Cicer_arietinum_v1_Contig254

Contig Overview
NameCicer_arietinum_v1_Contig254
Unique NameCicer_arietinum_v1_Contig254
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length561
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
HO064588ESTHO064588:1..562 +Cicer arietinum unigene v1n/a
HO062175ESTHO062175:73..562 +Cicer arietinum unigene v1n/a
HO064098ESTHO064098:163..562 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO064588HO064588Cicer arietinumEST
HO062175HO062175Cicer arietinumEST
HO064098HO064098Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TrEMBL
Match: D7SXN9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_91.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037817001 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.990e-15
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 3 
Query:   42 TVSGVSEVLNGVIKEAKLLRTALGSSLPISWSVETEVGYFEDGEGRDTV----HKECSAEKIDTVSAAGLEMVELLIFAAQMLGD 284
            TVS V E L+ +I EAKL++TALGSSLP+SWS E +   F  GE  D      H + S+EKID+V AAG EMVELLIFA Q+L D
Sbjct:  569 TVSSVLEALDDIINEAKLVKTALGSSLPVSWSAEADGESF--GESMDNAPGCFHGDSSSEKIDSVCAAGFEMVELLIFAVQVLKD 651
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TrEMBL
Match: A5B598_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013873 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.990e-15
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 3 
Query:   42 TVSGVSEVLNGVIKEAKLLRTALGSSLPISWSVETEVGYFEDGEGRDTV----HKECSAEKIDTVSAAGLEMVELLIFAAQMLGD 284
            TVS V E L+ +I EAKL++TALGSSLP+SWS E +   F  GE  D      H + S+EKID+V AAG EMVELLIFA Q+L D
Sbjct:  551 TVSSVLEALDDIINEAKLVKTALGSSLPVSWSAEADGESF--GESMDNAPGCFHGDSSSEKIDSVCAAGFEMVELLIFAVQVLKD 633
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TrEMBL
Match: B9T2F7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0834990 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.420e-13
Identity = 46/82 (56.10%), Postives = 57/82 (69.51%), Query Frame = 3 
Query:   42 TVSGVSEVLNGVIKEAKLLRTALGSSLPISWS---VETEVGYFEDGEGRDTVHKECSAEKIDTVSAAGLEMVELLIFAAQML 278
            T  GV E L+ ++ EAKLL+TA GSSLPISWS   V+T  G     E  D + ++ S EK+D+VSAAG EMVELLI AAQ+L
Sbjct:  565 TCVGVLEALHDIVSEAKLLKTAFGSSLPISWSAEAVDTSTGGSTHNEPGD-LDEDSSYEKMDSVSAAGFEMVELLILAAQIL 645
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TrEMBL
Match: B9HN07_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_557525 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.420e-13
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 3 
Query:   42 TVSGVSEVLNGVIKEAKLLRTALGSSLPISWSVETE---VGYFEDGEGRDTVHKECSAEKIDTVSAAGLEMVELLIFAAQMLGDMLT 293
            TVSG+   L+ +I EA+L++TALGSSLPISWS E +   +G     +  D ++ E S+EKID VSAAG EMVELLI A Q+L D  T
Sbjct:  168 TVSGLPVALDDIIYEARLVKTALGSSLPISWSAEADDASIGESFHNKLTD-IYGEHSSEKIDPVSAAGFEMVELLILAGQILKDNKT 253
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TrEMBL
Match: B9GIA6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_550017 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.246e-13
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 3 
Query:   42 TVSGVSEVLNGVIKEAKLLRTALGSSLPISWSVETEVGYFEDG--EGRDTVHKECSAEKIDTVSAAGLEMVELLIFAAQMLGD 284
            T +G+ E LN +I EA+L++TALGSSLP+SWS E +     +   +    ++     EKID+VSAAG EMVELLI AAQ+L D
Sbjct:   41 TSTGLLEALNDIISEARLVKTALGSSLPVSWSAEADDASIGESVCDELSDIYGNPIGEKIDSVSAAGFEMVELLILAAQILKD 123
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TrEMBL
Match: Q9ZVK7_ARATH (Putative uncharacterized protein At2g14680 OS=Arabidopsis thaliana GN=At2g14680 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.804e-8
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 3 
Query:   42 TVSGVSEVLNGVIKEAKLLRTALGSSLPISWSVETEVGYFEDGEGRDTVHKECSAEKIDTVSAAGLEMVELLIFAAQML 278
            T       +  ++ EA  L+TALG S+PISWS E+++    DGE         S E+ D+VSAAG EMVEL+I AA+++
Sbjct:  554 TARSCEVAIANILVEATHLKTALGISIPISWSAESDIESVTDGES--------SCERTDSVSAAGFEMVELVILAAEIM 624
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TrEMBL
Match: Q8GWH9_ARATH (Putative uncharacterized protein At2g14680 OS=Arabidopsis thaliana GN=At2g14680 PE=2 SV=2)

HSP 1 Score: 62.7734 bits (151), Expect = 1.804e-8
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 3 
Query:   42 TVSGVSEVLNGVIKEAKLLRTALGSSLPISWSVETEVGYFEDGEGRDTVHKECSAEKIDTVSAAGLEMVELLIFAAQML 278
            T       +  ++ EA  L+TALG S+PISWS E+++    DGE         S E+ D+VSAAG EMVEL+I AA+++
Sbjct:  416 TARSCEVAIANILVEATHLKTALGISIPISWSAESDIESVTDGES--------SCERTDSVSAAGFEMVELVILAAEIM 486
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TrEMBL
Match: D7L2P0_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_674135 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 2.357e-8
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 3 
Query:   42 TVSGVSEVLNGVIKEAKLLRTALGSSLPISWSVETEVGYFEDGEGRDTVHKECSAEKIDTVSAAGLEMVELLIFAAQML 278
            T       +  ++ EA  L+TALG S+PISWS E+++    DGE         S E+ D+VSAAG EMVEL+I AA+++
Sbjct:  554 TARSCEVAIANILVEATHLKTALGISIPISWSAESDMESVSDGES--------SCERTDSVSAAGFEMVELVILAAEIM 624
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TrEMBL
Match: Q75KQ9_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBa0036E17.12 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.170e-7
Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 3 
Query:   60 EVLNGVIKEAKLLRTALGSSLPISWSVETEVGYFEDGEGRDTVH------KECSAEKIDTVSAAGLEMVELLIFAAQMLGD 284
            E LN +I EA L++TALG +LP+SW     +G   D    D ++      K   +EK D +S+AG+EMVELLI AA +L D
Sbjct:  595 EALNSLITEANLMKTALGVALPVSW-----LGDSSDAITSDALYDPSESPKSSKSEKQDPLSSAGMEMVELLILAADILKD 670
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TrEMBL
Match: C7J0D6_ORYSJ (Os03g0431932 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0431932 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.170e-7
Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 3 
Query:   60 EVLNGVIKEAKLLRTALGSSLPISWSVETEVGYFEDGEGRDTVH------KECSAEKIDTVSAAGLEMVELLIFAAQMLGD 284
            E LN +I EA L++TALG +LP+SW     +G   D    D ++      K   +EK D +S+AG+EMVELLI AA +L D
Sbjct:  196 EALNSLITEANLMKTALGVALPVSW-----LGDSSDAITSDALYDPSESPKSSKSEKQDPLSSAGMEMVELLILAADILKD 271
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TAIR peptide
Match: AT2G14680.3 (| Symbols: MEE13 | myosin heavy chain-related | chr2:6278256-6283766 FORWARD LENGTH=629)

HSP 1 Score: 62.7734 bits (151), Expect = 1.447e-10
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 3 
Query:   42 TVSGVSEVLNGVIKEAKLLRTALGSSLPISWSVETEVGYFEDGEGRDTVHKECSAEKIDTVSAAGLEMVELLIFAAQML 278
            T       +  ++ EA  L+TALG S+PISWS E+++    DGE         S E+ D+VSAAG EMVEL+I AA+++
Sbjct:  554 TARSCEVAIANILVEATHLKTALGISIPISWSAESDIESVTDGES--------SCERTDSVSAAGFEMVELVILAAEIM 624
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TAIR peptide
Match: AT2G14680.2 (| Symbols: MEE13 | myosin heavy chain-related | chr2:6278256-6283766 FORWARD LENGTH=652)

HSP 1 Score: 62.7734 bits (151), Expect = 1.447e-10
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 3 
Query:   42 TVSGVSEVLNGVIKEAKLLRTALGSSLPISWSVETEVGYFEDGEGRDTVHKECSAEKIDTVSAAGLEMVELLIFAAQML 278
            T       +  ++ EA  L+TALG S+PISWS E+++    DGE         S E+ D+VSAAG EMVEL+I AA+++
Sbjct:  577 TARSCEVAIANILVEATHLKTALGISIPISWSAESDIESVTDGES--------SCERTDSVSAAGFEMVELVILAAEIM 647
[Close]
BLAST of Cicer_arietinum_v1_Contig254 vs. TAIR peptide
Match: AT2G14680.1 (| Symbols: MEE13 | myosin heavy chain-related | chr2:6278256-6283766 FORWARD LENGTH=629)

HSP 1 Score: 62.7734 bits (151), Expect = 1.447e-10
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 3 
Query:   42 TVSGVSEVLNGVIKEAKLLRTALGSSLPISWSVETEVGYFEDGEGRDTVHKECSAEKIDTVSAAGLEMVELLIFAAQML 278
            T       +  ++ EA  L+TALG S+PISWS E+++    DGE         S E+ D+VSAAG EMVEL+I AA+++
Sbjct:  554 TARSCEVAIANILVEATHLKTALGISIPISWSAESDIESVTDGES--------SCERTDSVSAAGFEMVELVILAAEIM 624
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig254 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7SXN9_VITVI1.990e-1557.65Whole genome shotgun sequence of line PN40024, sca... [more]
A5B598_VITVI1.990e-1557.65Putative uncharacterized protein OS=Vitis vinifera... [more]
B9T2F7_RICCO5.420e-1356.10Putative uncharacterized protein OS=Ricinus commun... [more]
B9HN07_POPTR5.420e-1354.02Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GIA6_POPTR9.246e-1350.60Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q9ZVK7_ARATH1.804e-843.04Putative uncharacterized protein At2g14680 OS=Arab... [more]
Q8GWH9_ARATH1.804e-843.04Putative uncharacterized protein At2g14680 OS=Arab... [more]
D7L2P0_ARALY2.357e-843.04Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
Q75KQ9_ORYSJ1.170e-744.44Expressed protein OS=Oryza sativa subsp. japonica ... [more]
C7J0D6_ORYSJ1.170e-744.44Os03g0431932 protein (Fragment) OS=Oryza sativa su... [more]
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BLAST of Cicer_arietinum_v1_Contig254 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G14680.31.447e-1043.04| Symbols: MEE13 | myosin heavy chain-related | ch... [more]
AT2G14680.21.447e-1043.04| Symbols: MEE13 | myosin heavy chain-related | ch... [more]
AT2G14680.11.447e-1043.04| Symbols: MEE13 | myosin heavy chain-related | ch... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..13
score
NoneNo IPR availableSEGsegsegcoord: 39..51
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig254 ID=Cicer_arietinum_v1_Contig254; Name=Cicer_arietinum_v1_Contig254; organism=Cicer arietinum; type=contig; length=561bp
CGGCCGCGGGAATTCGATTTCGAGCGGCCGCCCGGGCAGGTACAGTTTCT
GGTGTTTCAGAAGTCCTTAATGGTGTTATCAAGGAGGCAAAACTTTTAAG
GACTGCTCTTGGCAGCTCCTTACCAATTAGTTGGTCAGTTGAGACAGAAG
TGGGTTACTTTGAAGATGGTGAGGGTAGAGACACAGTCCATAAAGAATGC
AGTGCTGAAAAGATAGACACTGTTTCTGCTGCAGGACTCGAAATGGTGGA
GCTTTTGATTTTTGCCGCACAGATGTTGGGGGACATGTTAACTGCTATGA
TTCCTGATATAGAAGTTATATGAAGAGCTGTTCCTTGTATGATATTGTGG
TTACTGGTGTGGTTCCCTTTAATGGCTTGTTTGATGCCTTGTATTTACGG
ATGTTCTTTTAAGGCCTGCTACCCCCCACCAATCACGCAGGGTGATTATG
TAAAAAATTCAGAGAGAGGGAGATATAGCTTTAACGAGTTTGTCCAGGGA
AGAAAACTGAAAATGTGCCATACAATCATATTCATATATGTGCATGATAT
TGTAAATTTAT
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