Cicer_arietinum_v1_Contig1796

Contig Overview


Name	Cicer_arietinum_v1_Contig1796
Unique Name	Cicer_arietinum_v1_Contig1796
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	760

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR406696	EST	GR406696:1..566 +	Cicer arietinum unigene v1	n/a
HO063811	EST	HO063811:71..760 +	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR406696	GR406696	Cicer arietinum	EST
HO063811	HO063811	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
Match: RL6_MESCR (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum GN=RPL6 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.230e-30
Identity = 69/105 (65.71%), Postives = 75/105 (71.43%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQ+YVI TSTKVDIS VNV+KFDDKYF K+A                     LPQEKKDDQK VD ALLKAIE VP+LK YLGARF LK+G+KP ELVF
Sbjct:  130 VPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
Match: RL63_ARATH (60S ribosomal protein L6-3 OS=Arabidopsis thaliana GN=RPL6C PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.525e-30
Identity = 69/105 (65.71%), Postives = 77/105 (73.33%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQ+YVIGTSTKVDIS V +DKFDDKYF K A                  KK +PQ KKDDQK VD+AL+KAIE+VP+LKTYLGARF LK G+KP ELVF
Sbjct:  129 VPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
Match: RL62_ARATH (60S ribosomal protein L6-2 OS=Arabidopsis thaliana GN=RPL6B PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.525e-30
Identity = 69/105 (65.71%), Postives = 77/105 (73.33%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQ+YVIGTSTKVDIS V +DKFDDKYF K A                  KK +PQ KKDDQK VD+AL+KAIE+VP+LKTYLGARF LK G+KP ELVF
Sbjct:  129 VPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
Match: RL61_ARATH (60S ribosomal protein L6-1 OS=Arabidopsis thaliana GN=RPL6A PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.100e-29
Identity = 66/105 (62.86%), Postives = 77/105 (73.33%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQ+YVIGTSTK+DIS VN +KFDDKYF K A                  KK +PQEKK+DQKTVD+AL+K+IE+VP+LK YLGARF L  G+KP ELVF
Sbjct:  129 VPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
Match: RL6B_YEAST (60S ribosomal protein L6-B OS=Saccharomyces cerevisiae GN=RPL6B PE=1 SV=4)

HSP 1 Score: 82.4185 bits (202), Expect = 2.943e-15
Identity = 49/105 (46.67%), Postives = 59/105 (56.19%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVN  YVI TSTKV +  VNV+KF+ +YF+KE                    K +  E+ +DQK VD ALL  I+  P LK YL A F LK+G KP  L F
Sbjct:   74 VPLRRVNARYVIATSTKVSVEGVNVEKFNVEYFAKE--KLTKKEKKEANLFPEQQTKEIKTERVEDQKVVDKALLAEIKKTPLLKQYLSASFSLKNGDKPHLLKF 176

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
Match: RL6A_YEAST (60S ribosomal protein L6-A OS=Saccharomyces cerevisiae GN=RPL6A PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.844e-15
Identity = 48/105 (45.71%), Postives = 59/105 (56.19%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVN  YVI TSTKV +  VNV+KF+ +YF+KE                    K +  E+ +DQK VD AL+  I+  P LK YL A F LK+G KP  L F
Sbjct:   74 VPLRRVNARYVIATSTKVSVEGVNVEKFNVEYFAKE--KLTKKEKKEANLFPEQQNKEIKAERVEDQKVVDKALIAEIKKTPLLKQYLSASFSLKNGDKPHMLKF 176

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
Match: RL6_SCHPO (60S ribosomal protein L6 OS=Schizosaccharomyces pombe GN=rpl6 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.137e-13
Identity = 44/106 (41.51%), Postives = 61/106 (57.55%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTST-KVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VP+RRVN  YVI TS  K+D+S V+V+KF   YF+K+                   K  LP E+  DQK VD+ LL AI+++P++K YL A F L +G +P  + F
Sbjct:   91 VPIRRVNHRYVIATSAPKIDVSGVSVEKFTKAYFAKQ-KRSGPVKKDEAFFAENAPKNALPAERIADQKAVDAKLLPAIKAIPNMKEYLAASFALSNGDRPHLMKF 195

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
Match: RL6_RAT (60S ribosomal protein L6 OS=Rattus norvegicus GN=Rpl6 PE=1 SV=5)

HSP 1 Score: 74.3294 bits (181), Expect = 8.015e-13
Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDK-FDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRR +Q +VI TSTKVDIS V + K   D YF K+ P                 K  + +++K DQK VDS +L  I++VP L+ YL ++F L +G+ P +LVF
Sbjct:  194 VPLRRTHQKFVIATSTKVDISKVKIPKHLTDAYFKKK-PLRKPRHQEGEIFDTEKEKYEITEQRKADQKAVDSQILPKIKAVPQLQGYLRSQFSLTNGMYPHKLVF 298

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
Match: RL6_PIG (60S ribosomal protein L6 OS=Sus scrofa GN=RPL6 PE=2 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.157e-11
Identity = 41/106 (38.68%), Postives = 61/106 (57.55%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNV-DKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRR +Q +VI TSTK+DIS V + +   D YF K+                    + + +++K DQK VDS +L+ I++VP L+ YL + F L +G+ P +LVF
Sbjct:  180 VPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKKLRKPRHQEGEIFDTEKEKYE-ISEQRKVDQKAVDSQILRRIKAVPQLQGYLRSVFALTNGIYPHKLVF 284

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
Match: RL6_CHILA (60S ribosomal protein L6 OS=Chinchilla lanigera GN=RPL6 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.512e-11
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDK-FDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRR +Q +VI TSTK+DIS V + K   D YF K+                    + + +++K DQK VDS +L  I++VP L+ YL + F L +G+ P +LVF
Sbjct:  184 VPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDTEKERYQ-ISEQRKVDQKAVDSQILPKIKAVPQLRGYLRSVFALTNGIYPHKLVF 288

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
Match: B7FH81_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.916e-33
Identity = 77/105 (73.33%), Postives = 82/105 (78.10%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQ+YVIGTSTKVDIS VNVD  DDKYFSKEAP                 KK LPQ+KKDDQKTVD+AL+KAIESVPDLKTYLGARF LK+GVKP ELVF
Sbjct:  130 VPLRRVNQAYVIGTSTKVDISGVNVDNLDDKYFSKEAPKKKSKGEGEFFESDKEEKKALPQQKKDDQKTVDAALIKAIESVPDLKTYLGARFSLKAGVKPHELVF 234

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
Match: Q9M3Z0_CICAR (60S ribosomal protein L6 OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.281e-33
Identity = 78/105 (74.29%), Postives = 82/105 (78.10%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQSYVIGTSTKVD+S+VNVDKFDDKYFSK A                  KK LPQEKKDDQKTVDS+LLKAIE+VPDLKT LGARF LKSGVKP ELVF
Sbjct:  129 VPLRRVNQSYVIGTSTKVDVSSVNVDKFDDKYFSKVAEKKTTKGEGEFFDSEKEDKKVLPQEKKDDQKTVDSSLLKAIETVPDLKTNLGARFSLKSGVKPHELVF 233

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
Match: B7FH28_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.281e-33
Identity = 76/105 (72.38%), Postives = 82/105 (78.10%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQ+YVIGTSTKVDIS+VN DKFDDKYFSKE+                  KK LPQEKKDDQKTVD+ LLKAI+SVPDLKTYLGARF LK+GVKP ELVF
Sbjct:  129 VPLRRVNQAYVIGTSTKVDISSVNADKFDDKYFSKESQKKTKKGEGEFFEADKEDKKVLPQEKKDDQKTVDAGLLKAIDSVPDLKTYLGARFSLKAGVKPHELVF 233

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
Match: C6SWC7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.242e-32
Identity = 76/105 (72.38%), Postives = 82/105 (78.10%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQSYVIGTSTKVD+SAVNVD+FDDKYF+KEA                  K  LPQ+KKDDQKTVDSAL+KAI SVPDLKTYLGARF LK+GVKP ELVF
Sbjct:  128 VPLRRVNQSYVIGTSTKVDVSAVNVDQFDDKYFAKEAQKKKKKGEGEFFEAEKEEKSVLPQQKKDDQKTVDSALIKAIGSVPDLKTYLGARFSLKAGVKPHELVF 232

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
Match: C6TLI8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.051e-31
Identity = 74/105 (70.48%), Postives = 81/105 (77.14%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQ+YVIGTSTKVD+SAVNV+ FDDKYF KEA                  K  LPQ+KKDDQKTVD+ALLKAIESVPDLK+YLGARF LK+GVKP ELVF
Sbjct:  128 VPLRRVNQAYVIGTSTKVDVSAVNVNNFDDKYFGKEAQRKKKKGEGEFFEAEKEEKSVLPQQKKDDQKTVDAALLKAIESVPDLKSYLGARFSLKAGVKPHELVF 232

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
Match: C6SZF9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.162e-30
Identity = 73/105 (69.52%), Postives = 81/105 (77.14%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQSYVIGTSTK ++SAVNV++FDDKYF+KEA                     LPQ+KKDDQKTVDSAL+KAIESVPDLKTYLGARF LK+GVKP ELVF
Sbjct:  128 VPLRRVNQSYVIGTSTKANVSAVNVEQFDDKYFTKEAQKKKKGEGEFFEAEKEEK-SVLPQQKKDDQKTVDSALIKAIESVPDLKTYLGARFSLKAGVKPHELVF 231

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
Match: B9RHH3_RICCO (60S ribosomal protein L6 OS=Ricinus communis GN=RCOM_1526800 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.863e-29
Identity = 69/105 (65.71%), Postives = 79/105 (75.24%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQSYVI TSTKVDIS VNVDKFDDK+F+K+A                  K  LPQEKKDDQKTVD+AL+K+IE+VP+LK YL ARF LK+G+KP ELVF
Sbjct:  129 VPLRRVNQSYVIATSTKVDISGVNVDKFDDKFFAKQAEKKKKKGEGEFFEAEKDEKNVLPQEKKDDQKTVDAALIKSIEAVPELKAYLAARFSLKAGMKPHELVF 233

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
Match: D7T2W5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032041001 PE=4 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.739e-29
Identity = 68/105 (64.76%), Postives = 77/105 (73.33%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQ+Y+I TSTKVDIS VNV+KFDDKYF+KE                   K  LPQEKKDDQK VD+ L+K+IE VPDLKTYLGARF LK+G+KP ELVF
Sbjct:  102 VPLRRVNQAYIIATSTKVDISGVNVEKFDDKYFAKETQKKKKKGEGEFFEADKEEKSVLPQEKKDDQKAVDTPLIKSIEGVPDLKTYLGARFSLKAGMKPHELVF 206

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
Match: A9P9M3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821385 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.739e-29
Identity = 68/105 (64.76%), Postives = 76/105 (72.38%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQSYVIGTSTKVDIS VNV+KFDDKYF K+A                  +  LPQEKKDDQK VD+ L+K++E VPDLK YLGARF LK G+KP ELVF
Sbjct:  128 VPLRRVNQSYVIGTSTKVDISGVNVEKFDDKYFGKKAEKKKKKGEGNFFEADKEGENALPQEKKDDQKAVDAPLIKSLECVPDLKAYLGARFSLKDGMKPHELVF 232

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
Match: B9SFN3_RICCO (60S ribosomal protein L6 OS=Ricinus communis GN=RCOM_0647900 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.330e-29
Identity = 68/105 (64.76%), Postives = 77/105 (73.33%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQSYVI TSTKVDIS VN DKFDDKYF+K+A                  K  LPQEKKDDQKT+D+AL+K+IE VP+LK YL ARF LK+G+KP ELVF
Sbjct:  127 VPLRRVNQSYVIATSTKVDISGVNADKFDDKYFAKQAEKRKKKGEGEFFEAEKEEKNVLPQEKKDDQKTLDAALIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TAIR peptide
Match: AT1G74060.1 (| Symbols: | Ribosomal protein L6 family protein | chr1:27850033-27851299 REVERSE LENGTH=233)

HSP 1 Score: 131.339 bits (329), Expect = 5.474e-31
Identity = 69/105 (65.71%), Postives = 77/105 (73.33%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQ+YVIGTSTKVDIS V +DKFDDKYF K A                  KK +PQ KKDDQK VD+AL+KAIE+VP+LKTYLGARF LK G+KP ELVF
Sbjct:  129 VPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TAIR peptide
Match: AT1G74050.1 (| Symbols: | Ribosomal protein L6 family protein | chr1:27847256-27848680 REVERSE LENGTH=233)

HSP 1 Score: 131.339 bits (329), Expect = 5.474e-31
Identity = 69/105 (65.71%), Postives = 77/105 (73.33%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQ+YVIGTSTKVDIS V +DKFDDKYF K A                  KK +PQ KKDDQK VD+AL+KAIE+VP+LKTYLGARF LK G+KP ELVF
Sbjct:  129 VPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TAIR peptide
Match: AT1G18540.1 (| Symbols: | Ribosomal protein L6 family protein | chr1:6377448-6378548 REVERSE LENGTH=233)

HSP 1 Score: 129.413 bits (324), Expect = 2.080e-30
Identity = 66/105 (62.86%), Postives = 77/105 (73.33%), Query Frame = -3

Query:  198 VPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPXXXXXXXXXXXXXXXXXKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFFLKSGVKPPELVF 512
            VPLRRVNQ+YVIGTSTK+DIS VN +KFDDKYF K A                  KK +PQEKK+DQKTVD+AL+K+IE+VP+LK YLGARF L  G+KP ELVF
Sbjct:  129 VPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig1796 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig1796 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL6_MESCR	4.230e-30	65.71	60S ribosomal protein L6 OS=Mesembryanthemum cryst...	[more]
RL63_ARATH	5.525e-30	65.71	60S ribosomal protein L6-3 OS=Arabidopsis thaliana...	[more]
RL62_ARATH	5.525e-30	65.71	60S ribosomal protein L6-2 OS=Arabidopsis thaliana...	[more]
RL61_ARATH	2.100e-29	62.86	60S ribosomal protein L6-1 OS=Arabidopsis thaliana...	[more]
RL6B_YEAST	2.943e-15	46.67	60S ribosomal protein L6-B OS=Saccharomyces cerevi...	[more]
RL6A_YEAST	3.844e-15	45.71	60S ribosomal protein L6-A OS=Saccharomyces cerevi...	[more]
RL6_SCHPO	6.137e-13	41.51	60S ribosomal protein L6 OS=Schizosaccharomyces po...	[more]
RL6_RAT	8.015e-13	42.45	60S ribosomal protein L6 OS=Rattus norvegicus GN=R...	[more]
RL6_PIG	1.157e-11	38.68	60S ribosomal protein L6 OS=Sus scrofa GN=RPL6 PE=...	[more]
RL6_CHILA	1.512e-11	39.62	60S ribosomal protein L6 OS=Chinchilla lanigera GN...	[more]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FH81_MEDTR	1.916e-33	73.33	Putative uncharacterized protein OS=Medicago trunc...	[more]
Q9M3Z0_CICAR	7.281e-33	74.29	60S ribosomal protein L6 OS=Cicer arietinum PE=2 S...	[more]
B7FH28_MEDTR	7.281e-33	72.38	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SWC7_SOYBN	1.242e-32	72.38	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TLI8_SOYBN	1.051e-31	70.48	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SZF9_SOYBN	1.162e-30	69.52	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9RHH3_RICCO	2.863e-29	65.71	60S ribosomal protein L6 OS=Ricinus communis GN=RC...	[more]
D7T2W5_VITVI	3.739e-29	64.76	Whole genome shotgun sequence of line PN40024, sca...	[more]
A9P9M3_POPTR	3.739e-29	64.76	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SFN3_RICCO	8.330e-29	64.76	60S ribosomal protein L6 OS=Ricinus communis GN=RC...	[more]

BLAST of Cicer_arietinum_v1_Contig1796 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G74060.1	5.474e-31	65.71	\| Symbols: \| Ribosomal protein L6 family protein ...	[more]
AT1G74050.1	5.474e-31	65.71	\| Symbols: \| Ribosomal protein L6 family protein ...	[more]
AT1G18540.1	2.080e-30	62.86	\| Symbols: \| Ribosomal protein L6 family protein ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 7..25 score: NAcoord: 28..41 score
None	No IPR available	SEG	seg	seg	coord: 76..85 score
None	No IPR available	SEG	seg	seg	coord: 16..27 score: NAcoord: 32..49 score
None	No IPR available	SEG	seg	seg	coord: 41..59 score
IPR000915	Ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 3..107 score: 8.6
IPR000915	Ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 3..107 score: 1.9
IPR014722	Translation protein SH3-like, subgroup	GENE3D	2.30.30.30	no description	coord: 2..45 score: 9.5

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig1796 ID=Cicer_arietinum_v1_Contig1796; Name=Cicer_arietinum_v1_Contig1796; organism=Cicer arietinum; type=contig; length=760bp
AGAGATTAAATTAAAATTCATAAAATCATTAAAGAAGTTCAAAATAGCAA
AAATGCAGGAAGGAATATCTCCAATAAAATTCCAAATCCTATTAATGTAA
GCTCTTAAAGTTAAGTAAGTGCCACTATATGAACCAAATTCCATCCAAAA
AATATATAAAAAAACACAAGCATAACATTCCTCTTTTCTCCAAACTAAAA
AACTAGCTCGGGGGGCTTCACGCCTGACTTGAGAAAAAACCTGGCACCAA
GATAAGTCTTTAAGTCAGGAACACTCTCAATGGCTTTTAGCAAAGCGGAG
TCCACAGTTTTCTGGTCATCCTTCTTCTCCTGAGGCAATGTCTTTTTCTC
CGCATTCTCTGCCTCAAAGAATTCGCCTTCTCCCTTGGTCTTCTTTTTAG
GGGCTTCCTTGGAGAAGTACTTGTCATCAAATTTATCAACATTAACAGCA
GAAATATCTACTTTGGTCGATGTACCAATCACATAGGACTGATTTACACG
TCTCAAAGGAACCTCCCATTAATCTTGAAAAGGGACCAGTTAACAAAGAA
GCAAACCACAAAAAAGGAAGGCTGGCTTCAAAAAACACCAACCCCTCTTT
TCCCTTAAAATCTACCCAGCAAGAAAAAATCCGCCCCTGGTCCCCAGGAG
GTAAATGGCTGGGCCCCTGAATTACAGTAATACCCCAAGAACAAAAAAAA
TATAATATTCAAATTTTAAATCCATTATAAAGGAGGATTTCCGAATACAC
TTGGCCGATA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000915	60S_ribosomal_eL6
IPR014722	Rib_uL2_dom2

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Cicer_arietinum_v1_Contig1796