Cicer_arietinum_v1_Contig2047

Contig Overview


Name	Cicer_arietinum_v1_Contig2047
Unique Name	Cicer_arietinum_v1_Contig2047
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	578

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
HO064162	EST	HO064162:5..407 +	Cicer arietinum unigene v1	n/a
GR396590	EST	GR396590:1..498 +	Cicer arietinum unigene v1	n/a
HO062265	EST	HO062265:6..579 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
HO064162	HO064162	Cicer arietinum	EST
GR396590	GR396590	Cicer arietinum	EST
HO062265	HO062265	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
Match: RCD1_XENTR (Cell differentiation protein RCD1 homolog OS=Xenopus tropicalis GN=rqcd1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.977e-23
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -1

Query:  303 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQG 578
            T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR C PD L+D TF+  L +D TT++WL QL+ N+   +V   +G
Sbjct:  202 TYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRG 293

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
Match: RCD1_XENLA (Cell differentiation protein RCD1 homolog OS=Xenopus laevis GN=rqcd1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.977e-23
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -1

Query:  303 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQG 578
            T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR C PD L+D TF+  L +D TT++WL QL+ N+   +V   +G
Sbjct:  202 TYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRG 293

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
Match: RCD1_RAT (Cell differentiation protein RCD1 homolog OS=Rattus norvegicus GN=Rqcd1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.977e-23
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -1

Query:  303 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQG 578
            T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR C PD L+D TF+  L +D TT++WL QL+ N+   +V   +G
Sbjct:  202 TYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRG 293

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
Match: RCD1_PONAB (Cell differentiation protein RCD1 homolog OS=Pongo abelii GN=RQCD1 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 2.977e-23
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -1

Query:  303 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQG 578
            T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR C PD L+D TF+  L +D TT++WL QL+ N+   +V   +G
Sbjct:  202 TYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRG 293

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
Match: RCD1_MOUSE (Cell differentiation protein RCD1 homolog OS=Mus musculus GN=Rqcd1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.977e-23
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -1

Query:  303 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQG 578
            T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR C PD L+D TF+  L +D TT++WL QL+ N+   +V   +G
Sbjct:  202 TYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRG 293

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
Match: RCD1_MACFA (Cell differentiation protein RCD1 homolog OS=Macaca fascicularis GN=RQCD1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.977e-23
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -1

Query:  303 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQG 578
            T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR C PD L+D TF+  L +D TT++WL QL+ N+   +V   +G
Sbjct:  202 TYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRG 293

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
Match: RCD1_HUMAN (Cell differentiation protein RCD1 homolog OS=Homo sapiens GN=RQCD1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.977e-23
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -1

Query:  303 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQG 578
            T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR C PD L+D TF+  L +D TT++WL QL+ N+   +V   +G
Sbjct:  202 TYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRG 293

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
Match: RCD1_BOVIN (Cell differentiation protein RCD1 homolog OS=Bos taurus GN=RQCD1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.977e-23
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -1

Query:  303 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQG 578
            T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR C PD L+D TF+  L +D TT++WL QL+ N+   +V   +G
Sbjct:  202 TYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRG 293

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
Match: RCD1_DANRE (Cell differentiation protein RCD1 homolog OS=Danio rerio GN=rqcd1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.520e-22
Identity = 49/92 (53.26%), Postives = 66/92 (71.74%), Query Frame = -1

Query:  303 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQG 578
            T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDN RA +ALR C PD L+D TF+  L +D TT++WL QL+ N+   +V   +G
Sbjct:  201 TYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNSRAREALRQCLPDQLKDTTFAQVLKDDSTTKRWLAQLVKNLQEGQVTDPRG 292

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
Match: RCD1_SCHPO (Cell differentiation protein rcd1 OS=Schizosaccharomyces pombe GN=rcd1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.383e-20
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = -1

Query:  333 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNV 578
            T ERF+AV  VL NMV  L +  + RLLKH+IRCYLRLSDNPRA +ALR C P+ LRDATF+  L +D  T+K L QLL N+
Sbjct:  194 TYERFYAVASVLNNMVMQLVDSFAFRLLKHVIRCYLRLSDNPRAREALRHCLPEPLRDATFAQVLKDDHNTKKCLAQLLINL 275

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
Match: B9I150_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_805875 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.575e-48
Identity = 93/102 (91.18%), Postives = 96/102 (94.12%), Query Frame = -1

Query:  273 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQGGGGFDHLMVN 578
            TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRAC ALRSC PDMLRDATFSSCL EDPTTR+WLQQLLHNVG NRVP LQ GGGFDH++VN
Sbjct:  219 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACHALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGGNRVPGLQAGGGFDHMLVN 320

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
Match: B9GJH1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_829875 PE=4 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.784e-48
Identity = 94/103 (91.26%), Postives = 97/103 (94.17%), Query Frame = -1

Query:  273 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNR-VPALQGGGGFDHLMVN 578
            TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSC PDMLRDATFSSCL EDPTTR+WLQQLLHNVG NR VP LQ GGGFDH++VN
Sbjct:  221 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGGNRVVPGLQAGGGFDHMLVN 323

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
Match: D7T815_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_90.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037697001 PE=4 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.196e-45
Identity = 88/102 (86.27%), Postives = 95/102 (93.14%), Query Frame = -1

Query:  273 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQGGGGFDHLMVN 578
            TAERFFAVGRVLGNMVAALAEQ S+RLLKHIIRCYLRLSDNPRACDALR+C PDML+DATFSSCL EDPTTR+WLQQLLHNVG +RV A Q GGGFDH++VN
Sbjct:  184 TAERFFAVGRVLGNMVAALAEQQSTRLLKHIIRCYLRLSDNPRACDALRNCLPDMLKDATFSSCLREDPTTRRWLQQLLHNVGGSRVAAFQAGGGFDHMLVN 285

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
Match: B9STZ0_RICCO (Cell differentiation protein rcd1, putative OS=Ricinus communis GN=RCOM_0752590 PE=4 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.562e-45
Identity = 88/102 (86.27%), Postives = 94/102 (92.16%), Query Frame = -1

Query:  273 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQGGGGFDHLMVN 578
            TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSC PDMLRD TFSSCL EDPTTR+WLQQLLHNVGV+RVP L  G  F+H++V+
Sbjct:  218 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDNTFSSCLREDPTTRRWLQQLLHNVGVSRVPGLPAGAAFEHMLVS 319

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
Match: D7KZW6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479606 PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.185e-39
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = -1

Query:  279 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQGGGGFDHLM 578
            TAERFFAVGRVLGNMV +L EQPS RLLKHIIRCYLRLSDNPRAC AL SC PD LRD TFS+CL EDPT R+WLQQL+HNVGV RVP  Q GGGF+H++
Sbjct:  218 TAERFFAVGRVLGNMVQSLVEQPSPRLLKHIIRCYLRLSDNPRACAALASCLPDSLRDGTFSNCLREDPTARRWLQQLVHNVGVGRVPTHQ-GGGFEHML 316

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
Match: Q9LT41_ARATH (RCD1 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.356e-39
Identity = 78/100 (78.00%), Postives = 86/100 (86.00%), Query Frame = -1

Query:  279 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQGGGGFDHLM 578
            TAERFFAVGRVLGNMV +L EQPS RLLKHIIRCYLRLSDNPRAC AL SC PD LRD +FS+CL EDPT R+WLQQL+HNVGV RVP  Q GGGF+H++
Sbjct:  209 TAERFFAVGRVLGNMVQSLVEQPSPRLLKHIIRCYLRLSDNPRACAALASCLPDSLRDGSFSNCLREDPTARRWLQQLVHNVGVGRVPTHQ-GGGFEHML 307

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
Match: Q8RWV5_ARATH (Putative cell differentiation protein OS=Arabidopsis thaliana GN=At3g20800 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.356e-39
Identity = 78/100 (78.00%), Postives = 86/100 (86.00%), Query Frame = -1

Query:  279 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQGGGGFDHLM 578
            TAERFFAVGRVLGNMV +L EQPS RLLKHIIRCYLRLSDNPRAC AL SC PD LRD +FS+CL EDPT R+WLQQL+HNVGV RVP  Q GGGF+H++
Sbjct:  218 TAERFFAVGRVLGNMVQSLVEQPSPRLLKHIIRCYLRLSDNPRACAALASCLPDSLRDGSFSNCLREDPTARRWLQQLVHNVGVGRVPTHQ-GGGFEHML 316

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
Match: Q8LF62_ARATH (Putative cell differentiation protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.415e-38
Identity = 77/100 (77.00%), Postives = 85/100 (85.00%), Query Frame = -1

Query:  279 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQGGGGFDHLM 578
            TAERFFAVGRVLGNMV +L EQPS RLLKHI RCYLRLSDNPRAC AL SC PD LRD +FS+CL EDPT R+WLQQL+HNVGV RVP  Q GGGF+H++
Sbjct:  218 TAERFFAVGRVLGNMVQSLVEQPSPRLLKHITRCYLRLSDNPRACAALASCLPDSLRDGSFSNCLREDPTARRWLQQLVHNVGVGRVPTHQ-GGGFEHML 316

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
Match: Q9LXU1_ARATH (Phytochrome interacting molecule 1 OS=Arabidopsis thaliana GN=T24H18_150 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.157e-34
Identity = 73/103 (70.87%), Postives = 82/103 (79.61%), Query Frame = -1

Query:  273 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGV-NRVPALQGGGGFDHLMVN 578
            TAERFFA+GRVLGNMV +LAE PS+RLLKHIIRCYLRL+DNPRACDAL SC PD+LRDATFS CL++DP   +WLQQLLHNV V  R P      G  H+ VN
Sbjct:  214 TAERFFALGRVLGNMVTSLAEGPSARLLKHIIRCYLRLTDNPRACDALGSCLPDLLRDATFSGCLYDDPPAMQWLQQLLHNVNVGGRAPQ-----GLAHMFVN 311

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
Match: Q6NPS9_ARATH (At5g12980 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.157e-34
Identity = 73/103 (70.87%), Postives = 82/103 (79.61%), Query Frame = -1

Query:  273 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGV-NRVPALQGGGGFDHLMVN 578
            TAERFFA+GRVLGNMV +LAE PS+RLLKHIIRCYLRL+DNPRACDAL SC PD+LRDATFS CL++DP   +WLQQLLHNV V  R P      G  H+ VN
Sbjct:  129 TAERFFALGRVLGNMVTSLAEGPSARLLKHIIRCYLRLTDNPRACDALGSCLPDLLRDATFSGCLYDDPPAMQWLQQLLHNVNVGGRAPQ-----GLAHMFVN 226

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TAIR peptide
Match: AT3G20800.1 (| Symbols: | Cell differentiation, Rcd1-like protein | chr3:7271412-7273897 REVERSE LENGTH=316)

HSP 1 Score: 164.081 bits (414), Expect = 4.846e-41
Identity = 78/100 (78.00%), Postives = 86/100 (86.00%), Query Frame = -1

Query:  279 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGVNRVPALQGGGGFDHLM 578
            TAERFFAVGRVLGNMV +L EQPS RLLKHIIRCYLRLSDNPRAC AL SC PD LRD +FS+CL EDPT R+WLQQL+HNVGV RVP  Q GGGF+H++
Sbjct:  218 TAERFFAVGRVLGNMVQSLVEQPSPRLLKHIIRCYLRLSDNPRACAALASCLPDSLRDGSFSNCLREDPTARRWLQQLVHNVGVGRVPTHQ-GGGFEHML 316

[Close]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TAIR peptide
Match: AT5G12980.1 (| Symbols: | Cell differentiation, Rcd1-like protein | chr5:4105562-4108139 REVERSE LENGTH=311)

HSP 1 Score: 147.517 bits (371), Expect = 4.694e-36
Identity = 73/103 (70.87%), Postives = 82/103 (79.61%), Query Frame = -1

Query:  273 TAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCFPDMLRDATFSSCLHEDPTTRKWLQQLLHNVGV-NRVPALQGGGGFDHLMVN 578
            TAERFFA+GRVLGNMV +LAE PS+RLLKHIIRCYLRL+DNPRACDAL SC PD+LRDATFS CL++DP   +WLQQLLHNV V  R P      G  H+ VN
Sbjct:  214 TAERFFALGRVLGNMVTSLAEGPSARLLKHIIRCYLRLTDNPRACDALGSCLPDLLRDATFSGCLYDDPPAMQWLQQLLHNVNVGGRAPQ-----GLAHMFVN 311

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig2047 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig2047 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RCD1_XENTR	2.977e-23	54.35	Cell differentiation protein RCD1 homolog OS=Xenop...	[more]
RCD1_XENLA	2.977e-23	54.35	Cell differentiation protein RCD1 homolog OS=Xenop...	[more]
RCD1_RAT	2.977e-23	54.35	Cell differentiation protein RCD1 homolog OS=Rattu...	[more]
RCD1_PONAB	2.977e-23	54.35	Cell differentiation protein RCD1 homolog OS=Pongo...	[more]
RCD1_MOUSE	2.977e-23	54.35	Cell differentiation protein RCD1 homolog OS=Mus m...	[more]
RCD1_MACFA	2.977e-23	54.35	Cell differentiation protein RCD1 homolog OS=Macac...	[more]
RCD1_HUMAN	2.977e-23	54.35	Cell differentiation protein RCD1 homolog OS=Homo ...	[more]
RCD1_BOVIN	2.977e-23	54.35	Cell differentiation protein RCD1 homolog OS=Bos t...	[more]
RCD1_DANRE	2.520e-22	53.26	Cell differentiation protein RCD1 homolog OS=Danio...	[more]
RCD1_SCHPO	1.383e-20	60.98	Cell differentiation protein rcd1 OS=Schizosacchar...	[more]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9I150_POPTR	2.575e-48	91.18	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GJH1_POPTR	9.784e-48	91.26	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7T815_VITVI	1.196e-45	86.27	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9STZ0_RICCO	1.562e-45	86.27	Cell differentiation protein rcd1, putative OS=Ric...	[more]
D7KZW6_ARALY	2.185e-39	79.00	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9LT41_ARATH	6.356e-39	78.00	RCD1 OS=Arabidopsis thaliana PE=4 SV=1	[more]
Q8RWV5_ARATH	6.356e-39	78.00	Putative cell differentiation protein OS=Arabidops...	[more]
Q8LF62_ARATH	2.415e-38	77.00	Putative cell differentiation protein OS=Arabidops...	[more]
Q9LXU1_ARATH	6.157e-34	70.87	Phytochrome interacting molecule 1 OS=Arabidopsis ...	[more]
Q6NPS9_ARATH	6.157e-34	70.87	At5g12980 OS=Arabidopsis thaliana PE=2 SV=1	[more]

BLAST of Cicer_arietinum_v1_Contig2047 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G20800.1	4.846e-41	78.00	\| Symbols: \| Cell differentiation, Rcd1-like prot...	[more]
AT5G12980.1	4.694e-36	70.87	\| Symbols: \| Cell differentiation, Rcd1-like prot...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007216	Cell differentiation, Rcd1-like	PANTHER	PTHR12262	UNCHARACTERIZED	coord: 1..98 score: 4
IPR007216	Cell differentiation, Rcd1-like	PFAM	PF04078	Rcd1	coord: 1..83 score: 1.9

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig2047 ID=Cicer_arietinum_v1_Contig2047; Name=Cicer_arietinum_v1_Contig2047; organism=Cicer arietinum; type=contig; length=578bp
CTTGATGTCTTAAACTTGAATTATTTGATATATAAATGTGCACTACACAC
TCCTTAAAAGAAGTGGAGTGTTCACGCCACGGGGTGAAAAGAACCACCAC
CTAATTGGCTACATAACTGTTACCTGCCAAACACCACCATGTCCTCTAAT
ATATATATAGTTTTATTATTAGTATACCAATAAGTACACCCAAACCCTCT
CTAAACCAGATATAACAGAGAGATGATACCAAGTCCAGCAATGAAACAAA
GAACTATAACAGTTTATACTCAATTCACCATAAGATGATCAAAACCTCCT
CCACCTTGTAGTGCGGGAACCCGATTCACTCCAACGTTGTGAAGCAATTG
TTGAAGCCACTTCCTAGTTGTGGGGTCCTCATGAAGGCAGCTGCTGAAAG
TAGCATCTCTTAACATGTCTGGAAAACAGCTTCTGAGTGCATCACAAGCC
CTTGGATTATCTGAAAGGCGAAGGTAGCAGCGAATGATATGCTTCAACAG
ACGAGATGATGGTTGCTCAGCAAGAGCTGCCACCATGTTTCCCAGAACTC
GACCTACTGCGAAGAAACGCTCAGCTGT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR007216	CNOT9

Search form

Cicer_arietinum_v1_Contig2047