Cicer_arietinum_v1_Contig2162

Contig Overview
NameCicer_arietinum_v1_Contig2162
Unique NameCicer_arietinum_v1_Contig2162
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length900
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
DY475092ESTDY475092:146..400 +Cicer arietinum unigene v1n/a
HO067856ESTHO067856:69..646 +Cicer arietinum unigene v1n/a
HO067855ESTHO067855:103..695 +Cicer arietinum unigene v1n/a
FE669675ESTFE669675:126..729 -Cicer arietinum unigene v1n/a
GR396584ESTGR396584:268..677 -Cicer arietinum unigene v1n/a
GR915328ESTGR915328:241..696 +Cicer arietinum unigene v1n/a
GR409930ESTGR409930:202..732 +Cicer arietinum unigene v1n/a
GR915649ESTGR915649:374..791 -Cicer arietinum unigene v1n/a
GR917261ESTGR917261:348..794 -Cicer arietinum unigene v1n/a
GR912549ESTGR912549:352..781 +Cicer arietinum unigene v1n/a
HO067857ESTHO067857:245..740 -Cicer arietinum unigene v1n/a
GR399209ESTGR399209:1..807 -Cicer arietinum unigene v1n/a
GR395908ESTGR395908:202..874 -Cicer arietinum unigene v1n/a
GR396563ESTGR396563:331..868 -Cicer arietinum unigene v1n/a
HO066323ESTHO066323:390..877 +Cicer arietinum unigene v1n/a
GR400215ESTGR400215:453..900 +Cicer arietinum unigene v1n/a
GR398563ESTGR398563:773..878 +Cicer arietinum unigene v1n/a
GR398535ESTGR398535:773..878 +Cicer arietinum unigene v1n/a
FE672517ESTFE672517:521..878 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
DY475092DY475092Cicer arietinumEST
HO067856HO067856Cicer arietinumEST
HO067855HO067855Cicer arietinumEST
FE669675FE669675Cicer arietinumEST
GR396584GR396584Cicer arietinumEST
GR915328GR915328Cicer arietinumEST
GR409930GR409930Cicer arietinumEST
GR915649GR915649Cicer arietinumEST
GR917261GR917261Cicer arietinumEST
GR912549GR912549Cicer arietinumEST
HO067857HO067857Cicer arietinumEST
GR399209GR399209Cicer arietinumEST
GR395908GR395908Cicer arietinumEST
GR396563GR396563Cicer arietinumEST
HO066323HO066323Cicer arietinumEST
GR400215GR400215Cicer arietinumEST
GR398563GR398563Cicer arietinumEST
GR398535GR398535Cicer arietinumEST
FE672517FE672517Cicer arietinumEST


InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 20..33
score
NoneNo IPR availableSEGsegsegcoord: 47..60
score: NAcoord: 72..117
score: NAcoord: 143..156
score: NAcoord: 165..178
score: NAcoord: 184..203
score
NoneNo IPR availableSEGsegsegcoord: 1..16
score
NoneNo IPR availableSEGsegsegcoord: 53..73
score
NoneNo IPR availableSEGsegsegcoord: 15..30
score
NoneNo IPR availableSEGsegsegcoord: 2..14
score: NAcoord: 40..76
score
NoneNo IPR availableSEGsegsegcoord: 12..31
score
NoneNo IPR availableSEGsegsegcoord: 6..22
score: NAcoord: 46..93
score: NAcoord: 113..132
score
IPR000167DehydrinPFAMPF00257Dehydrincoord: 16..186
score: 1.8
IPR000167DehydrinPROSITEPS00315DEHYDRIN_1coord: 76..94
score
IPR000167DehydrinPROSITEPS00823DEHYDRIN_2coord: 173..180
score: NAcoord: 132..139
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2162 ID=Cicer_arietinum_v1_Contig2162; Name=Cicer_arietinum_v1_Contig2162; organism=Cicer arietinum; type=contig; length=900bp
AATTCAAAGACAGAGGTGTTTTGATTTTCTAAGGGGTAAGAAAAAGGATG
AAGATCCCAAACATCACCAAGAGGATGTGATCGCCACTGAGTTTGATCAT
AAGGTCACTCTGTCTGATCAACTGGCAGAGACCAAGAAAGACGAAGATGA
AGTTCAAGTTCAAGTTCCAGTTGAAGGAGAGAAGAAACACAACGTCTTCG
ACAAGCTTCACCGATCTGGAAGTTCCTCAAGCTCTTCGAGCGAAGAGGAA
GGAGAAGATGGAGAGAAGAAGAAAAAGAAAAAGAAGGAAAAGAAGAAGGT
AGTGGAAGAGGAGGGTTCAGTTGAAGTTGAAAAAGTAGAAGTTGTGGATG
TAACAGCAGCACAACCAACAGAGGAAAAGAAGGGTTTCCTTGAGAAAATA
AAGGACAAGTTACCAGGACACAAGAAAACAGAGGAACCACCTGTTGTTGT
TGTATCAGAGACAACAAGTCATGATGAAAGTGAAGATGCAGTGAAGGAGA
AGAAAGGTATTTTGGAAAAGATCAAAGAGAAACTTCCTGGTTATCATCCT
AAGACTACTACTGAACTTGATGACAAAGATCATCACAAGGATGACACAAC
AACCTCTCATTGAGAATACTCAATTGTCTTTCTTATCTTGGATTGTGTTG
TTTTATGGATGTGTCTGTTTATTGGGTATTTTGCTTTCTTTCATTAATTA
ATTAATATCATCAAGGACTTCTTGTGCTTGTCTTCATTTTCTTGATGATA
TATTATTGTGCTTTGCTTGTACTTAATTTGTCTTTGTGGCTACTTGTTTC
ATTACACAAAGGGAATGTTGTCTCCTTGTATTCAAAGATGTTGTGGAATC
AATATTGTATTTTCTTTCTTTTTTAATTACTCAGATATTGTCAACCGCNN
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0009415response to water
Vocabulary: INTERPRO
TermDefinition
IPR000167Dehydrin