Cicer_arietinum_v1_Contig1934

Contig Overview
NameCicer_arietinum_v1_Contig1934
Unique NameCicer_arietinum_v1_Contig1934
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length495
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR402778ESTGR402778:1..314 +
GR403108ESTGR403108:18..336 +
GR405947ESTGR405947:13..471 -
GR405948ESTGR405948:18..471 +
FE671650ESTFE671650:231..460 +
GR404764ESTGR404764:134..470 -
GR404292ESTGR404292:127..470 -
HO062674ESTHO062674:2..495 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR402778GR402778Cicer arietinumEST
GR403108GR403108Cicer arietinumEST
GR405947GR405947Cicer arietinumEST
GR405948GR405948Cicer arietinumEST
FE671650FE671650Cicer arietinumEST
GR404764GR404764Cicer arietinumEST
GR404292GR404292Cicer arietinumEST
HO062674HO062674Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig1934 vs. TrEMBL
Match: C6T1M7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.385e-24
Identity = 68/108 (62.96%), Postives = 79/108 (73.15%), Query Frame = -1 
Query:  127 EMEKQNLKYRGWCPSNTNNYEIHEVGEPAL-RKRLDRPRRDNKKGHVAFKTVLEEAITPLEV----AETE------RVNSFESVDRQADAFIKLEHRRIELARLKSLG 417
            +M+KQNL+YRGWCPSN  +Y++HEV  PAL RK LDRPR  ++KG VAFKT LEE+IT  E     AETE        N F SVD++ADAFIK EHRRIELA LKSLG
Sbjct:    6 QMQKQNLRYRGWCPSN--DYQVHEVIGPALLRKGLDRPR--HQKGRVAFKTDLEESITVAEPTPVPAETETPTTTNHANGFRSVDQKADAFIKQEHRRIELAGLKSLG 109
[Close]
BLAST of Cicer_arietinum_v1_Contig1934 vs. TrEMBL
Match: C6SXB6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.911e-8
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = -1 
Query:  133 MEKQNLKYRGW-CPSNTNNYEIHEVGEPALRKRLDRPRRDNKKGHVAFKTVLEEAITPLEV-AETERVNS-------FESVDRQADAFIKLEHRRIELARLKS 414
            M  QN    GW CPS+      ++V +P +     R +  +KKGHVAF+T  E++I  +E   E    NS       ++SVD++A+AFI+ EH+R+ELARL S
Sbjct:    1 MAYQNYNNYGWRCPSDE-----YQVYDPPVEATYPR-QNHHKKGHVAFRTNYEDSIAEVESNVEAREHNSRLWNHSAYKSVDQEAEAFIQYEHKRMELARLMS 97
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig1934 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
C6T1M7_SOYBN6.385e-2462.96Putative uncharacterized protein OS=Glycine max PE... [more]
C6SXB6_SOYBN4.911e-839.81Putative uncharacterized protein OS=Glycine max PE... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 46..64
score: NAcoord: 75..90
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig1934 ID=Cicer_arietinum_v1_Contig1934; Name=Cicer_arietinum_v1_Contig1934; organism=Cicer arietinum; type=contig; length=495bp
AAAAAACACAAAAGAAAAAGAGATGTTGATGTATTATTTAGGTGAAATAC
ATAAGGTTGGTAAAAATTATTGCATAAATAATAAAGGCCCTTTAGGTAGT
CTTAGAGGATATATAAATCAAGCAAACCCCAAAGACTTGAGTCTGGCAAG
TTCAATCCTCCTGTGCTCCAGCTTAATAAACGCATCAGCTTGTCGATCCA
CGCTCTCAAAAGAATTTACACGTTCAGTCTCTGCCACTTCTAGTGGTGTT
ATGGCCTCCTCTAGCACTGTTTTGAATGCCACATGACCCTTCTTATTATC
ACGTCGAGGACGATCTAGCCGCTTACGAAGTGCAGGCTCTCCTACTTCGT
GGATTTCGTAATTGTTTGTGTTGGAGGGACACCACCCTCGATATTTCAAG
TTTTGCTTTTCCATTTCCTATATTCAATTCTGTTCTGTTCTGTTCTGTTC
TGTTCTGTTTTCAAGTGGTCGCGTACCTGCCCGGGCGGCCGCTCG
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