Cicer_arietinum_v1_Contig1835

Contig Overview
NameCicer_arietinum_v1_Contig1835
Unique NameCicer_arietinum_v1_Contig1835
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length509
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR407384ESTGR407384:79..203 +Cicer arietinum unigene v1n/a
GR397063ESTGR397063:17..419 +Cicer arietinum unigene v1n/a
GR407294ESTGR407294:65..385 +Cicer arietinum unigene v1n/a
GR406438ESTGR406438:83..373 +Cicer arietinum unigene v1n/a
FE671284ESTFE671284:204..442 -Cicer arietinum unigene v1n/a
GR406165ESTGR406165:1..500 +Cicer arietinum unigene v1n/a
GR393559ESTGR393559:20..509 -Cicer arietinum unigene v1n/a
GR392776ESTGR392776:59..507 -Cicer arietinum unigene v1n/a
GR408074ESTGR408074:66..509 -Cicer arietinum unigene v1n/a
GR407412ESTGR407412:78..509 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR407384GR407384Cicer arietinumEST
GR397063GR397063Cicer arietinumEST
GR407294GR407294Cicer arietinumEST
GR406438GR406438Cicer arietinumEST
FE671284FE671284Cicer arietinumEST
GR406165GR406165Cicer arietinumEST
GR393559GR393559Cicer arietinumEST
GR392776GR392776Cicer arietinumEST
GR408074GR408074Cicer arietinumEST
GR407412GR407412Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. SwissProt
Match: RS29_ARATH (40S ribosomal protein S29 OS=Arabidopsis thaliana GN=RPS29A PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 4.329e-27
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct:    1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. SwissProt
Match: RS29_WHEAT (40S ribosomal protein S29 OS=Triticum aestivum GN=RPS29 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.806e-26
Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSNVWNSHPK YG GSR CRVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIKYR
Sbjct:    1 MGHSNVWNSHPKNYGAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. SwissProt
Match: RS29_GRIJA (40S ribosomal protein S29 OS=Griffithsia japonica GN=RPS29 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.005e-20
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGH N+W SHP+ YG GSR+C++CGN HGLIRKY +  CRQCFR  AK+IGFIKYR
Sbjct:    1 MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. SwissProt
Match: RS29_IXOSC (40S ribosomal protein S29 OS=Ixodes scapularis GN=RpS29 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.798e-18
Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = -1 
Query:  270 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 431
            MGH N+W SHP+ YGPGSR CRVC N HGLIRKYGL  CR+CFR  A +IGF K
Sbjct:    1 MGHENIWYSHPRKYGPGSRYCRVCANHHGLIRKYGLNICRRCFRQYAADIGFKK 54
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. SwissProt
Match: RS29_GUITH (40S ribosomal protein S29A OS=Guillardia theta GN=rps29A PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 8.183e-18
Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            M H N+WN H +TYG GSR CR+CGN  GLIRKYGL  CRQCFR  ++ +GF KYR
Sbjct:    1 MSHKNIWNKHSRTYGKGSRGCRICGNRSGLIRKYGLSICRQCFREKSQNLGFDKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. SwissProt
Match: RS29_PLUXY (40S ribosomal protein S29 OS=Plutella xylostella GN=RpS29 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.069e-17
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = -1 
Query:  270 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 431
            MGH+N+W SHP+ YG GSR+CR C N HGLIRKYGL  CRQCFR  A +IGF K
Sbjct:    1 MGHANIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. SwissProt
Match: RS29_SPOFR (40S ribosomal protein S29 OS=Spodoptera frugiperda GN=RpS29 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.396e-17
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = -1 
Query:  270 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 431
            MGH+N+W SHP+ YG GSR+CR C N HGLIRKYGL  CRQCFR  A +IGF K
Sbjct:    1 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. SwissProt
Match: RS29_SCALT (40S ribosomal protein S29 OS=Scarabaeus laticollis GN=RpS29 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.396e-17
Identity = 37/54 (68.52%), Postives = 41/54 (75.93%), Query Frame = -1 
Query:  270 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 431
            MGH N+W SHP+ YG GSR+CR C N HGLIRKYGL  CRQCFR  A +IGF K
Sbjct:    1 MGHQNIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. SwissProt
Match: RS29_BOMMO (40S ribosomal protein S29 OS=Bombyx mori GN=RpS29 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.381e-17
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = -1 
Query:  270 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 431
            MGH+N+W SHP+ YG GSR+CR C N HGLIRKYGL  CRQCFR  A +IGF K
Sbjct:    1 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. SwissProt
Match: RS29_ASHGO (40S ribosomal protein S29 OS=Ashbya gossypii GN=RPS29 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.110e-17
Identity = 38/56 (67.86%), Postives = 41/56 (73.21%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            M H NVW SHP+ YG GSR CRVC +  GLIRKYGL  CRQCFR  A +IGF KYR
Sbjct:    1 MAHENVWFSHPRNYGKGSRQCRVCASHSGLIRKYGLNICRQCFREKANDIGFHKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TrEMBL
Match: B9R720_RICCO (40S ribosomal protein S29, putative OS=Ricinus communis GN=RCOM_1587780 PE=4 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.526e-28
Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSNVWNSHPK YGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct:    1 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TrEMBL
Match: B9GI80_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_642082 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.603e-28
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSNVWNSHPK YGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct:    1 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TrEMBL
Match: A9P9S8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572052 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.400e-28
Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSN+WNSHPK YGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct:    1 MGHSNIWNSHPKNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TrEMBL
Match: A9PAM2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.575e-28
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSN+WNSHP+ YGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct:    1 MGHSNIWNSHPRNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TrEMBL
Match: D6BQN3_9ROSI (Ribosomal protein S29 OS=Jatropha curcas PE=4 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.893e-28
Identity = 54/56 (96.43%), Postives = 54/56 (96.43%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSN WNSHPK YGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct:    1 MGHSNGWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TrEMBL
Match: Q7XZX4_ORYSJ (40S ribosomal protein S29, putative, expressed OS=Oryza sativa subsp. japonica GN=OSJNBb0094O03.12 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.292e-27
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSNVWNSHPK YGPGSR CRVCGNPHGLIRKYGLMCCRQCFRSNAK+IGFIKYR
Sbjct:    1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TrEMBL
Match: A2ZG71_ORYSI (40S ribosomal protein S29 OS=Oryza sativa subsp. indica GN=OsI_36775 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.292e-27
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSNVWNSHPK YGPGSR CRVCGNPHGLIRKYGLMCCRQCFRSNAK+IGFIKYR
Sbjct:    1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TrEMBL
Match: D7TCD1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015056001 PE=4 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.759e-27
Identity = 53/54 (98.15%), Postives = 53/54 (98.15%), Query Frame = -1 
Query:  270 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 431
            MGHSNVWNSHPK YGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Sbjct:    1 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 54
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TrEMBL
Match: C5WZ69_SORBI (Putative uncharacterized protein Sb01g006720 OS=Sorghum bicolor GN=Sb01g006720 PE=4 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.413e-27
Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSNVWNSHPK YGPGSR CRVC NPHGLIRKYGLMCCRQCFRSNAK+IGFIKYR
Sbjct:    1 MGHSNVWNSHPKNYGPGSRVCRVCANPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TrEMBL
Match: B9HMY0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_202048 PE=4 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.413e-27
Identity = 52/54 (96.30%), Postives = 53/54 (98.15%), Query Frame = -1 
Query:  270 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 431
            MGHSNVWNSHPK YGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIK
Sbjct:    1 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIK 54
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TAIR peptide
Match: AT4G33865.1 (| Symbols: | Ribosomal protein S14p/S29e family protein | chr4:16233395-16234114 REVERSE LENGTH=56)

HSP 1 Score: 120.553 bits (301), Expect = 4.845e-28
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct:    1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TAIR peptide
Match: AT3G44010.1 (| Symbols: | Ribosomal protein S14p/S29e family protein | chr3:15800175-15801132 REVERSE LENGTH=56)

HSP 1 Score: 120.553 bits (301), Expect = 4.845e-28
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct:    1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
[Close]
BLAST of Cicer_arietinum_v1_Contig1835 vs. TAIR peptide
Match: AT3G43980.1 (| Symbols: | Ribosomal protein S14p/S29e family protein | chr3:15778555-15779235 REVERSE LENGTH=56)

HSP 1 Score: 120.553 bits (301), Expect = 4.845e-28
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = -1 
Query:  264 MGHSNVWNSHPKTYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 431
            MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct:    1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1835 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RS29_ARATH4.329e-2792.8640S ribosomal protein S29 OS=Arabidopsis thaliana ... [more]
RS29_WHEAT2.806e-2689.2940S ribosomal protein S29 OS=Triticum aestivum GN=... [more]
RS29_GRIJA3.005e-2069.6440S ribosomal protein S29 OS=Griffithsia japonica ... [more]
RS29_IXOSC4.798e-1870.3740S ribosomal protein S29 OS=Ixodes scapularis GN=... [more]
RS29_GUITH8.183e-1864.2940S ribosomal protein S29A OS=Guillardia theta GN=... [more]
RS29_PLUXY1.069e-1768.5240S ribosomal protein S29 OS=Plutella xylostella G... [more]
RS29_SPOFR1.396e-1768.5240S ribosomal protein S29 OS=Spodoptera frugiperda... [more]
RS29_SCALT1.396e-1768.5240S ribosomal protein S29 OS=Scarabaeus laticollis... [more]
RS29_BOMMO2.381e-1768.5240S ribosomal protein S29 OS=Bombyx mori GN=RpS29 ... [more]
RS29_ASHGO3.110e-1767.8640S ribosomal protein S29 OS=Ashbya gossypii GN=RP... [more]
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BLAST of Cicer_arietinum_v1_Contig1835 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9R720_RICCO1.526e-2898.2140S ribosomal protein S29, putative OS=Ricinus com... [more]
B9GI80_POPTR2.603e-2896.43Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9P9S8_POPTR3.400e-2894.64Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PAM2_POPTR7.575e-2892.86Putative uncharacterized protein OS=Populus tricho... [more]
D6BQN3_9ROSI9.893e-2896.43Ribosomal protein S29 OS=Jatropha curcas PE=4 SV=1[more]
Q7XZX4_ORYSJ1.292e-2794.6440S ribosomal protein S29, putative, expressed OS=... [more]
A2ZG71_ORYSI1.292e-2794.6440S ribosomal protein S29 OS=Oryza sativa subsp. i... [more]
D7TCD1_VITVI3.759e-2798.15Whole genome shotgun sequence of line PN40024, sca... [more]
C5WZ69_SORBI6.413e-2792.86Putative uncharacterized protein Sb01g006720 OS=So... [more]
B9HMY0_POPTR6.413e-2796.30Predicted protein (Fragment) OS=Populus trichocarp... [more]
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BLAST of Cicer_arietinum_v1_Contig1835 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G33865.14.845e-2892.86| Symbols: | Ribosomal protein S14p/S29e family p... [more]
AT3G44010.14.845e-2892.86| Symbols: | Ribosomal protein S14p/S29e family p... [more]
AT3G43980.14.845e-2892.86| Symbols: | Ribosomal protein S14p/S29e family p... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001209Ribosomal protein S14PFAMPF00253Ribosomal_S14coord: 22..73
score: 4.8
NoneNo IPR availableGENE3D4.10.830.10no descriptioncoord: 36..65
score: 0.0
NoneNo IPR availablePANTHERPTHR12010FAMILY NOT NAMEDcoord: 18..73
score: 1.9
NoneNo IPR availablePANTHERPTHR12010:SF2SUBFAMILY NOT NAMEDcoord: 18..73
score: 1.9

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1835 ID=Cicer_arietinum_v1_Contig1835; Name=Cicer_arietinum_v1_Contig1835; organism=Cicer arietinum; type=contig; length=509bp
CTACAAAAGATGGACGCCACATTCAATTTATAATTCTATAGCTGGATAAA
GAGAAAATGACATTAACAACACAAATATACTTCAATTTCAAAACTCAAGT
TTTATAATTGACTTAACTAAATCCCACAAAATTAACAAGTTCTTCAAAAA
TTAAAACATCCTGGCATCATTATAATTCCCAATGCAATAATCTAAAACAG
TGGACAGATAGATGCTGATCCTTCAGCAGTACTGCAACACCAAAAAGGAC
TTCAATTGTTTTAGCGATACTTAATGAAGCCAATTTCCTTGGCATTGCTA
CGGAAGCACTGCCTGCAACACATAAGTCCGTACTTCCTGATCAATCCATG
AGGGTTCCCACACACACGGCAGGTGCGAGAGCCAGGACCGTAGGTTTTGG
GGTGAGAATTCCAGACATTAGAGTGACCCATGATCGTCGATTTGCTCCTC
GGAGATTGGGGAAGATGGGGAACGCAGCAGCCTCAAAACCCTAGAAACTC
AGTCGCACC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR001209Ribosomal_uS14