Cicer_arietinum_v1_Contig2346

Contig Overview
NameCicer_arietinum_v1_Contig2346
Unique NameCicer_arietinum_v1_Contig2346
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length812
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR395678ESTGR395678:1..185 +Cicer arietinum unigene v1n/a
GR401813ESTGR401813:118..678 +Cicer arietinum unigene v1n/a
GR404055ESTGR404055:118..615 +Cicer arietinum unigene v1n/a
GR421028ESTGR421028:118..678 +Cicer arietinum unigene v1n/a
GR401814ESTGR401814:120..812 -Cicer arietinum unigene v1n/a
GR402190ESTGR402190:249..812 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR395678GR395678Cicer arietinumEST
GR401813GR401813Cicer arietinumEST
GR404055GR404055Cicer arietinumEST
GR421028GR421028Cicer arietinumEST
GR401814GR401814Cicer arietinumEST
GR402190GR402190Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TrEMBL
Match: C6TNL9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 9.118e-48
Identity = 100/143 (69.93%), Postives = 117/143 (81.82%), Query Frame = -3 
Query:  346 LITQGV-MFLAIASLAAGSHGISSRSILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNST-VAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGNAYDCIAGLNKFIAVPSTRS 768
            ++ QGV +FL I  + A S     R+ILVGDS+GW AGTNYTQW+I+NSPF INDTL+FKYP  GNST +AQSVYLLPN WSY+TCEFRGAKLLG+  +G GEG K++LNQ  KPYYFASAEGN YDCIAGL+KF+AVPST S
Sbjct:    6 ILAQGVFVFLVITCVGAESE---PRTILVGDSQGWQAGTNYTQWAIQNSPFHINDTLLFKYP--GNSTTLAQSVYLLPNQWSYITCEFRGAKLLGNATEGDGEGFKVELNQ-LKPYYFASAEGNFYDCIAGLSKFVAVPSTSS 142
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TrEMBL
Match: A5AWI3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011906 PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 8.574e-30
Identity = 69/136 (50.74%), Postives = 87/136 (63.97%), Query Frame = -3 
Query:  349 GVMFLAIASLAAGSHGISSRSILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGNAYDCIAGLNKFIAVPSTR 756
            G + L  A + A S    + +I+VG SE WH G NYT WSI++SPF IND LVFKY PP  +    SVYLLPN+WS++TC+F  AKLL +P QG G+G   +L  W +P+YFAS E +   C  G  KF AVP  R
Sbjct:   11 GFILLLAACMVAVSE---ADTIVVGGSEHWHYGFNYTYWSIQHSPFFINDKLVFKYNPPSKNXPRHSVYLLPNLWSFVTCDFSQAKLLANPQQGGGKGFVFELTNW-RPHYFASGEEDGSQCGDGRMKFFAVPLPR 142
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TrEMBL
Match: A5AWI4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011907 PE=4 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 7.258e-29
Identity = 70/140 (50.00%), Postives = 87/140 (62.14%), Query Frame = -3 
Query:  349 GVMFLA---IASLAAGSHGISSR-SILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGNAYDCIAGLNKFIAVPSTR 756
            G+ F+A   I  L A S  IS   +I+VG SE W  G NYT WS+++ PF IND LVFKY PP  +    SVYLLPN+WS+ TC+F  AKLL +P QG G+G   +L  W +P+YFAS E +   C  G  KF AVP  R
Sbjct:    4 GISFVAPGLILLLTACSLAISETDTIVVGGSENWRYGFNYTGWSLQHGPFYINDKLVFKYNPPSKNNSRHSVYLLPNLWSFATCDFSQAKLLANPQQGGGKGFVFELTNW-RPHYFASGEEDGSQCEDGQMKFFAVPLPR 142
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TrEMBL
Match: A5AWI2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011905 PE=4 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 7.258e-29
Identity = 65/139 (46.76%), Postives = 87/139 (62.59%), Query Frame = -3 
Query:  364 MSRILITQGVMFLAIASLAAGSHGISSRSILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGNAYDCIAGLNKFIA 780
            M       G++ L  A + A S    + +I+VG S+ WH G NYT WSI++ PF IND LVFKY PP  +    SVYLLPN+WS++TC+F  AKLL +P QG G+G   +L  W +P+YFAS E +   C+ G+ K IA
Sbjct:    3 MGTXFAAPGLILLLTACMVAVSE---ADTIVVGGSDHWHYGFNYTYWSIQHGPFHINDKLVFKYNPPSKNNPRHSVYLLPNLWSFVTCDFSQAKLLANPQQGGGKGFVFELTNW-RPHYFASGEEHGSQCVNGICKRIA 137
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TrEMBL
Match: C6T4R3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.869e-25
Identity = 54/119 (45.38%), Postives = 74/119 (62.18%), Query Frame = -3 
Query:  343 RSILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGNAYDCIAGLNKFIAVPSTRSF 699
            + I+VG SE WH   NYT W+ K++PF +NDTLVFKY  P  ++   SVY+  +  S++ C+   AK+L +P+QG GEG K  L +W KP+YFA  E N + C  G  KF  +P  R F
Sbjct:   55 KQIVVGGSEHWHYRFNYTDWAFKSAPFYLNDTLVFKYDAPNATSFPHSVYMFKSFGSFLKCDIEKAKMLANPMQGTGEGFKFVLKRW-KPHYFACGERNGFHCNNGTMKFAVMPMIRPF 172
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TrEMBL
Match: D7TPN2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031793001 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 6.359e-25
Identity = 53/114 (46.49%), Postives = 70/114 (61.40%), Query Frame = -3 
Query:  358 RSILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGNAYDCIAGLNKFIAVP 699
            +  +VG SE W  G NYT W++ N PF +NDTLVFKY PP  +T   SVYLLPN WS++TC+   A+ + +  QG GEG +  L  W  P+YFA  E +   C  G+ KF  +P
Sbjct:   66 KKFIVGGSEHWRYGFNYTDWALNNGPFYVNDTLVFKYDPPSKTTFPHSVYLLPNPWSFLTCDLSKAEQVATVAQGGGEGFEFVLKNW-WPHYFACGEHDGLHCKEGMMKFFVMP 178
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TrEMBL
Match: B9HRX0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_767530 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.850e-24
Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = -3 
Query:  349 ILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNS-TVAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGNAYDCIAGLNKFIAVPSTR 693
            I+VG S+ W  G NY  W++KN PF  NDTLVFKY PP ++ T   SVYLLPN+WS++ C+   AKL+ S  QG G+G +  L  W +P+YFA   G  + C  G  KF  +P  R
Sbjct:   53 IVVGGSQNWTFGINYADWALKNGPFYFNDTLVFKYDPPSDTNTHPHSVYLLPNLWSFLKCDLSRAKLVASETQGGGDGFEFVLKSW-QPHYFACGGGAGFHCNNGTMKFFVMPMFR 167
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TrEMBL
Match: A5BS00_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035939 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 9.182e-24
Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = -3 
Query:  358 RSILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGNAYDCIAGLNKFIAVP 699
            +  +VG S+ W  G NYT W++ N PF +NDTLVFKY PP  +T   SVYLLPN+ S+MTC+   A+ + +  QG GEG +  L  W  P+YFA  E +   C  G+ KF  +P
Sbjct:   65 KKFIVGGSDHWRYGFNYTDWALNNGPFYVNDTLVFKYDPPSKTTFPHSVYLLPNLRSFMTCDLSRAEQVATVAQGGGEGFEFVLKNW-WPHYFACGEHDGLHCKEGMMKFFVMP 177
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TrEMBL
Match: D7TPN6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031797001 PE=4 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.566e-23
Identity = 56/118 (47.46%), Postives = 72/118 (61.02%), Query Frame = -3 
Query:  349 RSILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQL-NQWKKPYYFASAEGNAYDCIAGLNKFIAVPSTR 699
            +  +VG SE W  G NYT W++KN PF INDTLVFKY PP ++T   SVYLLPN  S++TC+   AK + +  QG  +G +  L N W  P+YFA  E N   C  G+ KF  +P  R
Sbjct:   62 KKFIVGGSERWRYGFNYTDWALKNGPFYINDTLVFKYDPPNSTTFPHSVYLLPNFGSFLTCDLSRAKQVATVAQGGSKGFEFVLKNLW--PHYFACGEHNGLHCKEGMMKFSVMPLFR 177
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TrEMBL
Match: D7TPN4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031795001 PE=4 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.566e-23
Identity = 56/118 (47.46%), Postives = 72/118 (61.02%), Query Frame = -3 
Query:  349 RSILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQL-NQWKKPYYFASAEGNAYDCIAGLNKFIAVPSTR 699
            +  +VG SE W  G NYT W++KN PF INDTLVFKY PP ++T   SVYLLPN  S++TC+   AK + +  QG  +G +  L N W  P+YFA  E N   C  G+ KF  +P  R
Sbjct:   62 KKFIVGGSERWRYGFNYTDWALKNGPFYINDTLVFKYDPPNSTTFPHSVYLLPNFGSFLTCDLSRAKQVATVAQGGSKGFEFVLKNLW--PHYFACGEHNGLHCKEGMMKFSVMPLFR 177
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TAIR peptide
Match: AT2G15780.1 (| Symbols: | Cupredoxin superfamily protein | chr2:6873666-6874701 REVERSE LENGTH=257)

HSP 1 Score: 99.7525 bits (247), Expect = 1.954e-21
Identity = 51/114 (44.74%), Postives = 65/114 (57.02%), Query Frame = -3 
Query:  358 RSILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGNAYDCIAGLNKFIAVP 699
            R I+VG  + W  G NY  W+ K +PF +ND LVFKY PP   T   SVYLLPN  SY  C+ +  K++ SP QG G+G +  L Q  KPYY +  E +   C  G  KF  +P
Sbjct:  142 RKIIVGGDKEWTYGFNYADWASKTAPFFLNDILVFKYNPPAPFT--HSVYLLPNPSSYEKCDVKKGKMIASPKQGAGKGFEFVLKQ-MKPYYISCGEHDGAHCSNGTMKFTVMP 252
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TAIR peptide
Match: AT2G15770.1 (| Symbols: | Cupredoxin superfamily protein | chr2:6871257-6872245 REVERSE LENGTH=301)

HSP 1 Score: 86.2705 bits (212), Expect = 2.235e-17
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = -3 
Query:  358 RSILVGDSEGWHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQSVYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGNAYDCIAGLNKFIAVP 699
            + I+VG S+GW  G +Y  W+ KN+PF +ND LVFKY    ++    +VYL  + WSYM C+ + A+ +GS  +G  E     L +  +PY+FAS E +   C     KF   P
Sbjct:  144 KKIIVGGSDGWKKGLDYKDWASKNAPFYVNDVLVFKYDK--SAKRRNNVYLFKDRWSYMNCDIKNARKIGSTRKGSEESFNFTLKK-IQPYFFASGEHDGDYCRNHNMKFTIFP 254
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TAIR peptide
Match: AT4G33930.1 (| Symbols: | Cupredoxin superfamily protein | chr4:16264389-16265420 REVERSE LENGTH=343)

HSP 1 Score: 57.7658 bits (138), Expect = 8.514e-9
Identity = 36/100 (36.00%), Postives = 49/100 (49.00%), Query Frame = -3 
Query:  403 WHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQS-----------VYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGN 669
            W  G  YT+W+ K++PF ++D LVFKY    N    QS           VYLLP+M S+  C     K L +       G K+ L +  + YYFAS + N
Sbjct:  229 WKNGYGYTEWTAKHAPFYVSDVLVFKY---NNDDQTQSKTKHRNKKKNDVYLLPDMKSFKRCNVARGKKLVARGGSSSRGFKLLLRK-VQTYYFASGDHN 324
[Close]
BLAST of Cicer_arietinum_v1_Contig2346 vs. TAIR peptide
Match: AT4G34300.1 (| Symbols: | Cupredoxin superfamily protein | chr4:16412773-16413714 FORWARD LENGTH=313)

HSP 1 Score: 55.8398 bits (133), Expect = 3.235e-8
Identity = 37/105 (35.24%), Postives = 49/105 (46.67%), Query Frame = -3 
Query:  391 WHAGTNYTQWSIKNSPFRINDTLVFKYPPPGNSTVAQS------------VYLLPNMWSYMTCEFRGAKLLGSPVQGVGEGLKIQLNQWKKPYYFASAEGNAYDC 669
            W  G  YT+W+ K++PF +ND LVF Y    N+   QS            VYLLP+M S+  C     K L +       G K+ L +    YYF S + N  DC
Sbjct:  198 WKNGYGYTEWTAKHAPFYVNDVLVFTY---NNNDQTQSKTKHHHDKKKNDVYLLPDMKSFKRCNVARGKKLVARGGSSSRGFKLLLRK-VHTYYFVSGDHN--DC 296
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2346 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TNL9_SOYBN9.118e-4869.93Putative uncharacterized protein OS=Glycine max PE... [more]
A5AWI3_VITVI8.574e-3050.74Putative uncharacterized protein OS=Vitis vinifera... [more]
A5AWI4_VITVI7.258e-2950.00Putative uncharacterized protein OS=Vitis vinifera... [more]
A5AWI2_VITVI7.258e-2946.76Putative uncharacterized protein OS=Vitis vinifera... [more]
C6T4R3_SOYBN4.869e-2545.38Putative uncharacterized protein OS=Glycine max PE... [more]
D7TPN2_VITVI6.359e-2546.49Whole genome shotgun sequence of line PN40024, sca... [more]
B9HRX0_POPTR1.850e-2447.41Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5BS00_VITVI9.182e-2445.61Putative uncharacterized protein OS=Vitis vinifera... [more]
D7TPN6_VITVI1.566e-2347.46Whole genome shotgun sequence of line PN40024, sca... [more]
D7TPN4_VITVI1.566e-2347.46Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of Cicer_arietinum_v1_Contig2346 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT2G15780.11.954e-2144.74| Symbols: | Cupredoxin superfamily protein | chr... [more]
AT2G15770.12.235e-1738.60| Symbols: | Cupredoxin superfamily protein | chr... [more]
AT4G33930.18.514e-936.00| Symbols: | Cupredoxin superfamily protein | chr... [more]
AT4G34300.13.235e-835.24| Symbols: | Cupredoxin superfamily protein | chr... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008972CupredoxinGENE3D2.60.40.420no descriptioncoord: 35..147
score: 3.4
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 32..148
score: 8.3
NoneNo IPR availablePROFILEPS51485PHYTOCYANINcoord: 34..148
score: 21

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2346 ID=Cicer_arietinum_v1_Contig2346; Name=Cicer_arietinum_v1_Contig2346; organism=Cicer arietinum; type=contig; length=812bp
AAAAATGAGGCATGGTAAACTTTTCATTAAAATATACTGTAAAATAAGAG
TTCTCTATTCATGTCAACTATTCAAAATGGGCCTAAACAAATGAAAATGT
TCACAGCCGTTTAGTGTGAAGCCCATCAAAATTGAACTTAGTTTATTTAT
TAATAAAACAGTAACAGAGAAAAATACAACATCATATTTATCTAGGTGGC
ACAAACCAACACCTTATGAATCGATTAATTCAAATATGTTATGTTTGTGT
ATTTGAGAATATTGAAGGTGAAACAAGAAAAACCATAAAACAAAATCACA
TGATTTAATTGGGCCATGAGAGTGAGAAAGGAAATTGGGCTAAAAGGAAC
GAGTAGATGGAACAGCAATGAACTTGTTGAGTCCAGCAATACAGTCATAG
GCATTTCCTTCAGCAGATGCAAAGTAGTAAGGCTTCTTCCATTGATTGAG
CTGAATCTTTAAGCCCTCACCAACACCTTGAACAGGGCTTCCAAGTAGCT
TTGCTCCTCTAAATTCACATGTCATGTAGCTCCACATGTTTGGTAGTAAG
TAAACGCTCTGAGCCACTGTGGAATTTCCGGGAGGGGGATACTTGAACAC
CAATGTGTCGTTTATACGGAAAGGACTATTTTTGATGGACCATTGAGTAT
AGTTAGTGCCCGCATGCCAACCTTCAGAGTCTCCAACCAAAATGCTTCTA
CTGCTTATGCCGTGGCTTCCTGCAGCCAATGAAGCAATCGCAAGGAACAT
AACTCCTTGCGTAATCAAGATTCTAGACATATGCTTCTGCATCTTTAATT
AATTAATTGATC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR008972Cupredoxin