Cicer_arietinum_v1_Contig2174

Contig Overview


Name	Cicer_arietinum_v1_Contig2174
Unique Name	Cicer_arietinum_v1_Contig2174
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	886

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GR404327	EST	GR404327:6..347 +
GR397787	EST	GR397787:2..339 +
GR399117	EST	GR399117:1..719 +
GR408867	EST	GR408867:17..746 +
GR391878	EST	GR391878:390..713 -
GR915347	EST	GR915347:219..670 +
GR407964	EST	GR407964:197..779 +
GR408558	EST	GR408558:276..779 -
GR404740	EST	GR404740:277..775 -
GR397265	EST	GR397265:407..886 -

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR404327	GR404327	Cicer arietinum	EST
GR397787	GR397787	Cicer arietinum	EST
GR399117	GR399117	Cicer arietinum	EST
GR408867	GR408867	Cicer arietinum	EST
GR391878	GR391878	Cicer arietinum	EST
GR915347	GR915347	Cicer arietinum	EST
GR407964	GR407964	Cicer arietinum	EST
GR408558	GR408558	Cicer arietinum	EST
GR404740	GR404740	Cicer arietinum	EST
GR397265	GR397265	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
Match: RS193_ARATH (40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.371e-65
Identity = 116/136 (85.29%), Postives = 128/136 (94.12%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVA 505
            VKDVSPHEFV AY+AHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG +ARHILQQLQ MNI+++DTKGGRKITSSG+RDLDQVAGRI  A
Sbjct:    7 VKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIAAA 142

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
Match: RS191_ARATH (40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.371e-65
Identity = 115/137 (83.94%), Postives = 129/137 (94.16%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVAP 508
            VKDVSPH+FV AY++HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG IARHILQQL+ MNI+E+DTKGGR+ITSSG+RDLDQVAGRI V P
Sbjct:    7 VKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGRIAVEP 143

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
Match: RS192_ARATH (40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.410e-64
Identity = 114/133 (85.71%), Postives = 127/133 (95.49%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRI 496
            VKDVSPH+FV AY++HLKRSGK+ELP WTDIVKT R KELAPYDPDWYY+RAASMARKIYLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG IARHILQQL+ M+I+E+DTKGGR+ITSSG+RDLDQVAGRI
Sbjct:    7 VKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRDLDQVAGRI 139

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
Match: RS19_ORYSJ (40S ribosomal protein S19 OS=Oryza sativa subsp. japonica GN=RPS19A PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.049e-61
Identity = 112/135 (82.96%), Postives = 122/135 (90.37%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVV 502
            VKDV+PHEFV AYSAHLKRSGKMELPEW DIVKTARFKEL PYDPDWYY RAAS+ARKIYLR G+GVG FQ+IYGG QRNGSRPPHFCKSSG+I+R+ILQQLQ M II++D KGGR ITS GRRDLDQVAGR+ V
Sbjct:    9 VKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQVAGRVDV 143

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
Match: RS19_MYAAR (40S ribosomal protein S19 OS=Mya arenaria GN=RPS19 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.239e-46
Identity = 78/133 (58.65%), Postives = 108/133 (81.20%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRI 496
            VKDVS HEF  A++A LK+SGKM++PEWTD VKT  FKEL+PY+PDWY++RAAS+ R +Y+R   G+G+F++IYGG +R G+ P HFCK++GSI+R +LQ L+ + I+E D  GGR++TS GRRDLD++A +I
Sbjct:    5 VKDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTSQGRRDLDRIAAQI 137

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
Match: RS19_RAT (40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 2.782e-42
Identity = 78/136 (57.35%), Postives = 103/136 (75.74%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVA 505
            VKDV+  EFV A +A LK+SGK+++PEW D VK A+ KELAPYD +W+Y RAAS AR +YLRGG GVG+  +IYGG QRNG RP HF + S S+AR +LQ L+ + ++E D  GGRK+T  G+RDLD++AG++  A
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAA 141

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
Match: RS19_MOUSE (40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 2.782e-42
Identity = 78/136 (57.35%), Postives = 103/136 (75.74%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVA 505
            VKDV+  EFV A +A LK+SGK+++PEW D VK A+ KELAPYD +W+Y RAAS AR +YLRGG GVG+  +IYGG QRNG RP HF + S S+AR +LQ L+ + ++E D  GGRK+T  G+RDLD++AG++  A
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAA 141

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
Match: RS19_BRABE (40S ribosomal protein S19 OS=Branchiostoma belcheri GN=RPS19 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.057e-41
Identity = 76/136 (55.88%), Postives = 106/136 (77.94%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVA 505
            VKDV+  EFV A++A LK+SGK++LPEW D+VKTA  KELAPYDPDW+Y+RAAS AR +Y+RGG+GVGA  +IYGG +R G++P  F   S  ++R +LQ L+ + ++E D  GGR++TS G+RDLD++AG++  A
Sbjct:    7 VKDVNQQEFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTSQGQRDLDRIAGQVATA 142

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
Match: RS19_PONAB (40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 1.381e-41
Identity = 77/136 (56.62%), Postives = 102/136 (75.00%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVA 505
            VKDV+  EFV A +A LK+SGK+++PEW D VK A+ KELAPYD +W+Y RAAS AR +YLRGG GVG+  +IYGG QRNG  P HF + S S+AR +LQ L+ + ++E D  GGRK+T  G+RDLD++AG++  A
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAA 141

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
Match: RS19_HUMAN (40S ribosomal protein S19 OS=Homo sapiens GN=RPS19 PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 1.381e-41
Identity = 77/136 (56.62%), Postives = 102/136 (75.00%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVA 505
            VKDV+  EFV A +A LK+SGK+++PEW D VK A+ KELAPYD +W+Y RAAS AR +YLRGG GVG+  +IYGG QRNG  P HF + S S+AR +LQ L+ + ++E D  GGRK+T  G+RDLD++AG++  A
Sbjct:    6 VKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAA 141

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
Match: C6SVR8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 6.876e-71
Identity = 130/137 (94.89%), Postives = 136/137 (99.27%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVAP 508
            VKDVSPHEFV AYS+HLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGS+RNGSRPPHFCKSSG++ARHILQQLQNM+IIE+DTKGGRKITSSGRRDLDQVAGRIVVAP
Sbjct:    7 VKDVSPHEFVKAYSSHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAVARHILQQLQNMSIIELDTKGGRKITSSGRRDLDQVAGRIVVAP 143

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
Match: C6SWT1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 8.980e-71
Identity = 131/137 (95.62%), Postives = 135/137 (98.54%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVAP 508
            VKDVSPH FV AYS+HLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGS+RNGSRPPHFCKSSG+IARHILQQLQNMNIIE+DTKGGRKITSSGRRDLDQVAGRIVVAP
Sbjct:    7 VKDVSPHGFVKAYSSHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMNIIELDTKGGRKITSSGRRDLDQVAGRIVVAP 143

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
Match: B7FHE5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 2.212e-69
Identity = 126/137 (91.97%), Postives = 135/137 (98.54%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVAP 508
            VKDVSP EFV AYSAHLKRSGK+ELPEWTD+VKTA+FKELAPYDPDWYYVRAASMARKIY+RGGLGVG+FQRIYGGSQRNGSRPPHFCKSSG+IARHILQQL+NMN+IEMDTKGGRKITSSGRRDLDQVAGRI+VAP
Sbjct:    7 VKDVSPREFVNAYSAHLKRSGKLELPEWTDLVKTAKFKELAPYDPDWYYVRAASMARKIYVRGGLGVGSFQRIYGGSQRNGSRPPHFCKSSGAIARHILQQLENMNLIEMDTKGGRKITSSGRRDLDQVAGRILVAP 143

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
Match: C6T4Z6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 8.405e-69
Identity = 125/136 (91.91%), Postives = 135/136 (99.26%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVA 505
            VKDVSPH+FV AY++HLKRSGKMELPEWTDIVKTA+FKELAPYDPDWYY+RAASMARKIYLRGGLGVGAFQRIYGGS+RNGSRPPHFCKSSG+IARHILQQLQNM+I+E+DTKGGRKITSSGRRDLDQVAGRIVVA
Sbjct:    7 VKDVSPHDFVKAYASHLKRSGKMELPEWTDIVKTAKFKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMSIVEIDTKGGRKITSSGRRDLDQVAGRIVVA 142

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
Match: B9H0J0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_556400 PE=4 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 1.434e-68
Identity = 125/137 (91.24%), Postives = 134/137 (97.81%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVAP 508
            VKDVSPHEFV AYSAHLKRSGK+ELP WTDIVKTA+FKELAPYDPDWYY+RAASMARKIYLRGGLGVGAF+RIYGGSQRNGSRPPHFCKSSGS+ARHILQQLQNMNII++D KGGR+ITSSG+RDLDQVAGRIVVAP
Sbjct:    7 VKDVSPHEFVKAYSAHLKRSGKVELPPWTDIVKTAKFKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSQRNGSRPPHFCKSSGSVARHILQQLQNMNIIDVDPKGGRRITSSGQRDLDQVAGRIVVAP 143

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
Match: C6THE9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 2.445e-68
Identity = 125/136 (91.91%), Postives = 134/136 (98.53%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVA 505
            VKDVSPH+FV AY++HLKR GKMELPEWTDIVKTA+FKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGS+RNGSRPPHFCKSSG+IARHILQQLQNM+I+E+DTKGGRKITSSGRRDLDQVAGRIVVA
Sbjct:    7 VKDVSPHDFVKAYASHLKRPGKMELPEWTDIVKTAKFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNMSIVEIDTKGGRKITSSGRRDLDQVAGRIVVA 142

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
Match: C6SVH1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 3.194e-68
Identity = 125/136 (91.91%), Postives = 135/136 (99.26%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVA 505
            VKDVSPH+FV AY++HLKRSGKMELPEWTDIVKTA+FKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGS+RNGSRPP+FCKSSG+IARHILQQLQNM+I+E+DTKGGRKITSSGRRDLDQVAGRIVVA
Sbjct:    7 VKDVSPHDFVKAYASHLKRSGKMELPEWTDIVKTAKFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSKRNGSRPPYFCKSSGAIARHILQQLQNMSIVEIDTKGGRKITSSGRRDLDQVAGRIVVA 142

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
Match: A9PGL4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_814470 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 6.023e-67
Identity = 123/137 (89.78%), Postives = 133/137 (97.08%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVAP 508
            VKDVSPHEFV AYSAHLKRSGK+ELP WTDIVKT +FKELAPYDPDWYYVRAASMARKIY+RGGLGVGAF+RIYGGS+RNGSRPPHFCKSSGSIARHILQQLQN+NII++D KGGR+ITSSG+RDLDQVAGRIVVAP
Sbjct:    7 VKDVSPHEFVKAYSAHLKRSGKIELPLWTDIVKTGKFKELAPYDPDWYYVRAASMARKIYIRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLQNVNIIDIDPKGGRRITSSGQRDLDQVAGRIVVAP 143

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
Match: A5C4J2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028810 PE=4 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.989e-66
Identity = 121/136 (88.97%), Postives = 131/136 (96.32%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVA 505
            VKDVSPHEFV AY+AHLKRSGK+ELP WTDIVKTA FKELAPYDPDWYY+RAASMARKIYLRGG+GVGAF+RIYGGS+RNGSRPPHFCKSSGSIARHILQQLQ MNIIE+D+KGGR+ITSSG+RDLDQVAGRI VA
Sbjct:    7 VKDVSPHEFVNAYAAHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYIRAASMARKIYLRGGIGVGAFRRIYGGSKRNGSRPPHFCKSSGSIARHILQQLQTMNIIELDSKGGRRITSSGQRDLDQVAGRIAVA 142

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
Match: B9SJC6_RICCO (40S ribosomal protein S19-3, putative OS=Ricinus communis GN=RCOM_0524930 PE=4 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.640e-64
Identity = 120/137 (87.59%), Postives = 130/137 (94.89%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVAP 508
            VKDVSPHEFV AY+AHLKRSGK+ELP WTDIVKT   KELAPYDPDWY+VRAASMARKIYLRGGLGVGAF+RIYGGS+RNGSRPPHF KSSG+IARHILQQLQNMNI+++D KGGRKITSSG+RDLDQVAGRIVVAP
Sbjct:    7 VKDVSPHEFVKAYAAHLKRSGKIELPPWTDIVKTGTLKELAPYDPDWYFVRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFGKSSGAIARHILQQLQNMNIVDIDPKGGRKITSSGQRDLDQVAGRIVVAP 143

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TAIR peptide
Match: AT5G61170.1 (| Symbols: | Ribosomal protein S19e family protein | chr5:24611158-24612202 FORWARD LENGTH=143)

HSP 1 Score: 249.98 bits (637), Expect = 1.329e-66
Identity = 116/136 (85.29%), Postives = 128/136 (94.12%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVA 505
            VKDVSPHEFV AY+AHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG +ARHILQQLQ MNI+++DTKGGRKITSSG+RDLDQVAGRI  A
Sbjct:    7 VKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIAAA 142

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TAIR peptide
Match: AT3G02080.1 (| Symbols: | Ribosomal protein S19e family protein | chr3:364138-365161 REVERSE LENGTH=143)

HSP 1 Score: 249.98 bits (637), Expect = 1.329e-66
Identity = 115/137 (83.94%), Postives = 129/137 (94.16%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRIVVAP 508
            VKDVSPH+FV AY++HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG IARHILQQL+ MNI+E+DTKGGR+ITSSG+RDLDQVAGRI V P
Sbjct:    7 VKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGRIAVEP 143

[Close]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TAIR peptide
Match: AT5G15520.1 (| Symbols: | Ribosomal protein S19e family protein | chr5:5037242-5038136 REVERSE LENGTH=143)

HSP 1 Score: 244.973 bits (624), Expect = 4.274e-65
Identity = 114/133 (85.71%), Postives = 127/133 (95.49%), Query Frame = 2

Query:   98 VKDVSPHEFVTAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQLQNMNIIEMDTKGGRKITSSGRRDLDQVAGRI 496
            VKDVSPH+FV AY++HLKRSGK+ELP WTDIVKT R KELAPYDPDWYY+RAASMARKIYLRGGLGVGAF+RIYGGS+RNGSRPPHFCKSSG IARHILQQL+ M+I+E+DTKGGR+ITSSG+RDLDQVAGRI
Sbjct:    7 VKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRDLDQVAGRI 139

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig2174 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig2174 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS193_ARATH	1.371e-65	85.29	40S ribosomal protein S19-3 OS=Arabidopsis thalian...	[more]
RS191_ARATH	1.371e-65	83.94	40S ribosomal protein S19-1 OS=Arabidopsis thalian...	[more]
RS192_ARATH	4.410e-64	85.71	40S ribosomal protein S19-2 OS=Arabidopsis thalian...	[more]
RS19_ORYSJ	2.049e-61	82.96	40S ribosomal protein S19 OS=Oryza sativa subsp. j...	[more]
RS19_MYAAR	9.239e-46	58.65	40S ribosomal protein S19 OS=Mya arenaria GN=RPS19...	[more]
RS19_RAT	2.782e-42	57.35	40S ribosomal protein S19 OS=Rattus norvegicus GN=...	[more]
RS19_MOUSE	2.782e-42	57.35	40S ribosomal protein S19 OS=Mus musculus GN=Rps19...	[more]
RS19_BRABE	1.057e-41	55.88	40S ribosomal protein S19 OS=Branchiostoma belcher...	[more]
RS19_PONAB	1.381e-41	56.62	40S ribosomal protein S19 OS=Pongo abelii GN=RPS19...	[more]
RS19_HUMAN	1.381e-41	56.62	40S ribosomal protein S19 OS=Homo sapiens GN=RPS19...	[more]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6SVR8_SOYBN	6.876e-71	94.89	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SWT1_SOYBN	8.980e-71	95.62	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FHE5_MEDTR	2.212e-69	91.97	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6T4Z6_SOYBN	8.405e-69	91.91	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9H0J0_POPTR	1.434e-68	91.24	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6THE9_SOYBN	2.445e-68	91.91	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SVH1_SOYBN	3.194e-68	91.91	Putative uncharacterized protein OS=Glycine max PE...	[more]
A9PGL4_POPTR	6.023e-67	89.78	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5C4J2_VITVI	2.989e-66	88.97	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9SJC6_RICCO	1.640e-64	87.59	40S ribosomal protein S19-3, putative OS=Ricinus c...	[more]

BLAST of Cicer_arietinum_v1_Contig2174 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G61170.1	1.329e-66	85.29	\| Symbols: \| Ribosomal protein S19e family protei...	[more]
AT3G02080.1	1.329e-66	83.94	\| Symbols: \| Ribosomal protein S19e family protei...	[more]
AT5G15520.1	4.274e-65	85.71	\| Symbols: \| Ribosomal protein S19e family protei...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001266	Ribosomal protein S19e	PANTHER	PTHR11710	40S RIBOSOMAL PROTEIN S19	coord: 13..154 score: 1.4
IPR001266	Ribosomal protein S19e	PFAM	PF01090	Ribosomal_S19e	coord: 18..152 score: 1.8
IPR018277	Ribosomal protein S19e, conserved site	PROSITE	PS00628	RIBOSOMAL_S19E	coord: 102..121 score
None	No IPR available	SEG	seg	seg	coord: 1..18 score
None	No IPR available	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 61..149 score: 1.1
None	No IPR available	SEG	seg	seg	coord: 5..17 score
None	No IPR available	SEG	seg	seg	coord: 56..70 score
None	No IPR available	SEG	seg	seg	coord: 28..42 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig2174 ID=Cicer_arietinum_v1_Contig2174; Name=Cicer_arietinum_v1_Contig2174; organism=Cicer arietinum; type=contig; length=886bp
GCGGGGAATTCAGTTCTGCGTGTCTCTGAGCGAGTTTGTGTGAGCGAGAG
AGACAGAGAGAGAGAGAGAGGCCGCAACCATGGCAACTGCAAGGACTGTC
AAGGATGTTTCCCCACATGAGTTTGTCACAGCTTACTCTGCTCATCTCAA
GCGATCTGGCAAGATGGAGCTTCCTGAATGGACAGATATTGTGAAGACTG
CAAGGTTTAAGGAGTTGGCTCCCTATGATCCCGACTGGTACTATGTTAGA
GCTGCTTCAATGGCAAGAAAGATCTACTTGAGGGGAGGACTTGGTGTTGG
TGCTTTCCAGAGGATTTATGGTGGGAGCCAGAGGAACGGTAGTCGGCCAC
CTCATTTCTGCAAGAGCAGTGGTTCCATTGCTCGTCATATTCTTCAACAG
TTGCAGAACATGAACATCATTGAAATGGATACCAAGGGTGGCAGGAAAAT
TACTTCCAGCGGCCGAAGGGATCTTGACCAAGTTGCCGGACGTATTGTGG
TTGCACCTTGATTTGTAGAATCACTTCCAGCTGTCACAAACTTATTTATT
TTGTCTGTGTTGGAGAGATGTGAGGATAACAGATTATGTGCAATTTTGAT
TTTAGTATCAAGTGTTTTTTATGTATTGGACGTATTCAATGCTATGTTGC
TTTTTAGTCTTTTAGATGGTATTGTCACATTTAATTTTATTTTACTGAGT
TTTTTGGATTTTCACCCTGAACATTCTTGTTCCTCAAAGTCTTGTTTACT
TACGAAATGAAACTATTAAGTTTTAAATTACATAAACGATTTTTATGGGT
TTGCTGTTAGATTAATATTTAGTTATTATATGTATAATATCAACATTGTG
AATAAGTAATTAAACATTTTGAATGTTTTTAAGGTG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001266	Ribosomal_eS19
IPR018277	Ribosomal_S19e_CS

Search form

Cicer_arietinum_v1_Contig2174