Cicer_arietinum_v1_Contig172

Contig Overview
NameCicer_arietinum_v1_Contig172
Unique NameCicer_arietinum_v1_Contig172
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length738
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
HO065560ESTHO065560:1..285 +
HO066163ESTHO066163:5..738 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO065560HO065560Cicer arietinumEST
HO066163HO066163Cicer arietinumEST


Homology
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BLAST of Cicer_arietinum_v1_Contig172 vs. TrEMBL
Match: Q8GUS4_9FABA (Dehydrin 1 OS=Cicer pinnatifidum PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.685e-16
Identity = 66/170 (38.82%), Postives = 67/170 (39.41%), Query Frame = -1 
Query:  232 LGMTGEXGRTFENPGLTGPHEPHKHGDNSKSXXPSY----------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKIFGXTDDXGNHHGVDQXPXDYGXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXKVGQEFGREXAHXHXXXXXXXXXXGIMDKIKEKLPGPG 711
            +GMTGE GRTFENPGLTG        DNSKS   SY          G                             GKIFG TDD GNHHGVDQ   DYG                                KVGQEFGRE    H          GIMDKIKEKLPG G
Sbjct:   38 VGMTGEAGRTFENPGLTG-------HDNSKSHTTSYGTHTGSGGGTGDGYGTYNTRGGGDGGTYNTRGGSGMTGEVGKIFGTTDDTGNHHGVDQTTTDYG------THNTGSYGTHTGGYGNTNTGSGYGNTKVGQEFGREEPRHHGGEQQHGEKKGIMDKIKEKLPGTG 194

HSP 2 Score: 23.0978 bits (48), Expect = 1.685e-16
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = -3 
Query:  707 NPINQSGVG 733
            NPINQSGVG
Sbjct:   31 NPINQSGVG 39
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig172 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
Q8GUS4_9FABA1.685e-1638.82Dehydrin 1 OS=Cicer pinnatifidum PE=2 SV=1[more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 19..34
score: NAcoord: 42..79
score: NAcoord: 97..133
score
NoneNo IPR availableSEGsegsegcoord: 28..53
score
NoneNo IPR availableSEGsegsegcoord: 1..7
score: NAcoord: 16..27
score: NAcoord: 33..55
score: NAcoord: 88..113
score
NoneNo IPR availableSEGsegsegcoord: 35..75
score: NAcoord: 93..125
score: NAcoord: 138..151
score
NoneNo IPR availableSEGsegsegcoord: 25..29
score: NAcoord: 36..48
score: NAcoord: 67..106
score: NAcoord: 147..156
score
IPR000167DehydrinPFAMPF00257Dehydrincoord: 112..162
score: 3.3
IPR000167DehydrinPROSITEPS00823DEHYDRIN_2coord: 155..162
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig172 ID=Cicer_arietinum_v1_Contig172; Name=Cicer_arietinum_v1_Contig172; organism=Cicer arietinum; type=contig; length=738bp
ANAAACGAACATGNATATTTTATTCATATCCATTATTATACTCCATACAT
ATATCTAATTTCTATGACATGNTAATAACAAACATTACATACATATACAA
AGNAAATTACTCAAAACTAAAACTTTCAAAATAAACCAATACACACCTAT
TTTTTATTTAATTATTATATATCATATCATATGNATGNATCCATATTATA
GATATTATTATTATGATTATGATATCTAGGGGCCTGGCCCAGGAAGTTTC
TCCTTAATCTTATCCATAATCCCTTTCTTCTCTCCANGNTTTTGCTCNCC
NCCATGANGATGAGCCNCCTCTCTCCCAAATTCTTGNCCCACTTTTGNTC
CATAACCACTTCCAGGGNTTGGGNTTCCATAACCACCTGGGNNGGNCCCA
TAACTACCTGGGNNGGNCCCATAACTACCTGGGNTGGGGGNCCCATAATC
TGNTGGGGNTTGATCAACTCCATGATGATTACCGGNATCATCAGTTGNTC
CAAATATTTTACCGACTGNACCGGNCATTCCACCACCACCACCATGGGNA
TTGGAGGNCCCATAATCATCTCCAGGGNCACCACCACTACCTGNGNGGGN
CCCATAACTAGGGGNGNGGGATTTTGAATTATCTCCATGTTTATGNGGCT
CATGGGGACCGGTTAAACCGGGATTTTCAAATGTTCTACCGGNTTCACCG
GTCATCCCCAACACCACTTTGATTTATTGGGTTGGCAT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0009415response to water
Vocabulary: INTERPRO
TermDefinition
IPR000167Dehydrin