
Sbjct:   78 FVVTSPGGNTVYTLKGKSGDKFEFKAPRGGMYKFCFHNPYGAPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELKEALESVTAEQKYLKAREARHRHTNESTRRRVMFYTIAEYLAFMGASALQVVYIRRLFSKNVAYNRV 221

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
Match: Q84MP2_ORYSJ (Emp24/gp25L/p24 family protein, expressed OS=Oryza sativa subsp. japonica GN=OSJNBb0036F07.15 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.486e-62
Identity = 114/143 (79.72%), Postives = 125/143 (87.41%), Query Frame = 1

Query:    4 TATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            T TSPGGN V  +KG SGDKF+FKAP  GMYKFCFHNPY  PETVSFYIHVGHIP+EH+LAKDEHLDPINVKIAEL+EALESVTAEQKYL+AR+ARHRHTNEST  RV+FYT+ EYL     S LQV+YIRRLFSK+VAYNRV
Sbjct:   68 TVTSPGGNTVYTLKGKSGDKFEFKAPRGGMYKFCFHNPYGAPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELKEALESVTAEQKYLKAREARHRHTNESTRRRVMFYTIAEYLAFMGASALQVVYIRRLFSKNVAYNRV 210

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
Match: A2XLX1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13477 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.486e-62
Identity = 114/143 (79.72%), Postives = 125/143 (87.41%), Query Frame = 1

Query:    4 TATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            T TSPGGN V  +KG SGDKF+FKAP  GMYKFCFHNPY  PETVSFYIHVGHIP+EH+LAKDEHLDPINVKIAEL+EALESVTAEQKYL+AR+ARHRHTNEST  RV+FYT+ EYL     S LQV+YIRRLFSK+VAYNRV
Sbjct:   68 TVTSPGGNTVYTLKGKSGDKFEFKAPRGGMYKFCFHNPYGAPETVSFYIHVGHIPNEHNLAKDEHLDPINVKIAELKEALESVTAEQKYLKAREARHRHTNESTRRRVMFYTIAEYLAFMGASALQVVYIRRLFSKNVAYNRV 210

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TAIR peptide
Match: AT3G22845.1 (| Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr3:8087373-8088550 FORWARD LENGTH=214)

HSP 1 Score: 259.61 bits (662), Expect = 1.111e-69
Identity = 123/144 (85.42%), Postives = 132/144 (91.67%), Query Frame = 1

Query:    1 FTATSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            FT TSP GN+VQ +KGTSGDKF+FKAP  GMYKFCFHNPYSTPETVSFYIHVGHIP+EHDLAKDEHLDP+NVKIAELREALESV AEQKYL+ARD RHRHTNEST  RVIFYTVGEY+ LAA S LQV+YIR+LFSKSVAYNRV
Sbjct:   71 FTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVSFYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVIFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TAIR peptide
Match: AT3G07680.1 (| Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr3:2455627-2456652 FORWARD LENGTH=208)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-17
Identity = 47/139 (33.81%), Postives = 69/139 (49.64%), Query Frame = 1

Query:   16 PGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGHIPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSKSVAYNRV 432
            P G  + D +     K  F     G+Y+FCF N     ET+ F + +GH       AKDEH  P+  +I++L EAL ++  EQ +L A+  R    NE+   R +   + E   L   S LQV  +RRLF + +  +RV
Sbjct:   70 PTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNKSPYHETIDFDVQLGHFAYYDQHAKDEHFTPLMEQISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGASFLQVYLLRRLFERKLGMSRV 208

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TAIR peptide
Match: AT1G57620.1 (| Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr1:21342863-21344581 FORWARD LENGTH=212)

HSP 1 Score: 63.1586 bits (152), Expect = 1.527e-10
Identity = 38/139 (27.34%), Postives = 71/139 (51.08%), Query Frame = 1

Query:   10 TSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHV----GHIPSEHD-LAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSK 411
            T+P G V+   + T+  +F F     G Y  CF     +     F I++    G    + D +A+ E ++ + ++  +L  A+E++     YLR R+A  R  +E T++RV +Y++    +   VS LQ++Y+++ F K
Sbjct:   70 TAPYGTVLHHRENTTNGQFAFTTQESGTYLACFEADAKSHGNKDFSINIDWKTGIAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSRVAWYSIMSLGICIVVSGLQILYLKQYFEK 208

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TAIR peptide
Match: AT1G09580.1 (| Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr1:3104657-3106092 FORWARD LENGTH=217)

HSP 1 Score: 59.6918 bits (143), Expect = 1.688e-9
Identity = 38/139 (27.34%), Postives = 70/139 (50.36%), Query Frame = 1

Query:   10 TSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCFHNPYSTPETVSFYIHVGH-----IPSEHDLAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSK 411
            TSP GN + +++  +  +F F     G Y  CF     +    +  I++             +AK E ++ + ++I +L  A+E++     YLR R+A  R  +E T++RV +Y++    +  AVS  QV+Y+++ F K
Sbjct:   75 TSPYGNNLHNMENVTHGQFAFTTQESGNYLACFWADEKSHGNKNVSINIDWRTGIAAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSRVAWYSIMSLGVCIAVSGFQVLYLKQYFEK 213

[Close]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TAIR peptide
Match: AT1G21900.1 (| Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr1:7691165-7692327 REVERSE LENGTH=216)

HSP 1 Score: 53.5286 bits (127), Expect = 1.210e-7
Identity = 34/139 (24.46%), Postives = 68/139 (48.92%), Query Frame = 1

Query:   10 TSPGGNVVQDIKGTSGDKFQFKAPVHGMYKFCF----HNPYSTPETVSFYIHVGHIPSEHD-LAKDEHLDPINVKIAELREALESVTAEQKYLRARDARHRHTNESTHTRVIFYTVGEYLLLAAVSVLQVIYIRRLFSK 411
            TSP GN +   +  +  +F F     G Y  CF     +  + P T+     +G    + D +AK E ++ + +++  L   + S+     Y++ R+A  R  +E+T++RV ++++    +   V   Q++Y++R F K
Sbjct:   74 TSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWIDSSHHLANPITLGVDWKMGIAAKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVAWFSIMSLGVCVVVVGSQILYLKRYFHK 212

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig1704 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig1704 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
TMEDA_DICDI	6.744e-18	37.23	Transmembrane emp24 domain-containing protein A OS...	[more]
TMED2_RAT	7.457e-17	34.33	Transmembrane emp24 domain-containing protein 2 OS...	[more]
TMED2_MOUSE	7.457e-17	34.33	Transmembrane emp24 domain-containing protein 2 OS...	[more]
TMED2_HUMAN	7.457e-17	34.33	Transmembrane emp24 domain-containing protein 2 OS...	[more]
TMED2_CRIGR	7.457e-17	34.33	Transmembrane emp24 domain-containing protein 2 (F...	[more]
TMED_NEMVE	6.979e-15	30.30	Transmembrane emp24 domain-containing protein OS=N...	[more]
TMED7_HUMAN	2.932e-13	37.23	Transmembrane emp24 domain-containing protein 7 OS...	[more]
TMED2_CAEEL	8.532e-13	31.88	Suppressor/enhancer of lin-12 protein 9 OS=Caenorh...	[more]
TMEDB_DICDI	1.901e-12	32.62	Transmembrane emp24 domain-containing protein B OS...	[more]
EMP24_SCHPO	7.223e-12	30.83	Endosomal protein P24B OS=Schizosaccharomyces pomb...	[more]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6T0D5_SOYBN	1.195e-70	90.97	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SVC0_SOYBN	5.932e-70	90.28	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q9LIL4_ARATH	1.615e-67	85.42	AT3g22845/MWI23_22 OS=Arabidopsis thaliana GN=At3g...	[more]
B9HUQ9_POPTR	4.700e-67	86.11	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7L2G0_ARALY	1.047e-66	84.72	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7T744_VITVI	1.280e-64	84.03	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9RTJ5_RICCO	3.724e-64	84.62	Coated vesicle membrane protein, putative OS=Ricin...	[more]
B9FBS2_ORYSJ	2.669e-62	79.17	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q84MP2_ORYSJ	3.486e-62	79.72	Emp24/gp25L/p24 family protein, expressed OS=Oryza...	[more]
A2XLX1_ORYSI	3.486e-62	79.72	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of Cicer_arietinum_v1_Contig1704 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G22845.1	1.111e-69	85.42	\| Symbols: \| emp24/gp25L/p24 family/GOLD family p...	[more]
AT3G07680.1	1.289e-17	33.81	\| Symbols: \| emp24/gp25L/p24 family/GOLD family p...	[more]
AT1G57620.1	1.527e-10	27.34	\| Symbols: \| emp24/gp25L/p24 family/GOLD family p...	[more]
AT1G09580.1	1.688e-9	27.34	\| Symbols: \| emp24/gp25L/p24 family/GOLD family p...	[more]
AT1G21900.1	1.210e-7	24.46	\| Symbols: \| emp24/gp25L/p24 family/GOLD family p...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000348	Emp24/Gp25L/p24	PFAM	PF01105	EMP24_GP25L	coord: 4..135 score: 2
IPR009038	GOLD	PROFILE	PS50866	GOLD	coord: 1..52 score: 10
None	No IPR available	PANTHER	PTHR22811	COPII-COATED VESICLE MEMBRANE PROTEIN	coord: 1..138 score: 3.4
None	No IPR available	PANTHER	PTHR22811:SF8	COATED VESICLE MEMBRANE PROTEIN	coord: 1..138 score: 3.4
None	No IPR available	SEG	seg	seg	coord: 25..44 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig1704 ID=Cicer_arietinum_v1_Contig1704; Name=Cicer_arietinum_v1_Contig1704; organism=Cicer arietinum; type=contig; length=676bp
TTCACGGCAACATCTCCTGGCGGTAATGTTGTGCAAGATATCAAGGGAAC
CTCAGGAGACAAGTTTCAATTTAAGGCCCCAGTACACGGAATGTATAAAT
TTTGTTTCCATAACCCTTACTCGACACCTGAGACTGTTTCTTTCTATATC
CATGTTGGTCATATTCCCTCTGAGCATGACCTTGCCAAAGATGAGCATTT
GGACCCAATCAATGTTAAAATTGCTGAGCTCAGAGAGGCACTGGAATCTG
TTACAGCCGAACAAAAGTACTTGAGAGCCCGTGATGCAAGGCATCGCCAC
ACAAACGAGAGTACACATACACGTGTTATTTTCTACACCGTGGGAGAGTA
CCTTCTGTTGGCTGCTGTTAGTGTACTGCAAGTCATATACATCAGGCGCC
TTTTCAGCAAATCAGTGGCTTACAACCGTGTTTGAGTCATTAACCTTATG
CTTTCCTTCTTTAGTTAAATTAATTAAAGGGGTAGTCAGGGTTTTCGACA
TGTTTTCTCTGTGAAACAATATTATATAGTTATTATATTCATGGTGAACA
CTTGTTTTTCTCTGTCCGACACAGACTTTACTTGTATTTTGATACAAGGT
TTTTAAAATTCCTTGGTCTGAATAGTAGTGGATTTTAACTGAAAATTAAA
TCGTGTGGGAGCAATACTTCGTATGT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR000348	Emp24/Gp25L/p24
IPR009038	GOLD_dom

Search form

Cicer_arietinum_v1_Contig1704