Cicer_arietinum_v1_Contig239

Contig Overview
NameCicer_arietinum_v1_Contig239
Unique NameCicer_arietinum_v1_Contig239
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length753
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
HO064696ESTHO064696:1..753 -Cicer arietinum unigene v1n/a
GR917355ESTGR917355:374..751 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO064696HO064696Cicer arietinumEST
GR917355GR917355Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TrEMBL
Match: D7SN78_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031432001 PE=4 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 6.560e-18
Identity = 44/62 (70.97%), Postives = 54/62 (87.10%), Query Frame = 1 
Query:  220 QGQGISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGEIGGSTS 405
            QGQGI+ILG LVLKD+I VYDLAGQRIGWA+YDCS+SVNVS  + TG+SE+VN G++  S+S
Sbjct:  393 QGQGITILGDLVLKDKIFVYDLAGQRIGWANYDCSMSVNVSTRSSTGKSEFVNAGQLSESSS 454
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TrEMBL
Match: D7M1J9_ARALY (Aspartyl protease family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489138 PE=4 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.461e-17
Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 1 
Query:  220 QGQGISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGEIGGSTSLQDGLKSSKTG 438
            Q QGI+ILG LVLKD+I VYDL GQRIGWA+YDCS+SVNVSAT+ +GRSEYVN G+   +++    L     G
Sbjct:  407 QNQGITILGDLVLKDKIFVYDLVGQRIGWANYDCSMSVNVSATSSSGRSEYVNAGQFNDNSAAPQKLSLDIVG 479
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TrEMBL
Match: Q9FFC3_ARATH (Protease-like protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.493e-17
Identity = 50/92 (54.35%), Postives = 61/92 (66.30%), Query Frame = 1 
Query:  220 QGQGISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGEIGGSTSLQDGLKSSKTGFLALFVTLICCFVYL*YLF 495
            Q QGI+ILG LVLKD+I VYDL GQRIGWA+YDCS SVNVSAT+ +GRSEYVN G+   + +    L     G      TL+   ++L Y F
Sbjct:  407 QNQGITILGDLVLKDKIFVYDLVGQRIGWANYDCSTSVNVSATSSSGRSEYVNAGQFSENAAAPQKLSLDIVG-----NTLMLLLMFLRYPF 493
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TrEMBL
Match: B9SCN7_RICCO (Aspartic proteinase Asp1, putative OS=Ricinus communis GN=RCOM_0476540 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.679e-17
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 1 
Query:  223 GQGISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGEIGGSTS 405
            GQ I+ILG LVLKD+I VYD+A QR+GW +YDCS+SVNVS TT TG+SE+VN GE   + S
Sbjct:  416 GQQITILGDLVLKDKIFVYDIANQRVGWTNYDCSMSVNVSTTTNTGKSEFVNAGEFSNNNS 476

HSP 2 Score: 25.0238 bits (53), Expect = 2.679e-17
Identity = 18/55 (32.73%), Postives = 25/55 (45.45%), Query Frame = 2 
Query:   65 NPCFILNSPDGSKLFLIKSKNYWGSQGII---PLYSLSGRVFCGLKVWFTGFQKT 220
            N C+++ S   + +F   S N+ G   +I     Y L      G  VW  GFQKT
Sbjct:  361 NQCYLVTS-SVNDVFPQVSLNFAGGASLILNPQDYLLQQNSVGGAAVWCVGFQKT 414
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TrEMBL
Match: Q0WRU5_ARATH (Protease-like protein OS=Arabidopsis thaliana GN=At5g22850 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.256e-17
Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 1 
Query:  220 QGQGISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGEIGGSTSLQDGLKSSKTGFLALFVTLI 465
            Q QGI+ILG LVLKD+I VYDL GQRIGWA+YDCS SVNVSAT+ +GRSEYVN G+   + +    L     G   + + ++
Sbjct:  407 QNQGITILGDLVLKDKIFVYDLVGQRIGWANYDCSTSVNVSATSSSGRSEYVNAGQFSENAAAPQKLSLDIVGNTLMLLLMV 488
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TrEMBL
Match: B9HQS1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_875730 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.237e-16
Identity = 46/91 (50.55%), Postives = 61/91 (67.03%), Query Frame = 1 
Query:  220 QGQGISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGEI---GGSTSLQDGLKSSKTGFLALFVTLICCFVYL 483
            QGQGI+ILG LVLKD+I VYD+A QRIGWA+YDCS+SVNVS    TG+SE+VN G +   G   ++   L         L + L+ C+++L
Sbjct:  378 QGQGITILGDLVLKDKIFVYDIANQRIGWANYDCSMSVNVSTAIDTGKSEFVNAGTLSNNGSPKNMPHKLTPVTMMSFLLHMLLLSCYMFL 468
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TrEMBL
Match: B6TNP6_MAIZE (Aspartic proteinase nepenthesin-2 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.866e-15
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 1 
Query:  217 NQGQGISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTG--EIGGSTSLQDGLKSSKTGFLALFVTLI 465
            NQGQ I+ILG LVLKD+I VYDLA  R+GWADYDCS+SVNV  TT +G+++YVNTG  ++ GS            G + + V ++
Sbjct:  417 NQGQEITILGDLVLKDKIFVYDLANMRMGWADYDCSMSVNV--TTSSGKNQYVNTGQFDVNGSARRASYKSLIPAGIVTMLVHML 499
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TrEMBL
Match: B4G0K7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.866e-15
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 1 
Query:  217 NQGQGISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTG--EIGGSTSLQDGLKSSKTGFLALFVTLI 465
            NQGQ I+ILG LVLKD+I VYDLA  R+GWADYDCS+SVNV  TT +G+++YVNTG  ++ GS            G + + V ++
Sbjct:  333 NQGQEITILGDLVLKDKIFVYDLANMRMGWADYDCSMSVNV--TTSSGKNQYVNTGQFDVNGSARRASYKSLIPAGIVTMLVHML 415
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TrEMBL
Match: D7TIX3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033723001 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.747e-14
Identity = 41/64 (64.06%), Postives = 53/64 (82.81%), Query Frame = 1 
Query:  229 GISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGEIGGSTSLQDGL 420
            GI+ILG LVLKD+I VYDLA QRIGWA+YDCSLSVNVS T  +G+ E++N+G++  S+S Q+ L
Sbjct:  415 GITILGDLVLKDKIFVYDLAHQRIGWANYDCSLSVNVSVT--SGKDEFINSGQLSMSSSSQNML 476
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TrEMBL
Match: Q5ZAZ8_ORYSJ (Putative aspartic proteinase nepenthesin II OS=Oryza sativa subsp. japonica GN=P0413G02.28 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.505e-14
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 1 
Query:  217 NQGQGISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGE 387
            NQGQ I+ILG LVLKD+I VYDLA  R+GW DYDCS SVNV  TT +G+++YVNTG+
Sbjct:  417 NQGQQITILGDLVLKDKIFVYDLANMRMGWTDYDCSTSVNV--TTSSGKNQYVNTGQ 471
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TAIR peptide
Match: AT5G22850.1 (| Symbols: | Eukaryotic aspartyl protease family protein | chr5:7633717-7636298 REVERSE LENGTH=493)

HSP 1 Score: 92.8189 bits (229), Expect = 2.144e-19
Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 1 
Query:  220 QGQGISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGEIGGSTSLQDGLKSSKTGFLALFVTLI 465
            Q QGI+ILG LVLKD+I VYDL GQRIGWA+YDCS SVNVSAT+ +GRSEYVN G+   + +    L     G   + + ++
Sbjct:  407 QNQGITILGDLVLKDKIFVYDLVGQRIGWANYDCSTSVNVSATSSSGRSEYVNAGQFSENAAAPQKLSLDIVGNTLMLLLMV 488
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TAIR peptide
Match: AT1G08210.1 (| Symbols: | Eukaryotic aspartyl protease family protein | chr1:2577119-2580581 REVERSE LENGTH=492)

HSP 1 Score: 73.9442 bits (180), Expect = 1.030e-13
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 1 
Query:  232 ISILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGE 387
            I+ILG LVLKD++VVYDL  QRIGWA+YDCSL VNVSA+ G    + +NTG+
Sbjct:  411 ITILGDLVLKDKVVVYDLVRQRIGWAEYDCSLEVNVSASRGGRSKDVINTGQ 462
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TAIR peptide
Match: AT2G36670.2 (| Symbols: | Eukaryotic aspartyl protease family protein | chr2:15364949-15368016 REVERSE LENGTH=507)

HSP 1 Score: 72.7886 bits (177), Expect = 2.296e-13
Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 1 
Query:  235 SILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGEIGGSTSLQDGLKSSKTGFLALFVTLICCFVYL 483
            +ILG LVLKD++ VYDLA QRIGWA YDCS+SVNVS T+G    + VN+G+   + S +D L   +  F  LF  L+C F  L
Sbjct:  429 TILGDLVLKDKVFVYDLARQRIGWASYDCSMSVNVSITSG---KDIVNSGQPCLNISTRDIL--IRLFFSILFGLLLCIFFSL 506
[Close]
BLAST of Cicer_arietinum_v1_Contig239 vs. TAIR peptide
Match: AT2G36670.1 (| Symbols: | Eukaryotic aspartyl protease family protein | chr2:15364949-15368016 REVERSE LENGTH=512)

HSP 1 Score: 72.7886 bits (177), Expect = 2.296e-13
Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 1 
Query:  235 SILGVLVLKDRIVVYDLAGQRIGWADYDCSLSVNVSATTGTGRSEYVNTGEIGGSTSLQDGLKSSKTGFLALFVTLICCFVYL 483
            +ILG LVLKD++ VYDLA QRIGWA YDCS+SVNVS T+G    + VN+G+   + S +D L   +  F  LF  L+C F  L
Sbjct:  434 TILGDLVLKDKVFVYDLARQRIGWASYDCSMSVNVSITSG---KDIVNSGQPCLNISTRDIL--IRLFFSILFGLLLCIFFSL 511
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig239 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7SN78_VITVI6.560e-1870.97Whole genome shotgun sequence of line PN40024, sca... [more]
D7M1J9_ARALY1.461e-1761.64Aspartyl protease family protein OS=Arabidopsis ly... [more]
Q9FFC3_ARATH2.493e-1754.35Protease-like protein OS=Arabidopsis thaliana PE=4... [more]
B9SCN7_RICCO2.679e-1765.57Aspartic proteinase Asp1, putative OS=Ricinus comm... [more]
Q0WRU5_ARATH3.256e-1754.88Protease-like protein OS=Arabidopsis thaliana GN=A... [more]
B9HQS1_POPTR1.237e-1650.55Predicted protein (Fragment) OS=Populus trichocarp... [more]
B6TNP6_MAIZE8.866e-1551.76Aspartic proteinase nepenthesin-2 OS=Zea mays PE=2... [more]
B4G0K7_MAIZE8.866e-1551.76Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
D7TIX3_VITVI5.747e-1464.06Whole genome shotgun sequence of line PN40024, sca... [more]
Q5ZAZ8_ORYSJ7.505e-1468.42Putative aspartic proteinase nepenthesin II OS=Ory... [more]
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BLAST of Cicer_arietinum_v1_Contig239 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G22850.12.144e-1954.88| Symbols: | Eukaryotic aspartyl protease family ... [more]
AT1G08210.11.030e-1365.38| Symbols: | Eukaryotic aspartyl protease family ... [more]
AT2G36670.22.296e-1351.81| Symbols: | Eukaryotic aspartyl protease family ... [more]
AT2G36670.12.296e-1351.81| Symbols: | Eukaryotic aspartyl protease family ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001461Peptidase A1PANTHERPTHR13683ASPARTYL PROTEASEScoord: 25..61
score: 5.3
IPR009007Peptidase aspartic, catalyticGENE3D2.40.70.10no descriptioncoord: 27..62
score: 6
IPR021109Peptidase asparticSUPERFAMILY50630Acid proteasescoord: 27..68
score: 9.4
NoneNo IPR availablePANTHERPTHR13683:SF98CHLOROPLAST NUCLEIOD DNA-BINDING-RELATEDcoord: 25..61
score: 5.3

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig239 ID=Cicer_arietinum_v1_Contig239; Name=Cicer_arietinum_v1_Contig239; organism=Cicer arietinum; type=contig; length=753bp
ACCCCCTCCCAAAAAATTCTAGCATTATTAACCTTCAATGCACCACAAAA
TGTATTAATCAGACAACCCATGTTTTATTCTTAACTCTCCCGATGGCTCA
AAACTTTTTTTGATTAAAAGTAAAAATTACTGGGGTAGTCAAGGTATTAT
ACCCCTATACTCCCTTTCCGGCCGGGTTTTTTGCGGTTTAAAAGTGTGGT
TTACTGGCTTTCAGAAAACCAGGGTCAAGGGATATCAATTCTAGGAGTTC
TCGTTTTAAAAGACAGAATTGTTGTTTATGATCTGGCCGGTCAACGCATT
GGGTGGGCTGACTATGACTGTTCGTTATCGGTTAATGTCTCGGCAACAAC
TGGCACAGGCAGAAGTGAATACGTGAATACTGGAGAGATAGGTGGAAGTA
CTTCTTTACAGGATGGTCTTAAGTCATCAAAGACAGGGTTCTTGGCTCTC
TTTGTAACACTGATATGCTGCTTTGTGTATTTATAGTATTTATTTATGCA
TCGTGAGATATAGATCTAATATTCTTTTTCCTATGTATATTCTATTTCCA
CTACTGTATATTTGTGATAATTTGAAAAACCACATGTTATTTTCAATATT
GCTTGTGTTGTGCTTCTTTTCTGCACAATAGGTTTTTCAGGTTTAGCTTA
GATGATTCTGTTGGACACTCTCAGTCTTATAGAATCTAATCATTACTCCA
TTTGTTATTCTTTTGGCAGTTTTGTAAAGTACCTGCCCGGGCGGCCGCTC
GAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:0004190aspartic-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR001461Aspartic_peptidase_A1
IPR009007Peptidase aspartic, catalytic
IPR021109Peptidase_aspartic_dom_sf