Cicer_arietinum_v1_Contig198

Contig Overview
NameCicer_arietinum_v1_Contig198
Unique NameCicer_arietinum_v1_Contig198
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length758
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
HO065267ESTHO065267:41..201 +Cicer arietinum unigene v1n/a
EH058755ESTEH058755:10..169 +Cicer arietinum unigene v1n/a
HO065210ESTHO065210:407..509 -Cicer arietinum unigene v1n/a
GR404729ESTGR404729:313..584 +Cicer arietinum unigene v1n/a
HO065145ESTHO065145:1..748 +Cicer arietinum unigene v1n/a
GR407930ESTGR407930:96..758 -Cicer arietinum unigene v1n/a
HO065124ESTHO065124:378..753 -Cicer arietinum unigene v1n/a
GR398332ESTGR398332:437..726 -Cicer arietinum unigene v1n/a
HO065922ESTHO065922:380..755 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO065267HO065267Cicer arietinumEST
EH058755EH058755Cicer arietinumEST
HO065210HO065210Cicer arietinumEST
GR404729GR404729Cicer arietinumEST
HO065145HO065145Cicer arietinumEST
GR407930GR407930Cicer arietinumEST
HO065124HO065124Cicer arietinumEST
GR398332GR398332Cicer arietinumEST
HO065922HO065922Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. SwissProt
Match: SF13A_MOUSE (Splicing factor, arginine/serine-rich 13A OS=Mus musculus GN=Sfrs13a PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.360e-19
Identity = 42/91 (46.15%), Postives = 64/91 (70.33%), Query Frame = -2 
Query:  275 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 547
            TSL VRN+  D R +DL   F ++GP+ DVY+P D+YT  PRGF +VQ+ D  DA DA +++D + + GR++ + FA+ +RK P +M+A+E
Sbjct:   10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. SwissProt
Match: SF13A_HUMAN (Splicing factor, arginine/serine-rich 13A OS=Homo sapiens GN=SFRS13A PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.360e-19
Identity = 42/91 (46.15%), Postives = 64/91 (70.33%), Query Frame = -2 
Query:  275 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 547
            TSL VRN+  D R +DL   F ++GP+ DVY+P D+YT  PRGF +VQ+ D  DA DA +++D + + GR++ + FA+ +RK P +M+A+E
Sbjct:   10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. SwissProt
Match: SF13B_HUMAN (Splicing factor, arginine/serine-rich 13B OS=Homo sapiens GN=SFRS13B PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.667e-18
Identity = 40/91 (43.96%), Postives = 64/91 (70.33%), Query Frame = -2 
Query:  275 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 547
            TSL +RN+    RP+DL   F ++GP+ DVY+P D+YT  PRGF +VQ+ D  DA DA Y+++ + + GR++ + FA+ +RK P +M+++E
Sbjct:   10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKE 100
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. SwissProt
Match: SFRS2_RAT (Splicing factor, arginine/serine-rich 2 OS=Rattus norvegicus GN=Sfrs2 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 8.015e-13
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = -2 
Query:  305 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENR 547
            TSL V NL     PD L   F ++G + DVY+PRD YT E RGF FV++ D  DA DA   MDG +L GREL V  A   R
Sbjct:   14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. SwissProt
Match: SFRS2_PIG (Splicing factor, arginine/serine-rich 2 OS=Sus scrofa GN=SFRS2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.015e-13
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = -2 
Query:  305 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENR 547
            TSL V NL     PD L   F ++G + DVY+PRD YT E RGF FV++ D  DA DA   MDG +L GREL V  A   R
Sbjct:   14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. SwissProt
Match: SFRS2_PANTR (Splicing factor, arginine/serine-rich 2 OS=Pan troglodytes GN=SFRS2 PE=2 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 8.015e-13
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = -2 
Query:  305 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENR 547
            TSL V NL     PD L   F ++G + DVY+PRD YT E RGF FV++ D  DA DA   MDG +L GREL V  A   R
Sbjct:   14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. SwissProt
Match: SFRS2_MOUSE (Splicing factor, arginine/serine-rich 2 OS=Mus musculus GN=Sfrs2 PE=1 SV=4)

HSP 1 Score: 74.3294 bits (181), Expect = 8.015e-13
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = -2 
Query:  305 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENR 547
            TSL V NL     PD L   F ++G + DVY+PRD YT E RGF FV++ D  DA DA   MDG +L GREL V  A   R
Sbjct:   14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. SwissProt
Match: SFRS2_HUMAN (Splicing factor, arginine/serine-rich 2 OS=Homo sapiens GN=SFRS2 PE=1 SV=4)

HSP 1 Score: 74.3294 bits (181), Expect = 8.015e-13
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = -2 
Query:  305 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENR 547
            TSL V NL     PD L   F ++G + DVY+PRD YT E RGF FV++ D  DA DA   MDG +L GREL V  A   R
Sbjct:   14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. SwissProt
Match: SFRS2_CHICK (Splicing factor, arginine/serine-rich 2 OS=Gallus gallus GN=SFRS2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.015e-13
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = -2 
Query:  305 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENR 547
            TSL V NL     PD L   F ++G + DVY+PRD YT E RGF FV++ D  DA DA   MDG +L GREL V  A   R
Sbjct:   14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. SwissProt
Match: SFRS2_BOVIN (Splicing factor, arginine/serine-rich 2 OS=Bos taurus GN=SFRS2 PE=2 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 8.015e-13
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = -2 
Query:  305 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENR 547
            TSL V NL     PD L   F ++G + DVY+PRD YT E RGF FV++ D  DA DA   MDG +L GREL V  A   R
Sbjct:   14 TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TrEMBL
Match: C6TK79_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 4.397e-46
Identity = 87/94 (92.55%), Postives = 92/94 (97.87%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL++DCRP+DLHGPF QFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDG+ILLGRE+TVVFAEENRKKP EMRARE
Sbjct:   37 DLPTSLLVRNLNRDCRPEDLHGPFGQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGRILLGREITVVFAEENRKKPAEMRARE 130
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TrEMBL
Match: C6TJA4_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.042e-43
Identity = 83/94 (88.30%), Postives = 87/94 (92.55%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL  DCRP+DL  PF QFGPLKD+YLP+DYYTGEPRGFGFVQYVDPADAADAKYHMDGQ+LLGRELTVVFAEENRKKP EMR RE
Sbjct:   38 DLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRTRE 131
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TrEMBL
Match: C6T8C8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.942e-43
Identity = 82/94 (87.23%), Postives = 87/94 (92.55%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL  DCRP+DL  PF QFGPLKD+YLP+DYYTGEPRGFGFVQ+VDPADAADAKYHMDGQ+LLGRELTVVFAEENRKKP EMR RE
Sbjct:   38 DLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQFVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRTRE 131
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TrEMBL
Match: B9T013_RICCO (Serine/arginine rich splicing factor, putative OS=Ricinus communis GN=RCOM_0036490 PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 7.761e-43
Identity = 83/94 (88.30%), Postives = 87/94 (92.55%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL  DCR +DL GPF  FGPLKD+YLPRDYYTGEPRGFGFVQYVDPADAADAK+HMDG+ILLGRELTVVFAEENRKKP EMRARE
Sbjct:   37 DLPTSLLVRNLRHDCRTEDLRGPFGHFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAADAKHHMDGEILLGRELTVVFAEENRKKPAEMRARE 130
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TrEMBL
Match: B9IID7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_256035 PE=4 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.949e-42
Identity = 81/94 (86.17%), Postives = 88/94 (93.62%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL  DCRP+DL GPF +FGPLKDVYLPRDYYTGEPRGFGFVQY++PADAADAK+HMDG+IL GRELTVVFAEENRKKP EMRAR+
Sbjct:   35 DLPTSLLVRNLRLDCRPEDLRGPFGRFGPLKDVYLPRDYYTGEPRGFGFVQYLEPADAADAKHHMDGEILFGRELTVVFAEENRKKPAEMRARD 128
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TrEMBL
Match: Q7Y171_ORYSJ (Putative splicing factor OS=Oryza sativa subsp. japonica GN=OSJNBa0090L05.13 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.581e-42
Identity = 80/94 (85.11%), Postives = 86/94 (91.49%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL +DCRPDDL  PF +FG +KD+YLPRDYYTGEPRGFGF+QY DP DAADAKYHMDGQILLGRE+TVVFAEENRKKP EMRARE
Sbjct:   34 DLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARE 127
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TrEMBL
Match: Q10KQ7_ORYSJ (RNA recognition motif family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g25770 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.581e-42
Identity = 80/94 (85.11%), Postives = 86/94 (91.49%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL +DCRPDDL  PF +FG +KD+YLPRDYYTGEPRGFGF+QY DP DAADAKYHMDGQILLGRE+TVVFAEENRKKP EMRARE
Sbjct:   34 DLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARE 127
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TrEMBL
Match: C7J0R1_ORYSJ (Os03g0374575 protein OS=Oryza sativa subsp. japonica GN=Os03g0374575 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.581e-42
Identity = 80/94 (85.11%), Postives = 86/94 (91.49%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL +DCRPDDL  PF +FG +KD+YLPRDYYTGEPRGFGF+QY DP DAADAKYHMDGQILLGRE+TVVFAEENRKKP EMRARE
Sbjct:   41 DLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARE 134
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TrEMBL
Match: B8AQ95_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11773 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 8.581e-42
Identity = 80/94 (85.11%), Postives = 86/94 (91.49%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL +DCRPDDL  PF +FG +KD+YLPRDYYTGEPRGFGF+QY DP DAADAKYHMDGQILLGRE+TVVFAEENRKKP EMRARE
Sbjct:   34 DLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARE 127
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TrEMBL
Match: C5X386_SORBI (Putative uncharacterized protein Sb02g040350 OS=Sorghum bicolor GN=Sb02g040350 PE=4 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 5.562e-41
Identity = 78/94 (82.98%), Postives = 87/94 (92.55%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL +DCRP+DL  PF QFG LKD+YLPRDYYTGEPRGFGFVQY DP DAADAKY+MDGQ++LGR++TVVFAEENRKKPQEMRAR+
Sbjct:   34 DLPTSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYYMDGQVVLGRQITVVFAEENRKKPQEMRARD 127
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TAIR peptide
Match: AT1G55310.2 (| Symbols: SR33, ATSCL33, SCL33, At-SCL33 | SC35-like splicing factor 33 | chr1:20630676-20632567 FORWARD LENGTH=220)

HSP 1 Score: 166.777 bits (421), Expect = 1.176e-41
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL  DCR +DL   F QFGP+KD+YLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDG +LLGRELTVVFAEENRKKP EMRARE
Sbjct:   33 DLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARE 126
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TAIR peptide
Match: AT1G55310.1 (| Symbols: SR33, ATSCL33, SCL33, At-SCL33 | SC35-like splicing factor 33 | chr1:20630676-20632695 FORWARD LENGTH=287)

HSP 1 Score: 166.777 bits (421), Expect = 1.176e-41
Identity = 77/94 (81.91%), Postives = 85/94 (90.43%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL  DCR +DL   F QFGP+KD+YLPRDYYTG+PRGFGFVQ++DPADAADAK+HMDG +LLGRELTVVFAEENRKKP EMRARE
Sbjct:   33 DLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARE 126
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TAIR peptide
Match: AT3G13570.1 (| Symbols: SCL30A, At-SCL30A | SC35-like splicing factor 30A | chr3:4429564-4431602 REVERSE LENGTH=262)

HSP 1 Score: 162.155 bits (409), Expect = 2.896e-40
Identity = 73/94 (77.66%), Postives = 84/94 (89.36%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL  DCR +DL  PF QFGP+KD+YLPRDYYTG+PRGFGF+Q++DPADAA+AK+ MDG +LLGRELTVVFAEENRKKP EMR R+
Sbjct:   34 DLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPTEMRTRD 127
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TAIR peptide
Match: AT1G55310.3 (| Symbols: SR33, SCL33, At-SCL33 | SC35-like splicing factor 33 | chr1:20630676-20632695 FORWARD LENGTH=300)

HSP 1 Score: 157.918 bits (398), Expect = 5.461e-39
Identity = 77/106 (72.64%), Postives = 85/106 (80.19%), Query Frame = -2 
Query:  275 DLPTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTG------------EPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARE 556
            DLPTSLLVRNL  DCR +DL   F QFGP+KD+YLPRDYYTG            +PRGFGFVQ++DPADAADAK+HMDG +LLGRELTVVFAEENRKKP EMRARE
Sbjct:   33 DLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARE 138
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TAIR peptide
Match: AT5G18810.1 (| Symbols: SCL28, At-SCL28 | SC35-like splicing factor 28 | chr5:6268925-6271158 REVERSE LENGTH=236)

HSP 1 Score: 122.094 bits (305), Expect = 3.321e-28
Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = -2 
Query:  284 PTSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMR 550
            P+ LL+RNL  D RP+DL   F +FGPLKD+YLPR+YYTGEPRGFGFV+Y    DAA+A   M+ +++ GRE+ +VFAEENRK PQEMR
Sbjct:   46 PSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAEENRKTPQEMR 134
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TAIR peptide
Match: AT3G55460.1 (| Symbols: SCL30, At-SCL30 | SC35-like splicing factor 30 | chr3:20561024-20563502 FORWARD LENGTH=262)

HSP 1 Score: 117.857 bits (294), Expect = 6.263e-27
Identity = 51/89 (57.30%), Postives = 71/89 (79.78%), Query Frame = -2 
Query:  278 SLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRAR 544
            SLLVRN+  DCRP++L  PF +FGP++DVY+PRDYY+G+PRGF FV++VD  DA +A+  M+ +   GRE+TVV A E+RK+P+EMR +
Sbjct:   48 SLLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVVVASESRKRPEEMRVK 136
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TAIR peptide
Match: AT5G64200.2 (| Symbols: ATSC35, SC35, At-SC35 | ortholog of human splicing factor SC35 | chr5:25681849-25683553 REVERSE LENGTH=303)

HSP 1 Score: 67.0106 bits (162), Expect = 1.268e-11
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -2 
Query:  314 SLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAE 544
            SLLV N+      DDL+  F+++G + DV++PRD  TG+ RGF FV+Y    +A  A   +DG+++ GRE+TV FA+
Sbjct:   17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAK 93
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TAIR peptide
Match: AT5G64200.1 (| Symbols: ATSC35, SC35, At-SC35 | ortholog of human splicing factor SC35 | chr5:25681849-25683553 REVERSE LENGTH=303)

HSP 1 Score: 67.0106 bits (162), Expect = 1.268e-11
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = -2 
Query:  314 SLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAE 544
            SLLV N+      DDL+  F+++G + DV++PRD  TG+ RGF FV+Y    +A  A   +DG+++ GRE+TV FA+
Sbjct:   17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVERLDGRVVDGREITVQFAK 93
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TAIR peptide
Match: AT3G10400.1 (| Symbols: | RNA recognition motif and CCHC-type zinc finger domains containing protein | chr3:3232636-3233421 FORWARD LENGTH=261)

HSP 1 Score: 60.4622 bits (145), Expect = 1.187e-9
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = -2 
Query:  278 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRAR 547
            ++L V NL       D+H  FS FG +  V + +D +T + RG  FV YV   DAA A   MD +IL GR+LTV  A +N +  + ++ R
Sbjct:   57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNGRKLTVSIAADNGRASEFIKKR 146
[Close]
BLAST of Cicer_arietinum_v1_Contig198 vs. TAIR peptide
Match: AT3G08000.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2555034-2555829 REVERSE LENGTH=143)

HSP 1 Score: 55.4546 bits (132), Expect = 3.817e-8
Identity = 31/79 (39.24%), Postives = 41/79 (51.90%), Query Frame = -2 
Query:  311 TSLLVRNLHKDCRPDDLHGPFSQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEE 547
            + L +  L        L   FS FG + +V +  D  +G  RGFGFV + +  DA  AK  MDG+ LLGR L + FA E
Sbjct:   41 SKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRISFALE 119
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig198 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
SF13A_MOUSE3.360e-1946.15Splicing factor, arginine/serine-rich 13A OS=Mus m... [more]
SF13A_HUMAN3.360e-1946.15Splicing factor, arginine/serine-rich 13A OS=Homo ... [more]
SF13B_HUMAN1.667e-1843.96Splicing factor, arginine/serine-rich 13B OS=Homo ... [more]
SFRS2_RAT8.015e-1350.62Splicing factor, arginine/serine-rich 2 OS=Rattus ... [more]
SFRS2_PIG8.015e-1350.62Splicing factor, arginine/serine-rich 2 OS=Sus scr... [more]
SFRS2_PANTR8.015e-1350.62Splicing factor, arginine/serine-rich 2 OS=Pan tro... [more]
SFRS2_MOUSE8.015e-1350.62Splicing factor, arginine/serine-rich 2 OS=Mus mus... [more]
SFRS2_HUMAN8.015e-1350.62Splicing factor, arginine/serine-rich 2 OS=Homo sa... [more]
SFRS2_CHICK8.015e-1350.62Splicing factor, arginine/serine-rich 2 OS=Gallus ... [more]
SFRS2_BOVIN8.015e-1350.62Splicing factor, arginine/serine-rich 2 OS=Bos tau... [more]
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BLAST of Cicer_arietinum_v1_Contig198 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TK79_SOYBN4.397e-4692.55Putative uncharacterized protein OS=Glycine max PE... [more]
C6TJA4_SOYBN2.042e-4388.30Putative uncharacterized protein (Fragment) OS=Gly... [more]
C6T8C8_SOYBN5.942e-4387.23Putative uncharacterized protein OS=Glycine max PE... [more]
B9T013_RICCO7.761e-4388.30Serine/arginine rich splicing factor, putative OS=... [more]
B9IID7_POPTR2.949e-4286.17Predicted protein (Fragment) OS=Populus trichocarp... [more]
Q7Y171_ORYSJ8.581e-4285.11Putative splicing factor OS=Oryza sativa subsp. ja... [more]
Q10KQ7_ORYSJ8.581e-4285.11RNA recognition motif family protein, expressed OS... [more]
C7J0R1_ORYSJ8.581e-4285.11Os03g0374575 protein OS=Oryza sativa subsp. japoni... [more]
B8AQ95_ORYSI8.581e-4285.11Putative uncharacterized protein OS=Oryza sativa s... [more]
C5X386_SORBI5.562e-4182.98Putative uncharacterized protein Sb02g040350 OS=So... [more]
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BLAST of Cicer_arietinum_v1_Contig198 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10
Match NameE-valueIdentityDescription
AT1G55310.21.176e-4181.91| Symbols: SR33, ATSCL33, SCL33, At-SCL33 | SC35-l... [more]
AT1G55310.11.176e-4181.91| Symbols: SR33, ATSCL33, SCL33, At-SCL33 | SC35-l... [more]
AT3G13570.12.896e-4077.66| Symbols: SCL30A, At-SCL30A | SC35-like splicing ... [more]
AT1G55310.35.461e-3972.64| Symbols: SR33, SCL33, At-SCL33 | SC35-like splic... [more]
AT5G18810.13.321e-2862.92| Symbols: SCL28, At-SCL28 | SC35-like splicing fa... [more]
AT3G55460.16.263e-2757.30| Symbols: SCL30, At-SCL30 | SC35-like splicing fa... [more]
AT5G64200.21.268e-1144.16| Symbols: ATSC35, SC35, At-SC35 | ortholog of hum... [more]
AT5G64200.11.268e-1144.16| Symbols: ATSC35, SC35, At-SC35 | ortholog of hum... [more]
AT3G10400.11.187e-938.89| Symbols: | RNA recognition motif and CCHC-type ... [more]
AT3G08000.13.817e-839.24| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..30
score
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 17..222
score: 6.3
NoneNo IPR availableSEGsegsegcoord: 9..41
score: NAcoord: 136..153
score: NAcoord: 159..184
score: NAcoord: 186..224
score
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 44..155
score: 2.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 47..116
score: 5.5
IPR000504RNA recognition motif domainSMARTSM00360no descriptioncoord: 46..119
score: 5.1
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 45..123
score: 16
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330no descriptioncoord: 4..133
score: 8.3

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig198 ID=Cicer_arietinum_v1_Contig198; Name=Cicer_arietinum_v1_Contig198; organism=Cicer arietinum; type=contig; length=758bp
CGGGCAGGTACCCTGGACTACGGCTAATGCTCCTGCTGTAACTCCTACCT
CGACTGGGGCTTCTTGATGCATAAGGCGATCTACTATAAGGGGATCTAGA
GTATGATTCCCTCCTATACCTTCCATCTCTCGGTGAGATTGACCTGGAAT
ATCTGGAATATTGCCTTCGTCCTGGAGAAGGTGAATAGTCTGGACTAGGA
GAATAGGTGCGTGCATAGTGTGGTGAGCGAGAACGACGACGAGGAGATCG
TCTATAATCATATGACCTCCCACGTTCTCTTGCTCTCATTTCTTGAGGTT
TCTTTCTGTTTTCTTCAGCAAACACCACAGTTAACTCGCGACCAAGAAGA
ATTTGACCATCCATGTGATATTTTGCATCTGCAGCATCAGCTGGGTCCAC
ATACTGAACAAATCCAAATCCCCTCGGCTCCCCAGTATAATAATCACGAG
GCAGGTAAACATCCTTGAGAGGACCAAACTGGCTAAATGGACCATGCAGA
TCATCTGGCCTGCAATCTTTGTGAAGGTTCCGAACAAGAAGACTTGTTGG
TAAATCCCTACCACGGCCTCCGTAACGTCCCCTAGGACTAGGACTGCGTC
TGCTTCGACCGTAACGCCTTGGAGGCGACGGACTGTAACTGTAGCTTCTT
CCCCTCATCTTGATTTCGTTATACCTGCTTCAGAAATTGCGGAAGGAACC
TCGGTTGCAGTAATTGGACGCAGCGAAGTTTGATTCTCGCCCGTAGTATT
TGTAACCC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf