Cicer_arietinum_v1_Contig2342

Contig Overview
NameCicer_arietinum_v1_Contig2342
Unique NameCicer_arietinum_v1_Contig2342
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length657
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR395705ESTGR395705:1..507 -Cicer arietinum unigene v1n/a
GR912498ESTGR912498:226..650 +Cicer arietinum unigene v1n/a
GR912743ESTGR912743:229..652 -Cicer arietinum unigene v1n/a
GR912570ESTGR912570:220..657 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR395705GR395705Cicer arietinumEST
GR912498GR912498Cicer arietinumEST
GR912743GR912743Cicer arietinumEST
GR912570GR912570Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. SwissProt
Match: SPTC1_PONAB (Serine palmitoyltransferase 1 OS=Pongo abelii GN=SPTLC1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.771e-12
Identity = 36/121 (29.75%), Postives = 65/121 (53.72%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            A++++EEN  +   LK     + K L  I G  +   P SP  +L+L++STGS + D+ LL+ I ++ +        A      +KC  P  IR+ V+   +E +L +A+ +++ +A +VL
Sbjct:  352 ALNIMEENPGIFAVLKEKCRQIHKALQGISGLKVVGEPLSPAFHLQLEESTGSREQDVRLLQEIVDQCMNRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTEEELDRAASTIKEVAQAVL 472
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. SwissProt
Match: SPTC1_HUMAN (Serine palmitoyltransferase 1 OS=Homo sapiens GN=SPTLC1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.360e-11
Identity = 35/121 (28.93%), Postives = 64/121 (52.89%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            A++++EEN  +   LK     + K L  I G  +     SP  +L+L++STGS + D+ LL+ I ++ +        A      +KC  P  IR+ V+   +E +L +A+ +++ +A +VL
Sbjct:  352 ALNIMEENPGIFAVLKEKCGQIHKALQGISGLKVVGESLSPAFHLQLEESTGSREQDVRLLQEIVDQCMNRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTEEELERAASTIKEVAQAVL 472
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. SwissProt
Match: SPTC1_MACFA (Serine palmitoyltransferase 1 OS=Macaca fascicularis GN=SPTLC1 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.845e-10
Identity = 34/121 (28.10%), Postives = 63/121 (52.07%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            A++++EEN  +   LK     + K L  I G  +     SP  +L+L++STGS + D+ LL+ I ++ +        A      +KC  P  IR+ V+   +  +L +A+ +++ +A +VL
Sbjct:  352 ALNIMEENPGIFAVLKEKCRQIHKALQGISGLKVVGESLSPAFHLQLEESTGSREQDVRLLQEIVDQCMDRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTAEELERAASTIKEVAQAVL 472
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. SwissProt
Match: SPTC1_MOUSE (Serine palmitoyltransferase 1 OS=Mus musculus GN=Sptlc1 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.853e-10
Identity = 34/121 (28.10%), Postives = 65/121 (53.72%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            A++++EEN ++   LK     + K L  + G  +     SP ++L+L++STGS + D+ LL+ I ++ + +      A      +KC  P  IR+ V+   +E +L +A+ ++   A +VL
Sbjct:  352 ALNIMEENPDIFAVLKKKCQNIHKSLQGVSGLKVVGESLSPALHLQLEESTGSREKDVKLLQAIVDQCMDKGIALTQARYLDKEEKCLPPPSIRVVVTVEQTEEELQRAASTIREAAQAVL 472
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. SwissProt
Match: SPTC1_CRIGR (Serine palmitoyltransferase 1 OS=Cricetulus griseus GN=SPTLC1 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 6.338e-10
Identity = 35/121 (28.93%), Postives = 62/121 (51.24%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            A++++EEN  +   LK     + K L  I G  +     SP ++L+L++STGS + D+ LL+ +    + E      A      +KC  P  IR+ V+   +E +L +A+ ++   A +VL
Sbjct:  352 ALNIMEENPGIFAVLKKKCQHIHKSLQGISGLKVVGESLSPALHLQLEESTGSREKDVQLLQEMVIHCMNEGIALTQARYLDKEEKCLPPPSIRVVVTVEQTEEELERAASTIREAAQAVL 472
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. SwissProt
Match: SPTC1_BOVIN (Serine palmitoyltransferase 1 OS=Bos taurus GN=SPTLC1 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 1.081e-9
Identity = 35/121 (28.93%), Postives = 62/121 (51.24%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            A++++EEN  +   LK     + K L  IPG  +     SP ++L+L+++TG  + D+ LL+ I  + +        A      +K   P  IR+ V+   +E DL KA+ ++  +A +VL
Sbjct:  352 ALNIMEENPGIFAVLKEKCKRIHKALQGIPGLKVVGESISPALHLQLEETTGCRERDVKLLQEIVTQCMDRGIALTQARYLEKEEKYLPPPSIRVVVTVEQTEEDLEKAASTISEVAQTVL 472
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. SwissProt
Match: LCB1_SCHPO (Serine palmitoyltransferase 1 OS=Schizosaccharomyces pombe GN=lcb1 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 3.845e-7
Identity = 35/125 (28.00%), Postives = 62/125 (49.60%), Query Frame = -3 
Query:  257 AIDVLE-ENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVLDGH 628
            AI +L  +  ++L  L++  A+    L +   F  +S  ESPI++LR K    S    + LLE I E  + E  +   A R  +L++ ++   +R+ +S GHS  ++ K +  ++     V D H
Sbjct:  379 AISILSRDGGSMLNDLRSKSALFHAKLSRNKFFETSSDIESPIIHLRFKDKDISHDKQVFLLEEIVELCIAEGFLIARAKRVESLERVKVQPSLRICISTGHSAEEIEKLALLIKEKTEIVFDKH 503
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TrEMBL
Match: B7FLC7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.665e-53
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            AIDVL+EN N+LTKLKNNIAVLWKGLL+IPGFTI SHPESPIVYLR+KKSTGSL DDL LLENIAERVLKEDSV+V  SRRSTLDKCRLPVGIRLFVSAGHSESD+HKASESL+R+AA VL
Sbjct:  360 AIDVLDENPNILTKLKNNIAVLWKGLLEIPGFTIVSHPESPIVYLRIKKSTGSLNDDLRLLENIAERVLKEDSVFVATSRRSTLDKCRLPVGIRLFVSAGHSESDVHKASESLKRVAALVL 480
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TrEMBL
Match: B9N3B5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_784125 PE=4 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.254e-42
Identity = 88/121 (72.73%), Postives = 106/121 (87.60%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            AI+VLE+N  L+TKLK NI+VLWKGL  I G +IAS+PESPIV+L+L+ STGS+KDDL LLE IA+R LKEDSV+ V S+RST+DKCRLPVGIRLFVSA HS+SDL KASESL+R++ASVL
Sbjct:  359 AINVLEDNPALITKLKENISVLWKGLSSIQGLSIASNPESPIVFLKLEMSTGSMKDDLQLLEAIADRALKEDSVFFVTSKRSTIDKCRLPVGIRLFVSAAHSDSDLLKASESLKRVSASVL 479
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TrEMBL
Match: D7TB41_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_130.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000259001 PE=4 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.137e-41
Identity = 89/123 (72.36%), Postives = 106/123 (86.18%), Query Frame = -3 
Query:  260 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVLDG 628
            A+DVLEEN +L+ KLK NIAVLW+ L  I G +IAS+P SPIV+LRL+ STGSLK+DLHLLE+I +R+L +DSV+VVAS+RSTLDKCRLPVGIRL VSA H+ESDL KASESL+R AASVL G
Sbjct:  359 AVDVLEENPDLIMKLKENIAVLWQELSDIQGLSIASNPLSPIVFLRLENSTGSLKNDLHLLEDIVDRMLNKDSVFVVASKRSTLDKCRLPVGIRLLVSAAHTESDLLKASESLKRAAASVLGG 481
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TrEMBL
Match: B9RWA7_RICCO (Serine palmitoyltransferase I, putative OS=Ricinus communis GN=RCOM_1176940 PE=4 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.033e-40
Identity = 86/121 (71.07%), Postives = 104/121 (85.95%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            AIDVLE+N  L+TKLK NIAVLWKGL  I G +IAS+PESPIV+LRL+ +TGS+K DL LLE+IA+R LKEDSV+VV S+RSTLDKCRLPV I+L+VSA HSE+DL KA ESL+R++A VL
Sbjct:  360 AIDVLEDNPALITKLKENIAVLWKGLCNIQGLSIASNPESPIVFLRLENTTGSVKGDLKLLEDIADRALKEDSVFVVVSKRSTLDKCRLPVAIKLYVSAAHSEADLIKACESLKRVSALVL 480
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TrEMBL
Match: B9I4S7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_772231 PE=4 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.655e-40
Identity = 86/121 (71.07%), Postives = 103/121 (85.12%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            AIDVLE+N  L+ KLK NIA+LWKGL  I G +I+S+P+SPIV+L L+KSTGS KDDL LLE +A+R LKEDSV+VV ++RSTLDKCRLPVGIRLFVSA HS+SDL KA ESL+R+AA VL
Sbjct:  359 AIDVLEDNPALIEKLKENIAILWKGLSNIQGLSISSNPKSPIVFLNLEKSTGSTKDDLKLLEAMADRALKEDSVFVVTTKRSTLDKCRLPVGIRLFVSAAHSDSDLLKACESLKRVAALVL 479
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TrEMBL
Match: D7MBH5_ARALY (ATLCB1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_912719 PE=4 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.231e-38
Identity = 80/121 (66.12%), Postives = 104/121 (85.95%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            AIDV+++N ++L KLK NIA+LWKGL  I G ++ S+ ESPIV+L+L+KS+GS KDDL LLE +A+R LKEDS+ VV+S+RS LDKCRLPVGI+L+VSAGHSESDL KASESL+R+A+ +L
Sbjct:  359 AIDVIDQNPDMLVKLKQNIALLWKGLSDIKGMSLTSNRESPIVFLKLEKSSGSAKDDLLLLEEMADRALKEDSLLVVSSKRSFLDKCRLPVGIKLYVSAGHSESDLLKASESLKRLASELL 479
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TrEMBL
Match: Q94IB8_ARATH (Serine C-palmitoyltransferase like protein OS=Arabidopsis thaliana GN=AtLCB1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.444e-38
Identity = 79/121 (65.29%), Postives = 104/121 (85.95%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            AIDV+++N ++L KLK N+A+LWKGL  I G ++ S+ ESPIV+L+L+KS+GS KDDL LLE +A+R LKEDS+ VV+S+RS LDKCRLPVGI+L+VSAGHSESDL KASESL+R+A+ +L
Sbjct:  359 AIDVIDQNPDMLVKLKQNVALLWKGLSDIKGMSLTSNRESPIVFLKLEKSSGSAKDDLLLLEKMADRALKEDSLLVVSSKRSFLDKCRLPVGIKLYVSAGHSESDLLKASESLKRLASELL 479
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TrEMBL
Match: B9DHA0_ARATH (AT4G36480 protein OS=Arabidopsis thaliana GN=AT4G36480 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.444e-38
Identity = 79/121 (65.29%), Postives = 104/121 (85.95%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            AIDV+++N ++L KLK N+A+LWKGL  I G ++ S+ ESPIV+L+L+KS+GS KDDL LLE +A+R LKEDS+ VV+S+RS LDKCRLPVGI+L+VSAGHSESDL KASESL+R+A+ +L
Sbjct:  359 AIDVIDQNPDMLVKLKQNVALLWKGLSDIKGMSLTSNRESPIVFLKLEKSSGSAKDDLLLLEKMADRALKEDSLLVVSSKRSFLDKCRLPVGIKLYVSAGHSESDLLKASESLKRLASELL 479
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TrEMBL
Match: B5LED9_BRARC (Serine palmitoyltransferase long chain base subunit OS=Brassica rapa subsp. chinensis GN=LCB1 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.611e-37
Identity = 79/121 (65.29%), Postives = 103/121 (85.12%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            AIDV+++N  LL K+K+NIA+LWKGL  I G ++AS PESPIV+L+L+KS+GS K+DL LLE +A+R LKEDS+ VV+S++S LDKCRLPVGI+L VSAGHSESDL K SESL+R+A+ +L
Sbjct:  359 AIDVIDQNPELLVKMKHNIALLWKGLKDIKGMSLASDPESPIVFLKLEKSSGSTKEDLLLLEKMADRALKEDSLLVVSSKKSFLDKCRLPVGIKLLVSAGHSESDLVKVSESLKRLASELL 479
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TrEMBL
Match: Q948H0_ORYSA (Putative serine palmitoyltransferase OS=Oryza sativa GN=OSJNBa0049O12.4 PE=4 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.274e-34
Identity = 77/121 (63.64%), Postives = 98/121 (80.99%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            A+D LEEN ++L  L++NI +L K L  + G  IAS+  SPIV+L+LK STGS   DL LLE I+E+VLKEDSV++ A++RS+LDKCRLPVGIRLFVSAGH+ESD+ K SESL+R+AASVL
Sbjct:  446 AVDHLEENPSVLANLRSNITLLHKELSDVQGLEIASNILSPIVFLKLKTSTGSAVADLELLEVISEKVLKEDSVFIAATKRSSLDKCRLPVGIRLFVSAGHTESDILKVSESLKRVAASVL 566
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TAIR peptide
Match: AT4G36480.2 (| Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain base1 | chr4:17218598-17221124 FORWARD LENGTH=482)

HSP 1 Score: 160.614 bits (405), Expect = 6.718e-40
Identity = 79/121 (65.29%), Postives = 104/121 (85.95%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            AIDV+++N ++L KLK N+A+LWKGL  I G ++ S+ ESPIV+L+L+KS+GS KDDL LLE +A+R LKEDS+ VV+S+RS LDKCRLPVGI+L+VSAGHSESDL KASESL+R+A+ +L
Sbjct:  359 AIDVIDQNPDMLVKLKQNVALLWKGLSDIKGMSLTSNRESPIVFLKLEKSSGSAKDDLLLLEKMADRALKEDSLLVVSSKRSFLDKCRLPVGIKLYVSAGHSESDLLKASESLKRLASELL 479
[Close]
BLAST of Cicer_arietinum_v1_Contig2342 vs. TAIR peptide
Match: AT4G36480.1 (| Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain base1 | chr4:17218598-17221124 FORWARD LENGTH=482)

HSP 1 Score: 160.614 bits (405), Expect = 6.718e-40
Identity = 79/121 (65.29%), Postives = 104/121 (85.95%), Query Frame = -3 
Query:  266 AIDVLEENSNLLTKLKNNIAVLWKGLLKIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVYVVASRRSTLDKCRLPVGIRLFVSAGHSESDLHKASESLERIAASVL 628
            AIDV+++N ++L KLK N+A+LWKGL  I G ++ S+ ESPIV+L+L+KS+GS KDDL LLE +A+R LKEDS+ VV+S+RS LDKCRLPVGI+L+VSAGHSESDL KASESL+R+A+ +L
Sbjct:  359 AIDVIDQNPDMLVKLKQNVALLWKGLSDIKGMSLTSNRESPIVFLKLEKSSGSAKDDLLLLEKMADRALKEDSLLVVSSKRSFLDKCRLPVGIKLYVSAGHSESDLLKASESLKRLASELL 479
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2342 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
SPTC1_PONAB6.771e-1229.75Serine palmitoyltransferase 1 OS=Pongo abelii GN=S... [more]
SPTC1_HUMAN3.360e-1128.93Serine palmitoyltransferase 1 OS=Homo sapiens GN=S... [more]
SPTC1_MACFA2.845e-1028.10Serine palmitoyltransferase 1 OS=Macaca fascicular... [more]
SPTC1_MOUSE4.853e-1028.10Serine palmitoyltransferase 1 OS=Mus musculus GN=S... [more]
SPTC1_CRIGR6.338e-1028.93Serine palmitoyltransferase 1 OS=Cricetulus griseu... [more]
SPTC1_BOVIN1.081e-928.93Serine palmitoyltransferase 1 OS=Bos taurus GN=SPT... [more]
LCB1_SCHPO3.845e-728.00Serine palmitoyltransferase 1 OS=Schizosaccharomyc... [more]
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BLAST of Cicer_arietinum_v1_Contig2342 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FLC7_MEDTR4.665e-5387.60Putative uncharacterized protein OS=Medicago trunc... [more]
B9N3B5_POPTR8.254e-4272.73Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TB41_VITVI3.137e-4172.36Whole genome shotgun sequence of line PN40024, sca... [more]
B9RWA7_RICCO2.033e-4071.07Serine palmitoyltransferase I, putative OS=Ricinus... [more]
B9I4S7_POPTR2.655e-4071.07Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7MBH5_ARALY7.231e-3866.12ATLCB1 OS=Arabidopsis lyrata subsp. lyrata GN=ARAL... [more]
Q94IB8_ARATH9.444e-3865.29Serine C-palmitoyltransferase like protein OS=Arab... [more]
B9DHA0_ARATH9.444e-3865.29AT4G36480 protein OS=Arabidopsis thaliana GN=AT4G3... [more]
B5LED9_BRARC1.611e-3765.29Serine palmitoyltransferase long chain base subuni... [more]
Q948H0_ORYSA8.274e-3463.64Putative serine palmitoyltransferase OS=Oryza sati... [more]
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BLAST of Cicer_arietinum_v1_Contig2342 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G36480.26.718e-4065.29| Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-cha... [more]
AT4G36480.16.718e-4065.29| Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-cha... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2GENE3D3.90.1150.10no descriptioncoord: 8..122
score: 1.6
IPR015424Pyridoxal phosphate-dependent transferase, major domainSUPERFAMILY53383PLP-dependent transferasescoord: 7..126
score: 2.6
NoneNo IPR availablePANTHERPTHR13693CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASEcoord: 7..130
score: 1.2
NoneNo IPR availablePANTHERPTHR13693:SF2SERINE PALMITOYLTRANSFERASE Icoord: 7..130
score: 1.2

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2342 ID=Cicer_arietinum_v1_Contig2342; Name=Cicer_arietinum_v1_Contig2342; organism=Cicer arietinum; type=contig; length=657bp
GAGCCTAATGTAATTCAAGCATTTCCCCAAATAATGATTAGAAACTTAAA
ATCCTTATTCCACCACTTAACACATCAAAGAATAGCACAGGCCAAAAAAT
ACTGTCACCCTAAGCTAGCGGAGAAAATATTACATAAATTACCAGCTACA
AGACTTCCTTTATCAGCCTGAATTTCAAAATTGCTCACCTAAAAGTGGAA
TAGAACTGACATTTTGGTACAAGAAGAAGCAGAAGAGAGGTGTACATTGT
TCAATCATGACCATCAAGGACTGACGCCGCAATCCTTTCCAATGATTCAG
ATGCCTTGTGAAGATCAGACTCTGAATGCCCTGCAGAAACAAACAATCTA
ATTCCTACAGGCAATCGACACTTGTCCAATGTTGATCTTCTGGAAGCCAC
CACATATACAGAATCTTCTTTCAAAACGCGCTCGGCAATATTTTCAAGCA
GATGTAGGTCATCTTTCAAAGAACCCGTTGACTTCTTTAATCTCAAATAA
ACAATTGGTGACTCTGGATGACTTGCAATTGTGAAGCCTGGTATTTTCAA
CAGCCCTTTCCATAACACAGCAATGTTGTTCTTCAACTTAGTTAACAGAT
TGGAATTTTCCTCAAGGACATCAATAGCACCTCGGCCGCGACCACGCTAA
TCGAATT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
Vocabulary: INTERPRO
TermDefinition
IPR015422PyrdxlP-dep_Trfase_small
IPR015424PyrdxlP-dep_Trfase