Cicer_arietinum_v1_Contig24

Contig Overview


Name	Cicer_arietinum_v1_Contig24
Unique Name	Cicer_arietinum_v1_Contig24
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	709

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GR406726	EST	GR406726:114..490 +
EL585375	EST	EL585375:174..667 -
HO065299	EST	HO065299:138..665 +
HO066721	EST	HO066721:1..710 +
FE670888	EST	FE670888:339..695 -

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR406726	GR406726	Cicer arietinum	EST
EL585375	EL585375	Cicer arietinum	EST
HO065299	HO065299	Cicer arietinum	EST
HO066721	HO066721	Cicer arietinum	EST
FE670888	FE670888	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
Match: RS16_SPHWW (30S ribosomal protein S16 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rpsP PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18
Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = -3

Query:  369 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGL 614
            M VSIRLAR G    P+YR+VV D+++ RDG  IE +G YNP+ AKDD KRV +  +R K+WLSVGAQP++ V   L  AG+
Sbjct:    1 MAVSIRLARGGAKKRPYYRIVVADARSPRDGAFIEKIGAYNPLLAKDDPKRVVLDTDRAKHWLSVGAQPTDRVARFLDAAGV 82

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
Match: RS16_EHRRG (30S ribosomal protein S16 OS=Ehrlichia ruminantium (strain Gardel) GN=rpsP PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18
Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = -3

Query:  396 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPV 614
            M V IRLAR G    PFYRVVV DS+ ARDG+ IE+LG+YNP+  K+    + +K++R+KYWLSVGAQP+E +
Sbjct:    1 MSVKIRLARFGAKKRPFYRVVVADSRVARDGRFIELLGFYNPMLPKEHPSFLKVKIDRLKYWLSVGAQPTERI 73

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
Match: RS16_EHRRW (30S ribosomal protein S16 OS=Ehrlichia ruminantium (strain Welgevonden) GN=rpsP PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.494e-18
Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = -3

Query:  396 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPV 614
            M V IRLAR G    PFYRVVV DS+ ARDG+ IE+LG+YNP+  K+    + +K++R+KYWLSVGAQP+E +
Sbjct:    1 MSVKIRLARFGAKKRPFYRVVVADSRVARDGRFIELLGFYNPMLPKEHPSFLKVKVDRLKYWLSVGAQPTERI 73

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
Match: RS16_NOVAD (30S ribosomal protein S16 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rpsP PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.257e-18
Identity = 42/82 (51.22%), Postives = 62/82 (75.61%), Query Frame = -3

Query:  369 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGL 614
            M VS+RL+R G    P+Y++VV++S+A RDGK +E +G YNP+ AKDDE RV +  +RV+YW+ VGAQP++ V  +L +AG+
Sbjct:    1 MSVSMRLSRGGSKKRPYYKIVVSNSRAPRDGKYLEQVGTYNPLLAKDDENRVRLIEDRVRYWIGVGAQPTDRVARMLDKAGI 82

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
Match: RS16_RHOPT (30S ribosomal protein S16 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rpsP PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.256e-18
Identity = 52/108 (48.15%), Postives = 65/108 (60.19%), Query Frame = -3

Query:  291 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGLPVKRKGGAFDNYPDQPANANDKEVDG 614
            M V IRLAR G    PFY VVV DS+  RDG+ IE LGY+NP+ AKD+E R+ + L++VK WL+ GAQPS+ V   L  AG+   RK  A +N          K  DG
Sbjct:    1 MSVVIRLARAGTKKRPFYHVVVADSRFPRDGRFIERLGYFNPLMAKDNEARLKLDLDKVKDWLAKGAQPSDRVARFLDTAGV---RKREARNNPEKAVPRKERKAADG 105

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
Match: RS16_RHOPA (30S ribosomal protein S16 OS=Rhodopseudomonas palustris GN=rpsP PE=1 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 7.256e-18
Identity = 52/108 (48.15%), Postives = 65/108 (60.19%), Query Frame = -3

Query:  291 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGLPVKRKGGAFDNYPDQPANANDKEVDG 614
            M V IRLAR G    PFY VVV DS+  RDG+ IE LGY+NP+ AKD+E R+ + L++VK WL+ GAQPS+ V   L  AG+   RK  A +N          K  DG
Sbjct:    1 MSVVIRLARAGTKKRPFYHVVVADSRFPRDGRFIERLGYFNPLMAKDNEARLKLDLDKVKDWLAKGAQPSDRVARFLDTAGV---RKREARNNPEKAVPRKERKAADG 105

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
Match: RS16_EHRCR (30S ribosomal protein S16 OS=Ehrlichia chaffeensis (strain Arkansas) GN=rpsP PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.256e-18
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = -3

Query:  396 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPV 614
            M V IRLAR G    PFYRVVV DS+ ARDGK IE LG+YNP+  K+ E  V +K++R+KYWLSVGAQ ++ +
Sbjct:    1 MSVKIRLARFGAKKRPFYRVVVADSRVARDGKFIESLGFYNPMLPKEHELFVKVKVDRLKYWLSVGAQATDRI 73

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
Match: RS16_ROSDO (30S ribosomal protein S16 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rpsP PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.238e-17
Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = -3

Query:  360 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGLPVK 614
            M + IRLAR G    PFYR+V  DS+  RDG+ IE LG YNP+  KD E+RV +  ERV+YWL  GAQP++ V  +L  AGL  K
Sbjct:    1 MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDAERVQYWLGQGAQPTDRVARMLEAAGLREK 85

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
Match: RS16_RHORT (30S ribosomal protein S16 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rpsP PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.238e-17
Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = -3

Query:  303 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGLPVKRKGGAFDNYPDQPANANDK 614
            M + IRLAR G    PFYR+VV DS++ RDG+ IE LG ++P+  +D E+RV +K ERVKYWL VGA PS+ V   L  +GL   RK       P+Q   A  K
Sbjct:    1 MSLRIRLARGGAKKRPFYRIVVADSRSPRDGRFIEKLGTFDPMLPRDHERRVVLKDERVKYWLGVGALPSDRVARFLGLSGLTEARK------VPEQTKQAQPK 98

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
Match: RS16_EHRCJ (30S ribosomal protein S16 OS=Ehrlichia canis (strain Jake) GN=rpsP PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.238e-17
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = -3

Query:  396 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPV 614
            M V IRLAR G    PFYRVVV DS+ +RDGK IE LG+YNP+  K+ E  V +K++R+KYWLSVGAQ ++ V
Sbjct:    1 MSVKIRLARFGAKKRPFYRVVVADSRVSRDGKFIESLGFYNPMLPKEHELFVKVKVDRLKYWLSVGAQATDRV 73

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
Match: B3IWG1_MEDTR (30S ribosomal protein S16 OS=Medicago truncatula GN=rps16-1 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 5.152e-51
Identity = 103/125 (82.40%), Postives = 111/125 (88.80%), Query Frame = -3

Query:  252 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGLPVKRKGGAFDNYPDQPAN----ANDKEVDGISPEAVLSIGLQV 614
            MVVSIRLARLGCTHNPFYRVVVTDSK ARDGKNIEV+GYYNP+AAKDDEKRV+IKLERVKYWLSVGAQPSEPVE+LLF+AGL VKRKGG   +YP    N    +NDKEVDG+SPEAV SIGLQV
Sbjct:    1 MVVSIRLARLGCTHNPFYRVVVTDSKCARDGKNIEVVGYYNPLAAKDDEKRVNIKLERVKYWLSVGAQPSEPVESLLFKAGLQVKRKGGLSGSYPVDTPNEEQPSNDKEVDGVSPEAVFSIGLQV 125

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
Match: C6T312_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.101e-36
Identity = 85/127 (66.93%), Postives = 96/127 (75.59%), Query Frame = -3

Query:  252 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGL------PVKRKGGAFDNYPDQPANANDKEVDGISPEAVLSIGLQV 614
            MVV IRLARLGC ++PFYRVVVTDSK  RDGK  EVLG+YNP+A KDD+KR+S+KLER+KYWLSVGA+PSEPVE LLFRAGL      PV    G   N  DQP  A D   +GISPEA+ SI LQV
Sbjct:    1 MVVKIRLARLGCRNHPFYRVVVTDSKTTRDGKQPEVLGFYNPVAGKDDDKRMSLKLERIKYWLSVGAKPSEPVEHLLFRAGLGQSHQFPVAALNGHILN-QDQPTIAADH--NGISPEAIFSIALQV 124

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
Match: C5X4K2_SORBI (Putative uncharacterized protein Sb02g028880 OS=Sorghum bicolor GN=Sb02g028880 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.488e-29
Identity = 63/117 (53.85%), Postives = 83/117 (70.94%), Query Frame = -3

Query:  285 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAG-------LPVKRKGGAFDNYPDQPANANDKEVDGIS 614
            MVV IRLAR GC + PFYRV+  DS++ RDGK++EVLGYYNP+  KD  KR+ +K +RVKYWLSVGAQPS+PV+++LFRAG       L + RKGG  D  P  P      +++G++
Sbjct:    1 MVVRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVKYWLSVGAQPSDPVQSILFRAGLLPPPPMLAMARKGGPRDRRPIHPMTGRPLDLEGVT 117

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
Match: B4FVT8_MAIZE (30S ribosomal protein S16 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.488e-29
Identity = 63/117 (53.85%), Postives = 83/117 (70.94%), Query Frame = -3

Query:  285 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAG-------LPVKRKGGAFDNYPDQPANANDKEVDGIS 614
            MVV IRLAR GC + PFYRV+  DS++ RDGK++EVLGYYNP+  KD  KR+ +K +RVKYWLSVGAQPS+PV+++LFRAG       L + RKGG  D  P  P      +++G++
Sbjct:    1 MVVRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVKYWLSVGAQPSDPVQSILFRAGLLPPPPLLAMARKGGPRDRRPIHPMTGRPLDLEGVA 117

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
Match: Q0J0I9_ORYSJ (Os09g0498100 protein OS=Oryza sativa subsp. japonica GN=Os09g0498100 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.244e-29
Identity = 63/117 (53.85%), Postives = 82/117 (70.09%), Query Frame = -3

Query:  285 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAG-------LPVKRKGGAFDNYPDQPANANDKEVDGIS 614
            MVV IRLAR GC + PFYRV+  DS++ RDGK++EVLGYYNP+  KD  KR+ +K +RVKYWLSVGAQPS+PV+ +LFRAG       L + RKGG  D  P  P      +++G++
Sbjct:    1 MVVRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVKYWLSVGAQPSDPVQRILFRAGLLPPPPMLAMARKGGPRDRRPIHPMTGRPLDLEGVT 117

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
Match: A2Z2Q7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31902 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.244e-29
Identity = 63/117 (53.85%), Postives = 82/117 (70.09%), Query Frame = -3

Query:  285 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAG-------LPVKRKGGAFDNYPDQPANANDKEVDGIS 614
            MVV IRLAR GC + PFYRV+  DS++ RDGK++EVLGYYNP+  KD  KR+ +K +RVKYWLSVGAQPS+PV+ +LFRAG       L + RKGG  D  P  P      +++G++
Sbjct:    1 MVVRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVKYWLSVGAQPSDPVQRILFRAGLLPPPPMLAMARKGGPRDRRPIHPMTGRPLDLEGVT 117

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
Match: C6SXD4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.235e-28
Identity = 68/130 (52.31%), Postives = 87/130 (66.92%), Query Frame = -3

Query:  279 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGL-------PVKRKGGAFDNYP-----------DQPANANDKEVDGISPE 614
            MVV IRL+RLGC + PFYRV+  DS++ RDGK++EVLGYYNP+  +D  KR+ +  +RVKYWLSVGAQPSEPVE LLFRAG+        + RKGG  D  P           ++PA+AN+ E    +PE
Sbjct:    1 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGRVLHQEKPADANNTEQQHDTPE 130

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
Match: C6SVZ1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.106e-28
Identity = 68/130 (52.31%), Postives = 86/130 (66.15%), Query Frame = -3

Query:  279 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGL-------PVKRKGGAFDNYP-----------DQPANANDKEVDGISPE 614
            MVV IRL+RLGC + PFYRV+  DS++ RDGK++EVLGYYNP+  +D  KR+ +  +RVKYWLSVGAQPSEPVE LLFRAG+        + RKGG  D  P           ++ ANAN+ E    +PE
Sbjct:    1 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGRVLNQEKAANANNNEQQHDTPE 130

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
Match: Q84Z89_ORYSJ (30S ribosomal protein S16-like OS=Oryza sativa subsp. japonica GN=P0700D12.116 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.365e-27
Identity = 60/117 (51.28%), Postives = 81/117 (69.23%), Query Frame = -3

Query:  285 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAG-------LPVKRKGGAFDNYPDQPANANDKEVDGIS 614
            MVV IRLAR GC + PFYR++  DS++ RDGK++EVLGYY+P+  KD  KR+ +K +RVKYWLSVGAQPS+PVE +L+RAG       L +  KGG  D  P  P      +++G++
Sbjct:    1 MVVRIRLARFGCRNRPFYRLMAADSRSPRDGKHLEVLGYYDPLPGKDGGKRMGLKFDRVKYWLSVGAQPSDPVERILYRAGILPPPPMLAMAHKGGPRDRRPIDPMTGRPLDLEGVT 117

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
Match: A2YX32_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29894 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.365e-27
Identity = 60/117 (51.28%), Postives = 81/117 (69.23%), Query Frame = -3

Query:  285 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAG-------LPVKRKGGAFDNYPDQPANANDKEVDGIS 614
            MVV IRLAR GC + PFYR++  DS++ RDGK++EVLGYY+P+  KD  KR+ +K +RVKYWLSVGAQPS+PVE +L+RAG       L +  KGG  D  P  P      +++G++
Sbjct:    1 MVVRIRLARFGCRNRPFYRLMAADSRSPRDGKHLEVLGYYDPLPGKDGGKRMGLKFDRVKYWLSVGAQPSDPVERILYRAGILPPPPMLAMAHKGGPRDRRPIDPMTGRPLDLEGVT 117

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TAIR peptide
Match: AT4G34620.1 (| Symbols: SSR16 | small subunit ribosomal protein 16 | chr4:16535084-16536092 REVERSE LENGTH=113)

HSP 1 Score: 124.02 bits (310), Expect = 7.857e-29
Identity = 56/82 (68.29%), Postives = 68/82 (82.93%), Query Frame = -3

Query:  369 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGL 614
            M V IRLARLGC H PFYRVVV D K+ RDGK IEVLG+Y+P+  K+D  RVS+K +R+KYWLSVGAQP++ VE++LFRAGL
Sbjct:    1 MTVKIRLARLGCKHRPFYRVVVADEKSRRDGKQIEVLGFYDPLQGKEDADRVSLKFDRIKYWLSVGAQPTDTVESMLFRAGL 82

[Close]

BLAST of Cicer_arietinum_v1_Contig24 vs. TAIR peptide
Match: AT5G56940.1 (| Symbols: | Ribosomal protein S16 family protein | chr5:23030879-23032200 FORWARD LENGTH=135)

HSP 1 Score: 123.25 bits (308), Expect = 1.340e-28
Identity = 62/124 (50.00%), Postives = 82/124 (66.13%), Query Frame = -3

Query:  300 MVVSIRLARLGCTHNPFYRVVVTDSKAARDGKNIEVLGYYNPIAAKDDEKRVSIKLERVKYWLSVGAQPSEPVETLLFRAGL-------PVKRKGGAFDNYPDQP------------ANANDKE 614
            MVV IRL+R GC + PF+RV+  DS++ RDGK++EVLGY+NP+  +D  KR+ +K +R+KYWLSVGAQPS+PV+ LLFR+GL        + RKGGA D  P  P             NAND +
Sbjct:    1 MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNANDNQ 124

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig24 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig24 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS16_SPHWW	1.909e-18	54.88	30S ribosomal protein S16 OS=Sphingomonas wittichi...	[more]
RS16_EHRRG	1.909e-18	57.53	30S ribosomal protein S16 OS=Ehrlichia ruminantium...	[more]
RS16_EHRRW	2.494e-18	57.53	30S ribosomal protein S16 OS=Ehrlichia ruminantium...	[more]
RS16_NOVAD	3.257e-18	51.22	30S ribosomal protein S16 OS=Novosphingobium aroma...	[more]
RS16_RHOPT	7.256e-18	48.15	30S ribosomal protein S16 OS=Rhodopseudomonas palu...	[more]
RS16_RHOPA	7.256e-18	48.15	30S ribosomal protein S16 OS=Rhodopseudomonas palu...	[more]
RS16_EHRCR	7.256e-18	58.90	30S ribosomal protein S16 OS=Ehrlichia chaffeensis...	[more]
RS16_ROSDO	1.238e-17	52.94	30S ribosomal protein S16 OS=Roseobacter denitrifi...	[more]
RS16_RHORT	1.238e-17	48.08	30S ribosomal protein S16 OS=Rhodospirillum rubrum...	[more]
RS16_EHRCJ	1.238e-17	58.90	30S ribosomal protein S16 OS=Ehrlichia canis (stra...	[more]

BLAST of Cicer_arietinum_v1_Contig24 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B3IWG1_MEDTR	5.152e-51	82.40	30S ribosomal protein S16 OS=Medicago truncatula G...	[more]
C6T312_SOYBN	2.101e-36	66.93	Putative uncharacterized protein OS=Glycine max PE...	[more]
C5X4K2_SORBI	2.488e-29	53.85	Putative uncharacterized protein Sb02g028880 OS=So...	[more]
B4FVT8_MAIZE	2.488e-29	53.85	30S ribosomal protein S16 OS=Zea mays PE=2 SV=1	[more]
Q0J0I9_ORYSJ	4.244e-29	53.85	Os09g0498100 protein OS=Oryza sativa subsp. japoni...	[more]
A2Z2Q7_ORYSI	4.244e-29	53.85	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C6SXD4_SOYBN	1.235e-28	52.31	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SVZ1_SOYBN	2.106e-28	52.31	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q84Z89_ORYSJ	1.365e-27	51.28	30S ribosomal protein S16-like OS=Oryza sativa sub...	[more]
A2YX32_ORYSI	1.365e-27	51.28	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of Cicer_arietinum_v1_Contig24 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G34620.1	7.857e-29	68.29	\| Symbols: SSR16 \| small subunit ribosomal protein...	[more]
AT5G56940.1	1.340e-28	50.00	\| Symbols: \| Ribosomal protein S16 family protein...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000307	Ribosomal protein S16	GENE3D	3.30.1320.10	no description	coord: 34..113 score: 1.3
IPR000307	Ribosomal protein S16	HAMAP	MF_00385	Ribosomal_S16	coord: 33..111 score: 22
IPR000307	Ribosomal protein S16	PANTHER	PTHR12919	30S RIBOSOMAL PROTEIN S16	coord: 33..113 score: 1
IPR000307	Ribosomal protein S16	PFAM	PF00886	Ribosomal_S16	coord: 40..101 score: 5.6
IPR000307	Ribosomal protein S16	TIGRFAMs	TIGR00002	S16: ribosomal protein S16	coord: 34..114 score: 7.9
IPR000307	Ribosomal protein S16	SUPERFAMILY	54565	Ribosomal protein S16	coord: 33..117 score: 5
None	No IPR available	PANTHER	PTHR12919:SF5	MITOCHONDRIAL RIBOSOMAL PROTEIN S16	coord: 33..113 score: 1
None	No IPR available	SEG	seg	seg	coord: 1..9 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig24 ID=Cicer_arietinum_v1_Contig24; Name=Cicer_arietinum_v1_Contig24; organism=Cicer arietinum; type=contig; length=709bp
AGACAGCAATGTCAGGNATGCATACNTGACAGGNAGAGGAATAAAGCAAT
AATCAAATAAGCTACNTCCAAATATTGTACTGACATCTTCCAAGTAAGTT
TCANAANAAAAAACAGTTGATGTTTCAACAGCAAGATGACATATCAATTT
AACAGAGTACAAACTTTGATCAAAGTGTTTGCCATTGCATTGAATGACAC
TCACAACACAACCCACCTTCTCCAAACATATGGCTGTTATTCTCTTCAGT
TAACTTGTAAGCCGATAGACAATACAGCTTCTGGAGATATACCATCAACT
TCTTTGTCATTGGCATTGGCTGGCTGGTCAGGGTAGTTATCAAACGCTCC
GCCTTTACGTTTCACTGGTAAACCTGCTCGAAATAAAAGAGTCTCCACAG
GTTCTGAAGGTTGAGCACCAACAGAAAGCCAATACTTCACACGTTCCAGT
TTGATACTCACTCTTTTCTCGTCATCTTTAGCTGCAATAGGATTGTAGTA
ACCTAAAACTTCAATGTTCTTGCCATCTCTTGCAGCTTTGCTATCAGTAA
CAACAACCCGATAAAAAGGGTTGTGAGTGCACCCAAGTCTCGCTAATCGA
ATACTCACCACCATCTTTTCACCTGGTTGGCTCCGAAGATAGTATTTCTC
TCTTTCAACCTTAGCGGGTACCGTTCCCCCNGCGTACCTGGCCCGGGCGG
CCGCTCGAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000307	Ribosomal_bS16

Search form

Cicer_arietinum_v1_Contig24