Cicer_arietinum_v1_Contig2324

Contig Overview
NameCicer_arietinum_v1_Contig2324
Unique NameCicer_arietinum_v1_Contig2324
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length594
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR395837ESTGR395837:1..507 +
CK148888ESTCK148888:149..524 -
CK148978ESTCK148978:149..492 +
CK149084ESTCK149084:149..491 -
CK149058ESTCK149058:149..491 -
CK149059ESTCK149059:149..491 +
CK149020ESTCK149020:149..491 -
CK148911ESTCK148911:148..490 +
CK149019ESTCK149019:149..491 +
HO214291ESTHO214291:235..491 -
GR917554ESTGR917554:138..596 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR395837GR395837Cicer arietinumEST
CK148888CK148888Cicer arietinumEST
CK148978CK148978Cicer arietinumEST
CK149084CK149084Cicer arietinumEST
CK149058CK149058Cicer arietinumEST
CK149059CK149059Cicer arietinumEST
CK149020CK149020Cicer arietinumEST
CK148911CK148911Cicer arietinumEST
CK149019CK149019Cicer arietinumEST
HO214291HO214291Cicer arietinumEST
GR917554GR917554Cicer arietinumEST


InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 24..58
score: 2.7
NoneNo IPR availablePANTHERPTHR19241:SF10ATP-BINDING CASSETTE TRANSPORTER (PDR)coord: 24..58
score: 2.7
NoneNo IPR availableSEGsegsegcoord: 7..15
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2324 ID=Cicer_arietinum_v1_Contig2324; Name=Cicer_arietinum_v1_Contig2324; organism=Cicer arietinum; type=contig; length=594bp
AAACAGAACATGAACACATGGAATTTGTCCATTCAAAATGCCATAAATTT
AAGACTACTAATTTATACTCGAGTTGTTTCTACATTCTAGGCAACAAGAG
TCATCAATATCTACAAACAAGTGCAGGTTTTCATCTCTAATTCTGCTTAG
CGTGGTCGCGGCCGAGGTACACTAAATAAAATGGTGATTCGTCAGTCGCC
TAAGGATAGATCTTGCAAGGCTCTAGTGTTCTACTTTGCTGCTCCATGGT
TCTAATACAAGGCAGCTCAAACAATGTCAAACAACTCAGTGAATATACAA
GAATAAAGGGCATCTCAGTTCTAACTACTGTCACAACCAACAACAACAAG
TCTTCCCTGCTTTTTGACTAATAATTATTCGTTCACTTTCTTCAGACAGA
TATCTTCTTTAAGCGAGCAGCAATAGGCATGCCCATAAACCCAACAAACA
AGCAGAAGAACCACTGTACCTGCCCGGGCGGCCGCTCGATTGGACCATCT
ATGGATTGGTTGCATCTCAATTTGGAGATATAACTACTGTTATGCAGGAG
GAACATAAAGATGTGAAAACTTTCCTTGATGACTTTTTTGGTAT
back to top