Cicer_arietinum_v1_Contig192

Contig Overview


Name	Cicer_arietinum_v1_Contig192
Unique Name	Cicer_arietinum_v1_Contig192
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	489

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
FE668924	EST	FE668924:1..418 +	Cicer arietinum unigene v1	n/a
HO065252	EST	HO065252:1..489 +	Cicer arietinum unigene v1	n/a
FL518955	EST	FL518955:3..485 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
FE668924	FE668924	Cicer arietinum	EST
HO065252	HO065252	Cicer arietinum	EST
FL518955	FL518955	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
Match: PSAEB_NICSY (Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestris GN=PSAEB PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.200e-23
Identity = 50/56 (89.29%), Postives = 54/56 (96.43%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            V+VLRKESYW+ G+GSVVAVDQDP TRYPVVVRFNKVNYANVSTNNYALDE+EEVK
Sbjct:   88 VRVLRKESYWYKGVGSVVAVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVK 143

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
Match: PSAE_SPIOL (Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea GN=PSAE-1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.559e-23
Identity = 48/55 (87.27%), Postives = 54/55 (98.18%), Query Frame = -1

Query:  178 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEV 342
            V+++RKESYW+ G+GSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEI+EV
Sbjct:   70 VRIMRKESYWYKGVGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIQEV 124

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
Match: PSAE2_ARATH (Photosystem I reaction center subunit IV B, chloroplastic OS=Arabidopsis thaliana GN=PSAE2 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.016e-22
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            VK+LRKESYW+  +GSVVAVDQDPKTRYPVVVRF KVNYAN+STNNYALDE+EEVK
Sbjct:   90 VKILRKESYWYKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVK 145

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
Match: PSAEA_NICSY (Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestris GN=PSAEA PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.326e-22
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            V++LRKESYW+ G GSVVA DQDP TRYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct:   86 VRILRKESYWYKGTGSVVACDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 141

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
Match: PSAE1_ARATH (Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thaliana GN=PSAE1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.859e-22
Identity = 47/55 (85.45%), Postives = 52/55 (94.55%), Query Frame = -1

Query:  178 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEV 342
            VK+LR+ESYWF  +GSVVAVDQDPKTRYPVVVRF KVNYAN+STNNYALDE+EEV
Sbjct:   87 VKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
Match: PSAE_HORVU (Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare GN=PSAE PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 9.506e-21
Identity = 46/55 (83.64%), Postives = 50/55 (90.91%), Query Frame = -1

Query:  178 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEV 342
            VK+LR+ESYW+NG GSVV VDQDP TRYPVVVRF KVNYA VSTNNYALDEI+EV
Sbjct:   91 VKILRRESYWYNGTGSVVTVDQDPNTRYPVVVRFAKVNYAGVSTNNYALDEIKEV 145

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
Match: PSAE_GLOVI (Photosystem I reaction center subunit IV OS=Gloeobacter violaceus GN=psaE PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.618e-14
Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            V++LRKESYW+  +G+V +VD+  KT YPV VRF KVNY+ ++TNN+ + E+EEV+
Sbjct:    9 VRILRKESYWYREVGTVASVDKSEKTIYPVTVRFEKVNYSGINTNNFGVSELEEVE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
Match: PSAE_CHLRE (Photosystem I reaction center subunit IV, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAE PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.618e-14
Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            VK+LR ESYWFN +G VV+VDQ    RYPVVVRF   NYA V+TNNYALDE+   K
Sbjct:   43 VKILRPESYWFNQVGKVVSVDQSG-VRYPVVVRFENQNYAGVTTNNYALDEVVAAK 97

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
Match: PSAE_THEEB (Photosystem I reaction center subunit IV OS=Thermosynechococcus elongatus (strain BP-1) GN=psaE PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.920e-13
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = -1

Query:  178 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNY-------ANVSTNNYALDEIEEV 342
            VK+LR ESYW+N +G+V +VDQ P  +YPV+VRF+KVNY       + V+TNN+AL E++EV
Sbjct:    8 VKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEV 69

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
Match: PSAE_SYNEN (Photosystem I reaction center subunit IV OS=Synechococcus elongatus naegeli GN=psaE PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.920e-13
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = -1

Query:  178 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNY-------ANVSTNNYALDEIEEV 342
            VK+LR ESYW+N +G+V +VDQ P  +YPV+VRF+KVNY       + V+TNN+AL E++EV
Sbjct:    8 VKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEV 69

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
Match: B7FHF6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.420e-25
Identity = 67/104 (64.42%), Postives = 67/104 (64.42%), Query Frame = -1

Query:  175 YPTTTTKNPNSSRLVVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 486
            YPTT   N   SRLVVR                              KVKVLRKESYWFNGIGSVVAVDQDP TRYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct:   38 YPTTRNTN---SRLVVRASEEAAATPTVEGEAAPKTKPPPIGPKRGAKVKVLRKESYWFNGIGSVVAVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 138

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
Match: B9GRA3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa GN=POPTRDRAFT_711610 PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.100e-23
Identity = 52/56 (92.86%), Postives = 56/56 (100.00%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            VK+LRKESYWFNG+GSVVAVDQDP++RYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct:   85 VKILRKESYWFNGVGSVVAVDQDPRSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 140

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
Match: A9PCY7_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.100e-23
Identity = 52/56 (92.86%), Postives = 56/56 (100.00%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            VK+LRKESYWFNG+GSVVAVDQDP++RYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct:   55 VKILRKESYWFNGVGSVVAVDQDPRSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 110

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
Match: A8C1A6_CITSI (PS1 reaction center subunit III OS=Citrus sinensis GN=psaE PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.877e-23
Identity = 52/56 (92.86%), Postives = 56/56 (100.00%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            VK+LR+ESYW+NGIGSVVAVDQDPK+RYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct:   88 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 143

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
Match: A8C198_CITSI (PSI reaction center subunit III OS=Citrus sinensis GN=psaE PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.877e-23
Identity = 52/56 (92.86%), Postives = 56/56 (100.00%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            VK+LR+ESYW+NGIGSVVAVDQDPK+RYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct:   88 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 143

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
Match: D7U3B5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028481001 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.451e-23
Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = -1

Query:  178 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEV 342
            VK+LRKESYW+NGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEI+EV
Sbjct:   58 VKILRKESYWYNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIQEV 112

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
Match: B9S592_RICCO (Photosystem I reaction center subunit IV A, chloroplast OS=Ricinus communis GN=RCOM_1723530 PE=4 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.451e-23
Identity = 52/56 (92.86%), Postives = 56/56 (100.00%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            VK+LR+ESYW+NGIGSVVAVDQDPKTRYPVVVRF+KVNYANVSTNNYALDEIEEVK
Sbjct:   86 VKILRRESYWYNGIGSVVAVDQDPKTRYPVVVRFDKVNYANVSTNNYALDEIEEVK 141

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
Match: Q8RVJ8_POPCA (Putative photosystem I reaction centre subunit IV OS=Populus canadensis GN=psa PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 7.131e-23
Identity = 51/56 (91.07%), Postives = 54/56 (96.43%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            VK+LRKESYWFNG GSV AVDQDP++RYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct:   85 VKILRKESYWFNGFGSVAAVDQDPRSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 140

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
Match: D7L599_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899838 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.037e-22
Identity = 48/56 (85.71%), Postives = 54/56 (96.43%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            VK+LRKESYW+  +GSVVAVDQDPKTRYPVVVRF+KVNYAN+STNNYALDE+EEVK
Sbjct:   88 VKILRKESYWYKNVGSVVAVDQDPKTRYPVVVRFSKVNYANISTNNYALDEVEEVK 143

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
Match: Q8LC58_ARATH (Photosystem I reaction center subunit IV B, chloroplast (PSI-E B) OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.345e-21
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            VK+LRKESYW+  +GSVVAVDQDPKTRYPVVVRF KVNYAN+STNNYALDE+EEVK
Sbjct:   88 VKILRKESYWYKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVK 143

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TAIR peptide
Match: AT2G20260.1 (| Symbols: PSAE-2 | photosystem I subunit E-2 | chr2:8736780-8737644 FORWARD LENGTH=145)

HSP 1 Score: 105.916 bits (263), Expect = 1.137e-23
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = -1

Query:  175 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 342
            VK+LRKESYW+  +GSVVAVDQDPKTRYPVVVRF KVNYAN+STNNYALDE+EEVK
Sbjct:   90 VKILRKESYWYKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVK 145

[Close]

BLAST of Cicer_arietinum_v1_Contig192 vs. TAIR peptide
Match: AT4G28750.1 (| Symbols: PSAE-1 | Photosystem I reaction centre subunit IV / PsaE protein | chr4:14202951-14203888 REVERSE LENGTH=143)

HSP 1 Score: 103.99 bits (258), Expect = 4.323e-23
Identity = 47/55 (85.45%), Postives = 52/55 (94.55%), Query Frame = -1

Query:  178 VKVLRKESYWFNGIGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIEEV 342
            VK+LR+ESYWF  +GSVVAVDQDPKTRYPVVVRF KVNYAN+STNNYALDE+EEV
Sbjct:   87 VKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig192 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig192 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
PSAEB_NICSY	1.200e-23	89.29	Photosystem I reaction center subunit IV B, chloro...	[more]
PSAE_SPIOL	4.559e-23	87.27	Photosystem I reaction center subunit IV, chloropl...	[more]
PSAE2_ARATH	1.016e-22	85.71	Photosystem I reaction center subunit IV B, chloro...	[more]
PSAEA_NICSY	1.326e-22	87.50	Photosystem I reaction center subunit IV A, chloro...	[more]
PSAE1_ARATH	3.859e-22	85.45	Photosystem I reaction center subunit IV A, chloro...	[more]
PSAE_HORVU	9.506e-21	83.64	Photosystem I reaction center subunit IV, chloropl...	[more]
PSAE_GLOVI	8.618e-14	55.36	Photosystem I reaction center subunit IV OS=Gloeob...	[more]
PSAE_CHLRE	8.618e-14	66.07	Photosystem I reaction center subunit IV, chloropl...	[more]
PSAE_THEEB	1.920e-13	54.84	Photosystem I reaction center subunit IV OS=Thermo...	[more]
PSAE_SYNEN	1.920e-13	54.84	Photosystem I reaction center subunit IV OS=Synech...	[more]

BLAST of Cicer_arietinum_v1_Contig192 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FHF6_MEDTR	3.420e-25	64.42	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9GRA3_POPTR	1.100e-23	92.86	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PCY7_POPTR	1.100e-23	92.86	Putative uncharacterized protein OS=Populus tricho...	[more]
A8C1A6_CITSI	1.877e-23	92.86	PS1 reaction center subunit III OS=Citrus sinensis...	[more]
A8C198_CITSI	1.877e-23	92.86	PSI reaction center subunit III OS=Citrus sinensis...	[more]
D7U3B5_VITVI	2.451e-23	94.55	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9S592_RICCO	2.451e-23	92.86	Photosystem I reaction center subunit IV A, chloro...	[more]
Q8RVJ8_POPCA	7.131e-23	91.07	Putative photosystem I reaction centre subunit IV ...	[more]
D7L599_ARALY	6.037e-22	85.71	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q8LC58_ARATH	1.345e-21	85.71	Photosystem I reaction center subunit IV B, chloro...	[more]

BLAST of Cicer_arietinum_v1_Contig192 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G20260.1	1.137e-23	85.71	\| Symbols: PSAE-2 \| photosystem I subunit E-2 \| ch...	[more]
AT4G28750.1	4.323e-23	85.45	\| Symbols: PSAE-1 \| Photosystem I reaction centre ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 9..44 score: NAcoord: 47..55 score
None	No IPR available	GENE3D	2.30.30.50	no description	coord: 44..105 score: 7.1
None	No IPR available	SEG	seg	seg	coord: 19..49 score
None	No IPR available	SEG	seg	seg	coord: 1..35 score
None	No IPR available	SEG	seg	seg	coord: 13..29 score
IPR003375	Photosystem I PsaE, reaction centre subunit IV	PFAM	PF02427	PSI_PsaE	coord: 44..105 score: 1.8
IPR008990	Electron transport accessory protein	SUPERFAMILY	50090	Electron transport accessory proteins	coord: 44..105 score: 2.5

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig192 ID=Cicer_arietinum_v1_Contig192; Name=Cicer_arietinum_v1_Contig192; organism=Cicer arietinum; type=contig; length=489bp
ATGGGGGCGTAATTATTCATTTAAATTATAAACAGGGGAAGTTTAAGTTT
ATACATGTTTGATTATGAGTATCTGCACAAATTAACACAAAATATGATAT
ACACATCTTCTTTGTGACGTGAAATTAACCCTTAAACTAGTAACTTGAAA
TTACAACTAAAATAGATTGACTCATTTGACTTCCTCGATCTCATCCAAAG
CATAGTTGTTTGTTGATACATTTGCATAGTTAACTTTGTTGAATCTAACC
ACAACTGGGTAACGAGTCTTAGGATCCTGATCAACAGCAACAACTGAACC
AATACCATTGAACCAGTAGGATTCCTTCCTAAGAACCTTTACCTTAGCAC
CTCTTTTGGGGCCAATTGGTGGTGGCTTGGGTTTAGGAGCTGCTTCACCT
TCAACAGTTGGGGTTGCTGCAGCTTCCTCAGCTGCCCTGACAACAAGCCT
AGAAGAATTTGGGTTCTTTGTTGTAGTTGTAGGGTACCT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Cellular Component**
Term	Definition
GO:0009538	photosystem I reaction center
GO:0009536	plastid

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **INTERPRO**
Term	Definition
IPR003375	PSI_PsaE
IPR008990	Elect_transpt_acc-like_dom_sf

Search form

Cicer_arietinum_v1_Contig192