Cicer_arietinum_v1_Contig1801

Contig Overview
NameCicer_arietinum_v1_Contig1801
Unique NameCicer_arietinum_v1_Contig1801
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length790
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR406647ESTGR406647:1..382 -Cicer arietinum unigene v1n/a
GR397363ESTGR397363:77..542 +Cicer arietinum unigene v1n/a
GR407454ESTGR407454:56..543 +Cicer arietinum unigene v1n/a
GR397055ESTGR397055:35..555 +Cicer arietinum unigene v1n/a
GR397177ESTGR397177:31..628 +Cicer arietinum unigene v1n/a
GR407890ESTGR407890:310..711 -Cicer arietinum unigene v1n/a
GR396316ESTGR396316:327..679 +Cicer arietinum unigene v1n/a
HO067061ESTHO067061:401..790 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR406647GR406647Cicer arietinumEST
GR397363GR397363Cicer arietinumEST
GR407454GR407454Cicer arietinumEST
GR397055GR397055Cicer arietinumEST
GR397177GR397177Cicer arietinumEST
GR407890GR407890Cicer arietinumEST
GR396316GR396316Cicer arietinumEST
HO067061HO067061Cicer arietinumEST


Homology
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BLAST of Cicer_arietinum_v1_Contig1801 vs. TrEMBL
Match: O65745_CICAR (Putative uncharacterized protein OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.173e-22
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = -2 
Query:  520 MATVEVVSAKTALSEDTAELSLVSDEKKSEEIVESPIIAAASETKEKETVVEFSAEETKPL 702
            MATVEVVSAKTALSEDTAELSLVSDEKKSEEIVESPIIAAASETKEKETVVE SAEETKPL
Sbjct:    1 MATVEVVSAKTALSEDTAELSLVSDEKKSEEIVESPIIAAASETKEKETVVESSAEETKPL 61
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1801 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
O65745_CICAR2.173e-2298.36Putative uncharacterized protein OS=Cicer arietinu... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 15..41
score
NoneNo IPR availableSEGsegsegcoord: 20..90
score
NoneNo IPR availableSEGsegsegcoord: 1..42
score: NAcoord: 48..71
score: NAcoord: 75..94
score
NoneNo IPR availableSEGsegsegcoord: 76..109
score: NAcoord: 111..145
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1801 ID=Cicer_arietinum_v1_Contig1801; Name=Cicer_arietinum_v1_Contig1801; organism=Cicer arietinum; type=contig; length=790bp
CTTAGAACACTAACAATATAGATATTTATTTGAACAAACAAAGACATATA
TAATTACTGAAAATGTGACATTGGATAAATTAAAATGGATCCATCCATCC
CCATACATTTAGCTAGTAGTACTACATTATATTATTAGCTATATTTATTG
GTGAGACCACAAACAAGTAACAAGAAAAAGACACATAAAGTAACATGACA
TGAAACTTAAAAATTATTAATCATGTTCTCTAATTAAACATTTTACATAA
ACCACATATTTTCCCCTTTACTCACTCTTCTCAATTGGAGTCTCAGTGTT
GATGATAACTTTTTCCTCTTTCTTTTCATCTAAAGCTTCTTCTTCTGCAT
CAACCTTTTCCTCACTTTTCTCTTCTGAGGCTTCTTCCGCCTCAGCTATC
ACCTTCTCTTCTTTACCAACATCTTCTGTCTCAAATTCTTCAACAAAATC
AACATTTTCTTTTGTTTCCTCTTCTTTGTCTTTCACTGTCACAACTTCTT
CTACCTTCTCAGCTTCATCCAATGGCTTGGTTTCTTCAGCTGAAAATTCA
ACAACAGTTTCTTTTTCTTTGGTTTCTGATGCTGCAGCTATAATTGGACT
TTCAACAATTTCTTCACTCTTTTTCTCATCAGATACCAATGATAATTCAG
CCGTGTCTTCGGAGAGTGCTGTCTTTGCTGATACAACCTCGACAGTGGCC
ATAATTGGAATAAAAAAAATGCACTTGTTTCTCAAAGAAGAAAGTTAAGA
GTTGTATAGGAAACTATGCTTTTGTTTGATCCCCGCGTAC
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