Cicer_arietinum_v1_Contig2329

Contig Overview
NameCicer_arietinum_v1_Contig2329
Unique NameCicer_arietinum_v1_Contig2329
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length322
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR401059ESTGR401059:1..315 +
GR401122ESTGR401122:2..315 +
GR400441ESTGR400441:19..322 +
GR400849ESTGR400849:158..328 -
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR401059GR401059Cicer arietinumEST
GR401122GR401122Cicer arietinumEST
GR400441GR400441Cicer arietinumEST
GR400849GR400849Cicer arietinumEST


Homology
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BLAST of Cicer_arietinum_v1_Contig2329 vs. TrEMBL
Match: Q9AVH2_PEA (Putative senescence-associated protein (Fragment) OS=Pisum sativum GN=ssa-13 PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.102e-7
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = -3 
Query:    6 TTGARIASSPDSDLEAFSHNPTHGSFAP 89
            T GARIASSPDSDLEAFSHNPTHGSFAP
Sbjct:    1 TAGARIASSPDSDLEAFSHNPTHGSFAP 28
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2329 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
Q9AVH2_PEA1.102e-796.43Putative senescence-associated protein (Fragment) ... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2329 ID=Cicer_arietinum_v1_Contig2329; Name=Cicer_arietinum_v1_Contig2329; organism=Cicer arietinum; type=contig; length=322bp
GCGGGTGGCGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAA
GTCAGAATCCGGGCTAGAAGCGATGCGTGCGCCTGTCGTTCGCTTGCCGA
CCAGCAGTAGGGGGTCTCCACCCTCCAGAGGCACGTGCCGTTGGTGATCC
TCGTAAGGCTGATCAGCCATGCGAGACGCCTTGAAGCGCAATTCCCATCG
AGCGACGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATT
GTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTT
GTCGCTCTGATTCGTCCCTCCN
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