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Contig Overview
Name | Cicer_arietinum_v1_Contig2162 |
Unique Name | Cicer_arietinum_v1_Contig2162 |
Type | contig |
Organism | Cicer arietinum (chickpea) |
Sequence length | 900 |
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | SEG | seg | seg | coord: 20..33 score |
None | No IPR available | SEG | seg | seg | coord: 47..60 score: NAcoord: 72..117 score: NAcoord: 143..156 score: NAcoord: 165..178 score: NAcoord: 184..203 score |
None | No IPR available | SEG | seg | seg | coord: 1..16 score |
None | No IPR available | SEG | seg | seg | coord: 53..73 score |
None | No IPR available | SEG | seg | seg | coord: 15..30 score |
None | No IPR available | SEG | seg | seg | coord: 2..14 score: NAcoord: 40..76 score |
None | No IPR available | SEG | seg | seg | coord: 12..31 score |
None | No IPR available | SEG | seg | seg | coord: 6..22 score: NAcoord: 46..93 score: NAcoord: 113..132 score |
IPR000167 | Dehydrin | PFAM | PF00257 | Dehydrin | coord: 16..186 score: 1.8 |
IPR000167 | Dehydrin | PROSITE | PS00315 | DEHYDRIN_1 | coord: 76..94 score |
IPR000167 | Dehydrin | PROSITE | PS00823 | DEHYDRIN_2 | coord: 173..180 score: NAcoord: 132..139 score |
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig2162 ID=Cicer_arietinum_v1_Contig2162; Name=Cicer_arietinum_v1_Contig2162; organism=Cicer arietinum; type=contig; length=900bp AATTCAAAGACAGAGGTGTTTTGATTTTCTAAGGGGTAAGAAAAAGGATG AAGATCCCAAACATCACCAAGAGGATGTGATCGCCACTGAGTTTGATCAT AAGGTCACTCTGTCTGATCAACTGGCAGAGACCAAGAAAGACGAAGATGA AGTTCAAGTTCAAGTTCCAGTTGAAGGAGAGAAGAAACACAACGTCTTCG ACAAGCTTCACCGATCTGGAAGTTCCTCAAGCTCTTCGAGCGAAGAGGAA GGAGAAGATGGAGAGAAGAAGAAAAAGAAAAAGAAGGAAAAGAAGAAGGT AGTGGAAGAGGAGGGTTCAGTTGAAGTTGAAAAAGTAGAAGTTGTGGATG TAACAGCAGCACAACCAACAGAGGAAAAGAAGGGTTTCCTTGAGAAAATA AAGGACAAGTTACCAGGACACAAGAAAACAGAGGAACCACCTGTTGTTGT TGTATCAGAGACAACAAGTCATGATGAAAGTGAAGATGCAGTGAAGGAGA AGAAAGGTATTTTGGAAAAGATCAAAGAGAAACTTCCTGGTTATCATCCT AAGACTACTACTGAACTTGATGACAAAGATCATCACAAGGATGACACAAC AACCTCTCATTGAGAATACTCAATTGTCTTTCTTATCTTGGATTGTGTTG TTTTATGGATGTGTCTGTTTATTGGGTATTTTGCTTTCTTTCATTAATTA ATTAATATCATCAAGGACTTCTTGTGCTTGTCTTCATTTTCTTGATGATA TATTATTGTGCTTTGCTTGTACTTAATTTGTCTTTGTGGCTACTTGTTTC ATTACACAAAGGGAATGTTGTCTCCTTGTATTCAAAGATGTTGTGGAATC AATATTGTATTTTCTTTCTTTTTTAATTACTCAGATATTGTCAACCGCNN back to top
Annotated Terms
The
following terms have been associated with
this contig:
Vocabulary: Biological Process
Term | Definition |
GO:0006950 | response to stress |
GO:0009415 | response to water |
Vocabulary: INTERPRO
Term | Definition |
IPR000167 | Dehydrin |
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