Cicer_arietinum_v1_Contig2547

Contig Overview
NameCicer_arietinum_v1_Contig2547
Unique NameCicer_arietinum_v1_Contig2547
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length751
Alignments
The following features are aligned
Feature Name Type LocationAnalysis
GR409701ESTGR409701:47..582 +Cicer arietinum unigene v1
GR394203ESTGR394203:1..635 +Cicer arietinum unigene v1
GR409887ESTGR409887:47..608 +Cicer arietinum unigene v1
GR409303ESTGR409303:47..644 +Cicer arietinum unigene v1
HO067954ESTHO067954:54..657 +Cicer arietinum unigene v1
GR399393ESTGR399393:21..644 -Cicer arietinum unigene v1
GR399589ESTGR399589:19..719 -Cicer arietinum unigene v1
GR399890ESTGR399890:21..751 +Cicer arietinum unigene v1
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR409701GR409701Cicer arietinumEST
GR394203GR394203Cicer arietinumEST
GR409887GR409887Cicer arietinumEST
GR409303GR409303Cicer arietinumEST
HO067954HO067954Cicer arietinumEST
GR399393GR399393Cicer arietinumEST
GR399589GR399589Cicer arietinumEST
GR399890GR399890Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig2547 vs. TrEMBL
Match: C6TFM0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 9.209e-37
Identity = 78/107 (72.90%), Postives = 91/107 (85.05%), Query Frame = 1
Query:    7 STQSMVQLTDNQFMDEEVDIDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSEPEFPADSASLKQKNVTAEAGSSSEHL 327
            S+Q++ +L+DNQ +DEEVD+DLEYLRM FPGIS QSLVDVYNVNSGDLDAAIDMLSQLE  +G ++SG LP+TLDIGDVSE   PADSASLKQKNV  E  +SS H+
Sbjct:   85 SSQNVAELSDNQLLDEEVDMDLEYLRMNFPGISYQSLVDVYNVNSGDLDAAIDMLSQLEL-EGDETSGILPETLDIGDVSESGLPADSASLKQKNVAEETNTSSSHM 190          

HSP 2 Score: 26.5646 bits (57), Expect = 9.209e-37
Identity = 8/15 (53.33%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  342 SVNCETICYSQLVWL 386
            +++CE +C+SQL WL
Sbjct:  193 AMSCELVCHSQLFWL 207          
BLAST of Cicer_arietinum_v1_Contig2547 vs. TrEMBL
Match: B7FGX8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.647e-35
Identity = 73/90 (81.11%), Postives = 84/90 (93.33%), Query Frame = 1
Query:    7 STQSMVQLTDNQFMDEEVDIDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSEPEFPADSAS 276
            S QS+ QLT+NQ+MDEE+DIDLEYLRMTFPGISD+SLVDVYNVNSGDL+AAI+MLSQLEFDD VD+ G+LP++LDIGDVSEP  PADSAS
Sbjct:   78 SPQSVAQLTENQYMDEELDIDLEYLRMTFPGISDESLVDVYNVNSGDLEAAIEMLSQLEFDDAVDAHGSLPESLDIGDVSEPVMPADSAS 167          
BLAST of Cicer_arietinum_v1_Contig2547 vs. TrEMBL
Match: C6T3T0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 8.455e-34
Identity = 76/107 (71.03%), Postives = 89/107 (83.18%), Query Frame = 1
Query:    7 STQSMVQLTDNQFMDEEVDIDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSEPEFPADSASLKQKNVTAEAGSSSEHL 327
            S+Q++ +LTDNQ +DEE+D+DLEYLRM FPGIS QSLVDVYNVNSGDLD AIDMLSQLE  +G ++SG+LP+TLDIGDVSE   PADS SLKQKNV  E  +SS  L
Sbjct:   87 SSQNVAELTDNQLVDEELDMDLEYLRMNFPGISYQSLVDVYNVNSGDLDVAIDMLSQLEL-EGDETSGSLPETLDIGDVSESGLPADSVSLKQKNVAEETSTSSGQL 192          
BLAST of Cicer_arietinum_v1_Contig2547 vs. TrEMBL
Match: B9H9F6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819567 PE=4 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.307e-26
Identity = 63/104 (60.58%), Postives = 81/104 (77.88%), Query Frame = 1
Query:    7 STQSMVQLTDNQFMDEEVDIDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSEPEFPADSASLKQKNVTAEAGSSS 318
            S+Q+  ++T  Q +DEE ++DLEYLR+ FPGISD+SL  VY  N GD+DAAIDML+QLEFD  ++SSGNLPDTLDIGDV EP   A+++S+K K V  EA +SS
Sbjct:   81 SSQNSYEMTGKQNVDEEFEMDLEYLRINFPGISDESLTGVYMANKGDIDAAIDMLNQLEFDT-LESSGNLPDTLDIGDVYEPRPSAEASSVKPKTVVDEASASS 183          
BLAST of Cicer_arietinum_v1_Contig2547 vs. TrEMBL
Match: B9RS89_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0804420 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.074e-20
Identity = 58/104 (55.77%), Postives = 75/104 (72.12%), Query Frame = 1
Query:    7 STQSMVQLTDNQFMDEEVDIDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSEPEFPADSASLKQKNVTAEAGSSS 318
            S+Q+   LT+ Q ++E+ DI LE+L+ +FPG+SD+SL DVY  N  DL+A IDML+ LEFD   + S NLPDTLDIGDVSE    A+ AS+K KNV  EA +SS
Sbjct:   81 SSQNPDDLTEKQTVNEDYDI-LEFLQASFPGVSDESLNDVYKANKCDLEATIDMLNHLEFDT-FEYSENLPDTLDIGDVSELGSLAECASVKLKNVAGEASASS 182          
BLAST of Cicer_arietinum_v1_Contig2547 vs. TrEMBL
Match: D7TBT3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015440001 PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.958e-14
Identity = 48/86 (55.81%), Postives = 62/86 (72.09%), Query Frame = 1
Query:   64 IDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSEPEFPADSASLKQKNVTAEA-GSSS 318
            +DL YL   FPGISDQSL+DVY  N GDL+A+IDML+QLEF   VD+  +LP++LDIGDVS+ +  A+ +S  +     EA GSSS
Sbjct:    1 MDLAYLGTLFPGISDQSLLDVYTANGGDLEASIDMLNQLEFYP-VDARRHLPESLDIGDVSDVKSSAEGSSKLKGICPGEACGSSS 85          
BLAST of Cicer_arietinum_v1_Contig2547 vs. TrEMBL
Match: Q6NQH9_ARATH (AT5G25540 protein OS=Arabidopsis thaliana GN=AT5G25540 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.658e-13
Identity = 49/97 (50.52%), Postives = 66/97 (68.04%), Query Frame = 1
Query:   34 DNQFMDE--EVDIDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSEPEFPADSASLKQKNVTAEAGSSS 318
            ++Q  DE  E+D+D+EYL  T+PG+S +S+ DVY  N+ DLDA I+ML+QLE     ++   LPDTLDIGDV  PE   +S+  KQKN  + A SSS
Sbjct:   74 NHQLKDEDLEMDMDIEYLLATYPGLSQESINDVYLANTCDLDATIEMLNQLEI-YSTEAEEYLPDTLDIGDV--PEIITESS--KQKNDGSSASSSS 165          
BLAST of Cicer_arietinum_v1_Contig2547 vs. TrEMBL
Match: Q9LYE5_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=F15N18_30 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.299e-13
Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 1
Query:   34 DNQFMDEEVDIDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSE 249
            D+  ++ ++D+D+EYL +TF G+S +S+ DVY  N GDL+A I+ML+QLE     +S  NLP+TLDIGD+SE
Sbjct:   59 DDLDLEMDIDMDIEYLLVTFSGLSQESITDVYLANGGDLEATIEMLNQLEI-YSTESEENLPETLDIGDISE 129          
BLAST of Cicer_arietinum_v1_Contig2547 vs. TrEMBL
Match: D7M3Q7_ARALY (CID5/IPD1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487980 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.299e-13
Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 1
Query:   34 DNQFMDEEVDIDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSE 249
            D+  ++ ++D+D+EYL +TF G+S +S+ DVY  N GDL+A I+ML+QLE     +S  NLP+TLDIGD+SE
Sbjct:   69 DDLDLEMDIDMDIEYLLVTFSGLSQESITDVYLANGGDLEATIEMLNQLEI-YSTESEENLPETLDIGDISE 139          
BLAST of Cicer_arietinum_v1_Contig2547 vs. TrEMBL
Match: D7M403_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_910614 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.074e-12
Identity = 48/98 (48.98%), Postives = 63/98 (64.29%), Query Frame = 1
Query:   34 DNQFMDE--EVDIDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSEP-EFPADSASLKQKNVTAEAGSSS 318
            ++Q  DE  E+D+D+EYL +TF G+S +S+ DVY  NS DLDA I+ML+QLE     ++   LPDTLDIGDV E    P+ S   K KN    + SSS
Sbjct:   74 NHQLKDEDLEMDMDIEYLLVTFAGLSHESINDVYLANSCDLDATIEMLNQLEI-YSTEAQEYLPDTLDIGDVPETITEPSTSTVSKPKNEANASSSSS 170          
BLAST of Cicer_arietinum_v1_Contig2547 vs. TAIR peptide
Match: AT5G25540.1 (| Symbols: CID6 | CTC-interacting domain 6 | chr5:8891770-8892362 REVERSE LENGTH=175)

HSP 1 Score: 80.4925 bits (197), Expect = 1.094e-15
Identity = 49/97 (50.52%), Postives = 66/97 (68.04%), Query Frame = 1
Query:   34 DNQFMDE--EVDIDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSEPEFPADSASLKQKNVTAEAGSSS 318
            ++Q  DE  E+D+D+EYL  T+PG+S +S+ DVY  N+ DLDA I+ML+QLE     ++   LPDTLDIGDV  PE   +S+  KQKN  + A SSS
Sbjct:   74 NHQLKDEDLEMDMDIEYLLATYPGLSQESINDVYLANTCDLDATIEMLNQLEI-YSTEAEEYLPDTLDIGDV--PEIITESS--KQKNDGSSASSSS 165          
BLAST of Cicer_arietinum_v1_Contig2547 vs. TAIR peptide
Match: AT5G11440.1 (| Symbols: CID5, IPD1 | CTC-interacting domain 5 | chr5:3653060-3653607 REVERSE LENGTH=155)

HSP 1 Score: 78.5666 bits (192), Expect = 4.156e-15
Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 1
Query:   34 DNQFMDEEVDIDLEYLRMTFPGISDQSLVDVYNVNSGDLDAAIDMLSQLEFDDGVDSSGNLPDTLDIGDVSE 249
            D+  ++ ++D+D+EYL +TF G+S +S+ DVY  N GDL+A I+ML+QLE     +S  NLP+TLDIGD+SE
Sbjct:   59 DDLDLEMDIDMDIEYLLVTFSGLSQESITDVYLANGGDLEATIEMLNQLEI-YSTESEENLPETLDIGDISE 129          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2547 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TFM0_SOYBN9.209e-3772.90Putative uncharacterized protein OS=Glycine max PE... [more]
B7FGX8_MEDTR7.647e-3581.11Putative uncharacterized protein OS=Medicago trunc... [more]
C6T3T0_SOYBN8.455e-3471.03Putative uncharacterized protein OS=Glycine max PE... [more]
B9H9F6_POPTR1.307e-2660.58Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RS89_RICCO4.074e-2055.77Putative uncharacterized protein OS=Ricinus commun... [more]
D7TBT3_VITVI1.958e-1455.81Whole genome shotgun sequence of line PN40024, sca... [more]
Q6NQH9_ARATH1.658e-1350.52AT5G25540 protein OS=Arabidopsis thaliana GN=AT5G2... [more]
Q9LYE5_ARATH6.299e-1351.39Putative uncharacterized protein OS=Arabidopsis th... [more]
D7M3Q7_ARALY6.299e-1351.39CID5/IPD1 OS=Arabidopsis lyrata subsp. lyrata GN=A... [more]
D7M403_ARALY1.074e-1248.98Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of Cicer_arietinum_v1_Contig2547 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G25540.11.094e-1550.52| Symbols: CID6 | CTC-interacting domain 6 | chr5:... [more]
AT5G11440.14.156e-1551.39| Symbols: CID5, IPD1 | CTC-interacting domain 5 |... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 10..25
score
NoneNo IPR availableSEGsegsegcoord: 57..75
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2547 ID=Cicer_arietinum_v1_Contig2547; Name=Cicer_arietinum_v1_Contig2547; organism=Cicer arietinum; type=contig; length=751bp
GTGGTATCAACGCAGAGTATGGTACAGCTGACAGATAATCAGTTTATGGA
TGAAGAGGTTGATATAGATTTGGAATATCTTAGGATGACATTTCCTGGTA
TATCTGATCAGTCCCTTGTTGATGTCTACAATGTTAACAGTGGTGACCTT
GATGCTGCTATTGATATGCTTAGCCAACTTGAGTTTGATGATGGTGTTGA
CTCTTCCGGAAATCTTCCAGATACACTGGATATTGGTGATGTTTCAGAAC
CTGAATTTCCAGCTGATTCCGCTTCATTAAAACAGAAGAATGTAACAGCC
GAAGCCGGTTCTTCATCTGAGCACTTGTGAATTGATTTCCAAGTGTGAAT
TGTGAAACGATTTGCTACTCACAATTGGTTTGGTTGGGATATAAATAGTG
TAAAACTAGGGAAAATTTGCTTTAGGTGGAGACGTTCATTACACATGCGT
CGATTTATAGACTGTATAGTCCTTAGCTGCGTCTTGTTTTGCTTAATATG
GTCTGAAATGTTCTCTTTTTGATGTGTTGCTTGTGCCTCTCACAAATTGT
GCAGCTTTCAATTGTATGAATTTGAAGGCCAGTGAAAACAAAATTGGCCA
AAGAGTTAGAAGGAAAATACACATATAAGTGAAGGTGATTTTTCACTTGG
GAATTGTACCTTGGTGAGCAACTTTGGGGCTTACATTACAACAGATATAA
TACATTAGTTTTATTTGCCNGAAAAAAAANNNGAAAAAAAAANNAAAAAA
A
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