Cicer_arietinum_v1_Contig1926

Contig Overview
NameCicer_arietinum_v1_Contig1926
Unique NameCicer_arietinum_v1_Contig1926
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length699
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR399662ESTGR399662:1..688 -
HO214268ESTHO214268:575..699 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR399662GR399662Cicer arietinumEST
HO214268HO214268Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig1926 vs. TrEMBL
Match: B1PIF3_9CONI (Putative senescence-associated protein (Fragment) OS=Cupressus sempervirens PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.128e-8
Identity = 29/46 (63.04%), Postives = 31/46 (67.39%), Query Frame = -2 
Query:  405 ELNYYCDDKMKIFSIHQ*GKTNLPHDGLNPAHVPY*RGNNQTLGEF 542
            +LNYY        + HQ GKTNL HDGLNPAHVPY   NN TLGEF
Sbjct:    2 KLNYYRG------ADHQQGKTNLSHDGLNPAHVPYWWVNNPTLGEF 41

HSP 2 Score: 29.6462 bits (65), Expect = 1.128e-8
Identity = 17/38 (44.74%), Postives = 20/38 (52.63%), Query Frame = -3 
Query:  299 GNSCFTMIGRSNFEEIKRNVP*KNLAAQTNLNPSGNLS 412
            G  CFTMIGR++ E  K NV       Q +  P GN S
Sbjct:   39 GEFCFTMIGRADIEGSKSNVAMNAWLPQASY-PCGNFS 75
[Close]
BLAST of Cicer_arietinum_v1_Contig1926 vs. TrEMBL
Match: Q9AVH2_PEA (Putative senescence-associated protein (Fragment) OS=Pisum sativum GN=ssa-13 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 2.212e-8
Identity = 28/37 (75.68%), Postives = 29/37 (78.38%), Query Frame = -1 
Query:  523 SHIPTDGSFASLAFQLNAFTNYLNQRFLSY*VELLLR 633
            SH PT GSFA LAFQ +A TN  NQRFLSY VELLLR
Sbjct:   18 SHNPTHGSFAPLAFQPSAMTNCANQRFLSYYVELLLR 54

HSP 2 Score: 29.6462 bits (65), Expect = 2.212e-8
Identity = 17/38 (44.74%), Postives = 20/38 (52.63%), Query Frame = -3 
Query:  299 GNSCFTMIGRSNFEEIKRNVP*KNLAAQTNLNPSGNLS 412
            G  CFTMIGR++ E  K NV       Q +  P GN S
Sbjct:   85 GEFCFTMIGRADIEGSKSNVAMNAWLPQASY-PCGNFS 121
[Close]
BLAST of Cicer_arietinum_v1_Contig1926 vs. TrEMBL
Match: C1NAM8_MICPS (Predicted protein (Fragment) OS=Micromonas pusilla CCMP1545 GN=MICPUCDRAFT_23888 PE=4 SV=1)

HSP 1 Score: 40.817 bits (94), Expect = 5.640e-7
Identity = 21/33 (63.64%), Postives = 22/33 (66.67%), Query Frame = 3 
Query:  531 VIQLSTRGTVDSDNW*MHLAEKLVMRSYHL*EY 629
            VIQ STRGTVDS NW   L EK V RSY   +Y
Sbjct:   22 VIQPSTRGTVDSHNWSSRLVEKPVARSYRALDY 54

HSP 2 Score: 37.7354 bits (86), Expect = 5.640e-7
Identity = 16/19 (84.21%), Postives = 17/19 (89.47%), Query Frame = 2 
Query:  416 VFDCSPSNMERELGLDRRE 472
            V DCSP+N ERELGLDRRE
Sbjct:    2 VLDCSPTNRERELGLDRRE 20
[Close]
BLAST of Cicer_arietinum_v1_Contig1926 vs. TrEMBL
Match: A8DWN7_NEMVE (Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g157504 PE=4 SV=1)

HSP 1 Score: 40.0466 bits (92), Expect = 9.497e-7
Identity = 18/22 (81.82%), Postives = 19/22 (86.36%), Query Frame = 3 
Query:  531 VIQLSTRGTVDSDNW*MHLAEK 596
            VI LSTRGT DSDNW +HLAEK
Sbjct:   22 VILLSTRGTADSDNWHLHLAEK 43

HSP 2 Score: 37.7354 bits (86), Expect = 9.497e-7
Identity = 16/19 (84.21%), Postives = 17/19 (89.47%), Query Frame = 2 
Query:  416 VFDCSPSNMERELGLDRRE 472
            V DCSP+N ERELGLDRRE
Sbjct:    2 VLDCSPTNRERELGLDRRE 20
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1926 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B1PIF3_9CONI1.128e-863.04Putative senescence-associated protein (Fragment) ... [more]
Q9AVH2_PEA2.212e-875.68Putative senescence-associated protein (Fragment) ... [more]
C1NAM8_MICPS5.640e-763.64Predicted protein (Fragment) OS=Micromonas pusilla... [more]
A8DWN7_NEMVE9.497e-781.82Predicted protein (Fragment) OS=Nematostella vecte... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1926 ID=Cicer_arietinum_v1_Contig1926; Name=Cicer_arietinum_v1_Contig1926; organism=Cicer arietinum; type=contig; length=699bp
TTAATAATTAATTTTATGTACTGTTCTTGCTTTAATGACTATTAAAGAAA
TCATTTATTTATATGTTTTATTTTACATATATTGTTTTGGGCTAGTTTTT
TAATAATTAATGTGTTGACATCCTTTATTAGTTATGTCTATATAAATAAA
CCATAATTGTACTTTTATGATTTCATATAAGTAAAAACGCCCCTTTTGGT
TTTAATATTATCATTTATAAATACAAAAATCAAGAATGGACTTAGGCTCA
TTGTTCTCTTTAACCCAATTTGTAAAGTTTCTCACCTTTGTGGAGTTTCG
ATAAATTTCCACTAGGGTTTAAATTTGTTTGAGCAGCCAAGTTTTTTTAA
GGGACGTTTCTTTTGATCTCTTCGAAGTTGGATCTTCCTATCATTGTGAA
GCAGGAATTCCCCCAGTGTTTGATTGTTCCCCCTCTAATATGGAACGTGA
GCTGGGTTTAGACCGTCGTGAGGCAGGTTAGTTTTACCCTACTGATGAAT
AGAAAAAATTTTCATTTTGTCATCGCAATAGTAATTCAACTCAGTACGAG
AGGAACCGTTGATTCAGATAATTGGTAAATGCATTTAGCTGAAAAGCTAG
TGATGCGAAGCTACCATCTGTAGGAATATGGCTGGAACGCCTCTTAAGCC
AAAATCCATGCTAAAAAAGCGATGNATGACTTTTATTTTGGAAAAAAGG
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