Cicer_arietinum_v1_Contig1752

Contig Overview
NameCicer_arietinum_v1_Contig1752
Unique NameCicer_arietinum_v1_Contig1752
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length503
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR403532ESTGR403532:22..355 +
GR405147ESTGR405147:1..481 -
HO062307ESTHO062307:34..421 -
HO065185ESTHO065185:35..451 +
HO063820ESTHO063820:15..501 +
GR394425ESTGR394425:118..505 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR403532GR403532Cicer arietinumEST
GR405147GR405147Cicer arietinumEST
HO062307HO062307Cicer arietinumEST
HO065185HO065185Cicer arietinumEST
HO063820HO063820Cicer arietinumEST
GR394425GR394425Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig1752 vs. TrEMBL
Match: B9RMC7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079680 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.099e-14
Identity = 44/65 (67.69%), Postives = 46/65 (70.77%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G VVIAVVLFVLLSPGLLFQLPG+ RVVEFGNMQTSG+SILVH                VHI TG
Sbjct:    5 GPVVIAVVLFVLLSPGLLFQLPGKGRVVEFGNMQTSGLSILVHTIIFFALVTIFLIAIGVHIYTG 69          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TrEMBL
Match: B9GZN7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_554767 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.581e-14
Identity = 44/65 (67.69%), Postives = 46/65 (70.77%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G VVIAVVLFVLLSPGLLFQLPGR+RVVEFGNMQTS +SILVH                VHI TG
Sbjct:    5 GPVVIAVVLFVLLSPGLLFQLPGRNRVVEFGNMQTSALSILVHTIIFFGLITIFLIAIGVHIYTG 69          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TrEMBL
Match: D7SVN4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_68.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033068001 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.032e-13
Identity = 42/65 (64.62%), Postives = 45/65 (69.23%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G VVIAVVLFVLL+PGLLFQLPG +RVVEFGNMQTS +SILVH                VHI TG
Sbjct:    5 GPVVIAVVLFVLLTPGLLFQLPGNNRVVEFGNMQTSRISILVHTIIYFGLITIFLIAIGVHIYTG 69          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TrEMBL
Match: Q7X9E3_PHAVU (Putative uncharacterized protein OS=Phaseolus vulgaris PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.171e-13
Identity = 40/65 (61.54%), Postives = 43/65 (66.15%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G V+IAVVLFVLLSPGLLFQ+P R R+ EFGNMQTSG SILVH                VHI TG
Sbjct:    5 GPVIIAVVLFVLLSPGLLFQIPSRGRIAEFGNMQTSGASILVHAVIYFGLITIFLIAIGVHIYTG 69          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TrEMBL
Match: B9RBG4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1676560 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.754e-13
Identity = 40/65 (61.54%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G VVIAVVLFV+LSPG+LFQLPG SRVVEF N+QTSGVS+ VH                VHI TG
Sbjct:    5 GPVVIAVVLFVVLSPGVLFQLPGNSRVVEFANLQTSGVSVFVHTIIFFGLITIFLIAIGVHITTG 69          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TrEMBL
Match: Q9SMN3_ARATH (Putative uncharacterized protein T8P19.170 OS=Arabidopsis thaliana GN=T8P19.170 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.821e-13
Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G VV+AV+LFVLL+PGLLFQ+P R RVVEFGNMQTSG SILVH                +HI TG
Sbjct:    5 GPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTIAIRLHIYTG 69          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TrEMBL
Match: B9I3T6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_662168 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.152e-12
Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G V++AVVLFVLL PGLLFQ+PGR+RVVEFGNMQTSG SI+VH                VHI  G
Sbjct:    5 GPVIVAVVLFVLLVPGLLFQIPGRNRVVEFGNMQTSGASIVVHAIIYFGLITIFLIAIGVHIYAG 69          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TrEMBL
Match: B9GMM2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_839754 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.505e-12
Identity = 41/65 (63.08%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G VVIAVVLFVLLSPG LFQ PGR RVVEFGNMQTSG++ILVH                V+I TG
Sbjct:    1 GPVVIAVVLFVLLSPGSLFQFPGRRRVVEFGNMQTSGIAILVHTIIFFGLITIFLVVIGVNIYTG 65          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TrEMBL
Match: B9RAD9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1505770 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.566e-12
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G V+IAV+LFVLL+PGLLFQ+PGR+RVVEFGNM TSG SI+VH                +HI  G
Sbjct:    5 GPVIIAVILFVLLTPGLLFQIPGRNRVVEFGNMHTSGASIVVHAIIYFGLITILLIAIGIHIYAG 69          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TrEMBL
Match: B9IFD5_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_252740 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.566e-12
Identity = 35/43 (81.40%), Postives = 40/43 (93.02%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVH 183
            G V++AVVLFVLL+PGLLFQ+PG+SRVVEFGNMQTSG SI VH
Sbjct:    5 GPVIVAVVLFVLLTPGLLFQIPGKSRVVEFGNMQTSGASIAVH 47          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TAIR peptide
Match: AT3G48660.1 (| Symbols: | Protein of unknown function (DUF 3339) | chr3:18029659-18030133 FORWARD LENGTH=89)

HSP 1 Score: 76.6406 bits (187), Expect = 7.812e-15
Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G VV+AV+LFVLL+PGLLFQ+P R RVVEFGNMQTSG SILVH                +HI TG
Sbjct:    5 GPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTIAIRLHIYTG 69          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TAIR peptide
Match: AT5G63500.1 (| Symbols: | Protein of unknown function (DUF 3339) | chr5:25423460-25423669 FORWARD LENGTH=69)

HSP 1 Score: 72.7886 bits (177), Expect = 1.128e-13
Identity = 38/65 (58.46%), Postives = 43/65 (66.15%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G V+IAV+LFV+LSPGLLFQ+P   RVVEFGNMQTSG SILVH                VHI +G
Sbjct:    5 GPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTIAINVHIYSG 69          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TAIR peptide
Match: AT5G40980.1 (| Symbols: | Protein of unknown function (DUF 3339) | chr5:16414877-16415086 REVERSE LENGTH=69)

HSP 1 Score: 72.7886 bits (177), Expect = 1.128e-13
Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVH 183
            G V++AV LF+LLSPGLLFQLP R+RV+EFGNM TSG+SILVH
Sbjct:    6 GPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVH 48          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TAIR peptide
Match: AT3G27027.1 (| Symbols: | Protein of unknown function (DUF 3339) | chr3:9971921-9972130 FORWARD LENGTH=69)

HSP 1 Score: 71.633 bits (174), Expect = 2.513e-13
Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVH 183
            G V++AV LF+LLSPGLLFQLP R+RVVEFGNM TSG++ILVH
Sbjct:    6 GPVIVAVSLFILLSPGLLFQLPARTRVVEFGNMTTSGIAILVH 48          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TAIR peptide
Match: AT3G01940.1 (| Symbols: | Protein of unknown function (DUF 3339) | chr3:322841-323053 REVERSE LENGTH=70)

HSP 1 Score: 68.1662 bits (165), Expect = 2.779e-12
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVH 183
            G V +AVVLFV+LSPGLLFQLP R RV+E GNM TSG+SILVH
Sbjct:    7 GPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVH 49          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TAIR peptide
Match: AT5G08391.1 (| Symbols: | Protein of unknown function (DUF 3339) | chr5:2699357-2699566 FORWARD LENGTH=69)

HSP 1 Score: 67.781 bits (164), Expect = 3.629e-12
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            G V++ V+LFV+L+PGLLFQLPGR + VEFGN QTS VS++VH                +HI  G
Sbjct:    5 GPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLLALKIHIYIG 69          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TAIR peptide
Match: AT3G27030.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:9972508-9974225 REVERSE LENGTH=142)

HSP 1 Score: 65.855 bits (159), Expect = 1.379e-11
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVH 183
            G V +AV LFVLL+PGLL Q+PGR RVVEFG  QTSG+S++VH
Sbjct:    5 GPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVH 47          

HSP 2 Score: 59.6918 bits (143), Expect = 9.883e-10
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 1
Query:   61 VVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVHXXXXXXXXXXXXXXXXVHINTG 249
            V++ VVLFV+LSPGLLF LPG +R V+FG ++T+G +I VH                +HI TG
Sbjct:   80 VLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILILALNLHIYTG 142          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TAIR peptide
Match: AT3G01950.1 (| Symbols: | Protein of unknown function (DUF 3339) | chr3:324026-324238 FORWARD LENGTH=70)

HSP 1 Score: 62.3882 bits (150), Expect = 1.525e-10
Identity = 26/43 (60.47%), Postives = 37/43 (86.05%), Query Frame = 1
Query:   55 GSVVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVH 183
            G V+++V+ F++LSPG+LFQLPG+S+ VEFG  QTSG SI++H
Sbjct:    6 GPVLMSVIFFIVLSPGVLFQLPGKSKAVEFGGFQTSGPSIVIH 48          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TAIR peptide
Match: AT5G50660.1 (| Symbols: | Protein of unknown function (DUF 3339) | chr5:20612575-20612778 FORWARD LENGTH=67)

HSP 1 Score: 61.6178 bits (148), Expect = 2.601e-10
Identity = 28/41 (68.29%), Postives = 35/41 (85.37%), Query Frame = 1
Query:   61 VVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVH 183
            VV+A VLFV+LSPGLLFQ+PG +  V+FG M+TSG SIL+H
Sbjct:    7 VVVATVLFVVLSPGLLFQVPGNNNFVDFGKMETSGYSILLH 47          
BLAST of Cicer_arietinum_v1_Contig1752 vs. TAIR peptide
Match: AT5G50560.1 (| Symbols: | Protein of unknown function (DUF 3339) | chr5:20579233-20579436 FORWARD LENGTH=67)

HSP 1 Score: 61.6178 bits (148), Expect = 2.601e-10
Identity = 28/41 (68.29%), Postives = 35/41 (85.37%), Query Frame = 1
Query:   61 VVIAVVLFVLLSPGLLFQLPGRSRVVEFGNMQTSGVSILVH 183
            VV+A VLFV+LSPGLLFQ+PG +  V+FG M+TSG SIL+H
Sbjct:    7 VVVATVLFVVLSPGLLFQVPGNNNFVDFGKMETSGYSILLH 47          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1752 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RMC7_RICCO2.099e-1467.69Putative uncharacterized protein OS=Ricinus commun... [more]
B9GZN7_POPTR3.581e-1467.69Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SVN4_VITVI3.032e-1364.62Whole genome shotgun sequence of line PN40024, sca... [more]
Q7X9E3_PHAVU5.171e-1361.54Putative uncharacterized protein OS=Phaseolus vulg... [more]
B9RBG4_RICCO6.754e-1361.54Putative uncharacterized protein OS=Ricinus commun... [more]
Q9SMN3_ARATH8.821e-1360.00Putative uncharacterized protein T8P19.170 OS=Arab... [more]
B9I3T6_POPTR1.152e-1260.00Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GMM2_POPTR1.505e-1263.08Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9RAD9_RICCO2.566e-1256.92Putative uncharacterized protein OS=Ricinus commun... [more]
B9IFD5_POPTR2.566e-1281.40Predicted protein (Fragment) OS=Populus trichocarp... [more]
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BLAST of Cicer_arietinum_v1_Contig1752 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10
Match NameE-valueIdentityDescription
AT3G48660.17.812e-1560.00| Symbols: | Protein of unknown function (DUF 333... [more]
AT5G63500.11.128e-1358.46| Symbols: | Protein of unknown function (DUF 333... [more]
AT5G40980.11.128e-1376.74| Symbols: | Protein of unknown function (DUF 333... [more]
AT3G27027.12.513e-1376.74| Symbols: | Protein of unknown function (DUF 333... [more]
AT3G01940.12.779e-1276.74| Symbols: | Protein of unknown function (DUF 333... [more]
AT5G08391.13.629e-1249.23| Symbols: | Protein of unknown function (DUF 333... [more]
AT3G27030.11.379e-1169.77| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT3G01950.11.525e-1060.47| Symbols: | Protein of unknown function (DUF 333... [more]
AT5G50660.12.601e-1068.29| Symbols: | Protein of unknown function (DUF 333... [more]
AT5G50560.12.601e-1068.29| Symbols: | Protein of unknown function (DUF 333... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021775Protein of unknown function DUF3339PFAMPF11820DUF3339coord: 5..67
score: 1.8
NoneNo IPR availableSEGsegsegcoord: 48..63
score
NoneNo IPR availableSEGsegsegcoord: 7..20
score
NoneNo IPR availableSEGsegsegcoord: 15..30
score: NAcoord: 95..109
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1752 ID=Cicer_arietinum_v1_Contig1752; Name=Cicer_arietinum_v1_Contig1752; organism=Cicer arietinum; type=contig; length=503bp
GGTGTGTTGTGAAAGAGGAAACAAATTAAAATTAAGTACTAGAATGGCAG
ATTGGGGTCAGTGGTAATAGCAGTGGTGCTGTTTGTGTTGTTAAGTCCAG
GGTTGTTGTTTCAACTGCCAGGAAGGAGCAGAGTGGTGGAATTTGGGAAC
ATGCAAACAAGTGGTGTGTCTATTTTGGTTCATACTATCATATTTTTTGG
ACTAATTACTATATTTCTTATTGCAATTGGTGTGCATATCAACACTGGTT
AATTACTCACATCACCCAGCTTACTGATCTTTTACTCCATTGTTTTGGTT
TAAGTTTTTTTCTTACTCTGTTTGTGGTTTCAATTTGTGTTGTTCTTATT
CTCATCCTTATTTAGGGATTATTCGCTGTCACTTGTCTTCACATTGTTTA
GAAGAGTCTTTGATATTCTAAAGGGGGATAATCGTGTGGGTTTGTACTGG
GTACAAAGGAATTCATTTAAAAAATGATCATATTATGTTTACCTAATTTA
TTT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR021775DUF3339