Cicer_arietinum_v1_Contig223

Contig Overview
NameCicer_arietinum_v1_Contig223
Unique NameCicer_arietinum_v1_Contig223
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length767
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR406080ESTGR406080:113..628 +
GR398485ESTGR398485:77..616 +
HO064817ESTHO064817:1..685 -
GR393416ESTGR393416:641..767 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR406080GR406080Cicer arietinumEST
GR398485GR398485Cicer arietinumEST
HO064817HO064817Cicer arietinumEST
GR393416GR393416Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TrEMBL
Match: B7FH72_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.835e-39
Identity = 78/86 (90.70%), Postives = 82/86 (95.35%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFTDPSRN 425
            RW+RPEVYPLFAAVG AVGIC F LVRNICINPEVRVNKQ+RAAGVLENF+EGEKYTEHLLRKFSRNRSPEIMP +NSFFTDPSRN
Sbjct:    5 RWIRPEVYPLFAAVGAAVGICAFSLVRNICINPEVRVNKQSRAAGVLENFAEGEKYTEHLLRKFSRNRSPEIMPGLNSFFTDPSRN 90
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TrEMBL
Match: D7SHY6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007833001 PE=4 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 7.214e-36
Identity = 69/86 (80.23%), Postives = 82/86 (95.35%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFTDPSRN 425
            RW+RPEVYPLFAA+GVAVGICGFQLVRNICINP+VRV+K+ RAAGVLENF+EG+KY+EH LRK+ RN+SPEIMP+INSFF+DP +N
Sbjct:    3 RWLRPEVYPLFAAMGVAVGICGFQLVRNICINPDVRVSKENRAAGVLENFTEGQKYSEHFLRKYVRNKSPEIMPSINSFFSDPEKN 88
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TrEMBL
Match: Q1H8M8_BETVU (B12D-like protein OS=Beta vulgaris GN=b12D PE=4 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.422e-36
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFTDPSRN 425
            RWVRPEVYPLFAAVGVAVGICG QLVRNICINPEVRV+K+ RAAGVLENFSEGEKY EH LRK+ RN++PEIMP+INSFF D +RN
Sbjct:    6 RWVRPEVYPLFAAVGVAVGICGVQLVRNICINPEVRVSKENRAAGVLENFSEGEKYAEHFLRKYVRNKTPEIMPSINSFFADSTRN 91
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TrEMBL
Match: A9PCV0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728792 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.607e-35
Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFTDPSRN 425
            RW+RPEVYPLFAAVGVAVGICGFQL RNICINPEVRV KQ RAAGVL+NFSEGEKY+EH LRK  RNRSP+IMP+IN+FFTDP  N
Sbjct:    5 RWLRPEVYPLFAAVGVAVGICGFQLARNICINPEVRVTKQNRAAGVLDNFSEGEKYSEHGLRKLVRNRSPQIMPSINNFFTDPKLN 90
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TrEMBL
Match: C6T215_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.741e-35
Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFTDPSRN 425
            RW+RPEVYPLFAAVG AVGICGFQLVR+ICINPEVRVNK+ R AGVLENF+EGEKY EH LRK+ RNR+PEIMP+INSFF D SRN
Sbjct:    4 RWLRPEVYPLFAAVGAAVGICGFQLVRSICINPEVRVNKEGRKAGVLENFAEGEKYAEHFLRKYVRNRTPEIMPSINSFFADTSRN 89
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TrEMBL
Match: B9R8Z4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1512780 PE=4 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.042e-34
Identity = 69/84 (82.14%), Postives = 78/84 (92.86%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFTDPS 419
            RW+RPEVYPLFAA+GVAVGIC FQLVRNICINPEVRVNKQ RAAGVLENF EGEKY+E+ LRKF RN++PEIMP+IN FFT+P+
Sbjct:    5 RWIRPEVYPLFAAMGVAVGICSFQLVRNICINPEVRVNKQNRAAGVLENFKEGEKYSENFLRKFVRNKTPEIMPSINRFFTEPN 88
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TrEMBL
Match: D2XQY6_WOLAR (B12D-like protein OS=Wolffia arrhiza PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.504e-33
Identity = 67/83 (80.72%), Postives = 76/83 (91.57%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFTDP 416
            RWVRPEVYPLFAAVGVAVGICGFQLVRN+CINPEVRV+K+ RA+GVLENF+EGE+Y EH LRKF RN+ PEIMP+IN FF +P
Sbjct:    8 RWVRPEVYPLFAAVGVAVGICGFQLVRNVCINPEVRVSKEGRASGVLENFAEGERYAEHSLRKFLRNKRPEIMPSINGFFANP 90
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TrEMBL
Match: Q9XHD5_IPOBA (B12D protein OS=Ipomoea batatas PE=4 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 5.716e-33
Identity = 65/86 (75.58%), Postives = 76/86 (88.37%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFTDPSRN 425
            RW+RPEVYPLFAA+ VAVGICGFQL+RN+  NPEVRVNK+ RAAGVLEN+ EG+KY EH LRKF RN+SPEIMP++N FF+DP RN
Sbjct:    5 RWIRPEVYPLFAAMSVAVGICGFQLIRNLTTNPEVRVNKEGRAAGVLENYEEGKKYAEHSLRKFVRNKSPEIMPSLNRFFSDPQRN 90
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TrEMBL
Match: D7TAM5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_10.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010327001 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.466e-33
Identity = 66/84 (78.57%), Postives = 73/84 (86.90%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFTDPS 419
            RW+RPEVYPLFAAVGVAVGICG QLVRNIC NPEVRV KQ R AGVLENF EGE+Y EH LRKF RN+ P+IMP+IN FF+DP+
Sbjct:    8 RWLRPEVYPLFAAVGVAVGICGMQLVRNICTNPEVRVTKQNRTAGVLENFEEGERYAEHRLRKFVRNKEPQIMPSINKFFSDPN 91
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TrEMBL
Match: B9RMN3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1082060 PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 8.254e-32
Identity = 63/83 (75.90%), Postives = 75/83 (90.36%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFTDP 416
            RW+RPEV+PLFA+VGVAVGICG QLVRNIC NPEVRV K+ RAAGVL+NF+EGE+Y EH LRKF RNRSP+IMP++N FF++P
Sbjct:    5 RWIRPEVFPLFASVGVAVGICGMQLVRNICTNPEVRVTKENRAAGVLDNFAEGERYKEHGLRKFVRNRSPQIMPSLNGFFSEP 87
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TAIR peptide
Match: AT3G48140.1 (| Symbols: | B12D protein | chr3:17778471-17779299 FORWARD LENGTH=88)

HSP 1 Score: 130.183 bits (326), Expect = 1.243e-30
Identity = 59/84 (70.24%), Postives = 69/84 (82.14%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFTDPS 419
            RW+RPEVYPLFAA GVAVGIC F L+RNI  NPEVR  K+ RAAG+L+N +EGEKY E+ LRKF RN+ PEIMP +N FFTDP+
Sbjct:    4 RWLRPEVYPLFAATGVAVGICAFSLIRNITGNPEVRCTKENRAAGILDNHAEGEKYKENFLRKFVRNKKPEIMPGLNKFFTDPT 87
[Close]
BLAST of Cicer_arietinum_v1_Contig223 vs. TAIR peptide
Match: AT3G29970.1 (| Symbols: | B12D protein | chr3:11745299-11746481 FORWARD LENGTH=87)

HSP 1 Score: 100.523 bits (249), Expect = 1.055e-21
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 3 
Query:  168 RWVRPEVYPLFAAVGVAVGICGFQLVRNICINPEVRVNKQTRAAGVLENFSEGEKYTEHLLRKFSRNRSPEIMPTINSFFT 410
            RWVRPEVYPL  A+G    +  FQL RN  +NP+ R+NK+ R  G+LEN  EGEKY +H  RK+ R R P++MP++N FF+
Sbjct:    3 RWVRPEVYPLLGAMGFVTSMVVFQLTRNAFLNPDCRINKEHRKMGILENKDEGEKYAQHNFRKYLRTRQPQVMPSLNRFFS 83
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig223 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FH72_MEDTR1.835e-3990.70Putative uncharacterized protein OS=Medicago trunc... [more]
D7SHY6_VITVI7.214e-3680.23Whole genome shotgun sequence of line PN40024, sca... [more]
Q1H8M8_BETVU9.422e-3683.72B12D-like protein OS=Beta vulgaris GN=b12D PE=4 SV... [more]
A9PCV0_POPTR1.607e-3583.72Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6T215_SOYBN2.741e-3582.56Putative uncharacterized protein OS=Glycine max PE... [more]
B9R8Z4_RICCO1.042e-3482.14Putative uncharacterized protein OS=Ricinus commun... [more]
D2XQY6_WOLAR1.504e-3380.72B12D-like protein OS=Wolffia arrhiza PE=4 SV=1[more]
Q9XHD5_IPOBA5.716e-3375.58B12D protein OS=Ipomoea batatas PE=4 SV=1[more]
D7TAM5_VITVI7.466e-3378.57Whole genome shotgun sequence of line PN40024, sca... [more]
B9RMN3_RICCO8.254e-3275.90Putative uncharacterized protein OS=Ricinus commun... [more]
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BLAST of Cicer_arietinum_v1_Contig223 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G48140.11.243e-3070.24| Symbols: | B12D protein | chr3:17778471-1777929... [more]
AT3G29970.11.055e-2153.09| Symbols: | B12D protein | chr3:11745299-1174648... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 22..38
score: NAcoord: 54..63
score
IPR010530B12DPFAMPF06522B12Dcoord: 4..88
score: 9.6

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig223 ID=Cicer_arietinum_v1_Contig223; Name=Cicer_arietinum_v1_Contig223; organism=Cicer arietinum; type=contig; length=767bp
CAACGCAGAGTACGCGGGGAACCAATAGGATAGCAGCGCCTATGTGGATT
TAAGAATCTCTTGCCAACTTCTCCATTCTCTTTCTCTCACTTCATATTCC
CGTTGCAACCCCTTTTTCCTTTTCAATATCTTCTTCTGCTATCCCTAATC
CATAATCCATGGCAAGTCGCTGGGTCAGACCCGAGGTGTACCCTCTCTTT
GCTGCGGTTGGAGTTGCTGTTGGGATCTGTGGCTTTCAACTTGTTCGCAA
CATCTGCATCAACCCTGAAGTTAGGGTGAACAAGCAGACCCGGGCTGCAG
GAGTATTGGAGAACTTCTCCGAGGGAGAGAAGTATACAGAACATTTATTG
AGGAAGTTTTCACGCAACAGATCCCCAGAGATTATGCCCACCATCAACAG
CTTCTTCACTGACCCAAGTCGCAATTAAGTTTCTTTGGATTGATTTCAGA
TGTGATATATACTGTGTTAAAGGCACTGTTTGATTGTTCGTGCATTTGAA
AAACAAAACGTGGTTGATCTCTCTGCCTGAGCAGCATGTATGCTGTGGTT
GAGAATAACAATACCCTGTTTGTTGCGTTAATTGTTGTTACTGTTTTATT
AAGTTGTGATGCTGTCTAGCTTGCTGCAGATGCTTATTGAAACTGGTGTT
AGAAATTAAATGCTATTGCTAATCTCAGTTCAAGCTTGTTACCAAGTTAT
TACAATTTAAATCCCGTAAGTATTCTTCAACAGTTTTAATTTATAAAGGA
TACAAGACATGCAGGCT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR010530B12D