Cicer_arietinum_v1_Contig2571

Contig Overview


Name	Cicer_arietinum_v1_Contig2571
Unique Name	Cicer_arietinum_v1_Contig2571
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	427

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
HO063396	EST	HO063396:22..141 +
GR393778	EST	GR393778:1..344 +
HO067029	EST	HO067029:134..395 -
HO664247	EST	HO664247:20..427 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
HO063396	HO063396	Cicer arietinum	EST
GR393778	GR393778	Cicer arietinum	EST
HO067029	HO067029	Cicer arietinum	EST
HO664247	HO664247	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
Match: RL362_ARATH (60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.688e-42
Identity = 85/101 (84.16%), Postives = 91/101 (90.10%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            M   Q  TGLFVGLNKGHVVT++ELAPRP  RKGKTSKR  F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR
Sbjct:    1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
Match: RL361_ARATH (60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.528e-41
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 1

Query:   40 TGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            TGLFVGLNKGHVVT++ELAPRP+ RKGKTSKR  F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR
Sbjct:    8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
Match: RL363_ARATH (60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.255e-40
Identity = 82/95 (86.32%), Postives = 90/95 (94.74%), Query Frame = 1

Query:   37 STGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            +TGLFVGLNKGHVVTK+E  PRP++RKGKTSKR  F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR
Sbjct:    3 ATGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 97

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
Match: RL36_DAUCA (60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 2.892e-37
Identity = 76/91 (83.52%), Postives = 82/91 (90.11%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE 291
            MAPKQP+TGLFVGLNKGH+VTKKELAPRPSDRKGKTSKR HFVRNLIREVAGF PYEKRITELLKVGKDKRALKV + K+G H +  K+ E
Sbjct:    1 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALKVRQEKVG-HSQESKEEE 90

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
Match: RL36_ENTCP (60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.622e-30
Identity = 66/90 (73.33%), Postives = 75/90 (83.33%), Query Frame = 1

Query:   52 VGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            VGLNKGH VTKK   PRPS RKG  S+RV  VR ++REVAG+APYE+R+ ELLKVGKDKRALK+ KRKLGTH R KKKREEM+ VLRKM+
Sbjct:    6 VGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKRALKMCKRKLGTHMRGKKKREEMAGVLRKMQ 95

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
Match: RL36_IXOSC (60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.078e-27
Identity = 61/92 (66.30%), Postives = 69/92 (75.00%), Query Frame = 1

Query:   46 LFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            L VGL KGH VTK E  PRPS RKG  SK   FVR+LIREV GFAP+E+R  ELLKV KDKRALK  K++LGTH R K+KR+E+SNVL   R
Sbjct:    7 LAVGLGKGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKDKRALKFIKKRLGTHLRGKRKRDELSNVLVAQR 98

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
Match: RL36_PONAB (60S ribosomal protein L36 OS=Pongo abelii GN=RPL36 PE=3 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 7.895e-27
Identity = 59/90 (65.56%), Postives = 70/90 (77.78%), Query Frame = 1

Query:   52 VGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            VGLNKGH VTK    PR S R+G+ +K   FVR++IREV GFAPYE+R  ELLKV KDKRALK  K+++GTH RAK+KREE+SNVL  MR
Sbjct:    9 VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
Match: RL36_HUMAN (60S ribosomal protein L36 OS=Homo sapiens GN=RPL36 PE=1 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 7.895e-27
Identity = 59/90 (65.56%), Postives = 70/90 (77.78%), Query Frame = 1

Query:   52 VGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            VGLNKGH VTK    PR S R+G+ +K   FVR++IREV GFAPYE+R  ELLKV KDKRALK  K+++GTH RAK+KREE+SNVL  MR
Sbjct:    9 VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
Match: RL36_BOVIN (60S ribosomal protein L36 OS=Bos taurus GN=RPL36 PE=3 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 1.347e-26
Identity = 59/90 (65.56%), Postives = 70/90 (77.78%), Query Frame = 1

Query:   52 VGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            VGLNKGH VTK    PR S R+G+ +K   FVR++IREV GFAPYE+R  ELLKV KDKRALK  K+++GTH RAK+KREE+SNVL  MR
Sbjct:    9 VGLNKGHKVTKNVGKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
Match: RL36_XENTR (60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.297e-26
Identity = 58/90 (64.44%), Postives = 69/90 (76.67%), Query Frame = 1

Query:   52 VGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            VGLNKGH VTK    PR   R+G+ +K   FVR++IREV GFAPYE+R  ELLKV KDKRALK  K+++GTH RAK+KREE+SNVL  MR
Sbjct:    9 VGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREELSNVLAAMR 98

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
Match: D7UC97_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026914001 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.700e-48
Identity = 97/101 (96.04%), Postives = 100/101 (99.01%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            MAPKQP+TGLFVGLNKGHVVTKKEL PRPSDRKGKTSKRVHFVRN+IREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMR
Sbjct:   36 MAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 136

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
Match: A5ATP3_VITVI (60S ribosomal protein L36 OS=Vitis vinifera GN=VITISV_013224 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.700e-48
Identity = 97/101 (96.04%), Postives = 100/101 (99.01%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            MAPKQP+TGLFVGLNKGHVVTKKEL PRPSDRKGKTSKRVHFVRN+IREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMR
Sbjct:    1 MAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
Match: C6TK30_SOYBN (60S ribosomal protein L36 OS=Glycine max PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.220e-48
Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            MAPK PSTGLFVGLNKGHVVTKKEL PRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMR
Sbjct:    1 MAPKPPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
Match: B9I1L9_POPTR (60S ribosomal protein L36 OS=Populus trichocarpa GN=POPTRDRAFT_822944 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.460e-48
Identity = 96/101 (95.05%), Postives = 100/101 (99.01%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            MAPKQP+TGLFVGLNKGH+VTKKELAPRPSDRKGKTSKRV FVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSNVLRKMR
Sbjct:    1 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVQFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
Match: A9PCN6_POPTR (60S ribosomal protein L36 OS=Populus trichocarpa GN=POPTRDRAFT_713845 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.460e-48
Identity = 97/101 (96.04%), Postives = 100/101 (99.01%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            MAPKQP+TGLFVGLNKGH+VTKKELAPRPSDRKGKTSKRV FVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR
Sbjct:    1 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
Match: B5M1W9_RHEAU (60S ribosomal protein L36 OS=Rheum australe PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 8.438e-48
Identity = 96/101 (95.05%), Postives = 99/101 (98.02%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            MAPKQPS+GLFVGLNKGH+VTKKEL  +PSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR
Sbjct:    1 MAPKQPSSGLFVGLNKGHIVTKKELPAKPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
Match: A9P9I5_POPTR (60S ribosomal protein L36 OS=Populus trichocarpa GN=POPTRDRAFT_824937 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.206e-47
Identity = 96/101 (95.05%), Postives = 100/101 (99.01%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            MAPKQP+TGLFVGLNKGHVVTKK+LAPRPSDRKGK+SKRV FVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR
Sbjct:    1 MAPKQPNTGLFVGLNKGHVVTKKDLAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
Match: A9PD00_POPTR (60S ribosomal protein L36 OS=Populus trichocarpa GN=POPTRDRAFT_728614 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 7.143e-47
Identity = 95/101 (94.06%), Postives = 100/101 (99.01%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            MAPKQP+TGLFVGLNKGHVVTKK+LAPRPSDRKGK+SKRV FVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSNVLRKMR
Sbjct:    1 MAPKQPNTGLFVGLNKGHVVTKKDLAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
Match: Q5I7L5_WHEAT (60S ribosomal protein L36 OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 7.897e-46
Identity = 92/101 (91.09%), Postives = 97/101 (96.04%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            MAP QP +GLFVG+NKGHVVTK+EL PRPSDRKGK +KRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMS+VLRKMR
Sbjct:    1 MAPSQPKSGLFVGINKGHVVTKRELPPRPSDRKGKGTKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
Match: Q6L510_ORYSJ (60S ribosomal protein L36 OS=Oryza sativa subsp. japonica GN=OJ1281_H05.4 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.489e-44
Identity = 90/101 (89.11%), Postives = 96/101 (95.05%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            MAP QP +GLFVG+NKGHVVTK+EL PRPSDRKGK++KRV FVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEM+ VLRKMR
Sbjct:    1 MAPSQPKSGLFVGINKGHVVTKRELPPRPSDRKGKSTKRVTFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TAIR peptide
Match: AT3G53740.4 (| Symbols: | Ribosomal protein L36e family protein | chr3:19913921-19914813 REVERSE LENGTH=112)

HSP 1 Score: 168.703 bits (426), Expect = 1.072e-42
Identity = 85/101 (84.16%), Postives = 91/101 (90.10%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            M   Q  TGLFVGLNKGHVVT++ELAPRP  RKGKTSKR  F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR
Sbjct:    1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TAIR peptide
Match: AT3G53740.3 (| Symbols: | Ribosomal protein L36e family protein | chr3:19913921-19914813 REVERSE LENGTH=112)

HSP 1 Score: 168.703 bits (426), Expect = 1.072e-42
Identity = 85/101 (84.16%), Postives = 91/101 (90.10%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            M   Q  TGLFVGLNKGHVVT++ELAPRP  RKGKTSKR  F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR
Sbjct:    1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TAIR peptide
Match: AT3G53740.2 (| Symbols: | Ribosomal protein L36e family protein | chr3:19913921-19914813 REVERSE LENGTH=112)

HSP 1 Score: 168.703 bits (426), Expect = 1.072e-42
Identity = 85/101 (84.16%), Postives = 91/101 (90.10%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            M   Q  TGLFVGLNKGHVVT++ELAPRP  RKGKTSKR  F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR
Sbjct:    1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TAIR peptide
Match: AT2G37600.2 (| Symbols: | Ribosomal protein L36e family protein | chr2:15774410-15775203 REVERSE LENGTH=113)

HSP 1 Score: 167.162 bits (422), Expect = 3.118e-42
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 1

Query:   40 TGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            TGLFVGLNKGHVVT++ELAPRP+ RKGKTSKR  F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR
Sbjct:    8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TAIR peptide
Match: AT2G37600.1 (| Symbols: | Ribosomal protein L36e family protein | chr2:15774410-15775203 REVERSE LENGTH=113)

HSP 1 Score: 167.162 bits (422), Expect = 3.118e-42
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 1

Query:   40 TGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            TGLFVGLNKGHVVT++ELAPRP+ RKGKTSKR  F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR
Sbjct:    8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101

[Close]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TAIR peptide
Match: AT5G02450.1 (| Symbols: | Ribosomal protein L36e family protein | chr5:533501-534394 FORWARD LENGTH=108)

HSP 1 Score: 164.851 bits (416), Expect = 1.547e-41
Identity = 82/95 (86.32%), Postives = 90/95 (94.74%), Query Frame = 1

Query:   37 STGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            +TGLFVGLNKGHVVTK+E  PRP++RKGKTSKR  F+RNLI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMS+VLRKMR
Sbjct:    3 ATGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 97

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BLAST of Cicer_arietinum_v1_Contig2571 vs. TAIR peptide
Match: AT3G53740.1 (| Symbols: | Ribosomal protein L36e family protein | chr3:19913921-19914813 REVERSE LENGTH=103)

HSP 1 Score: 144.05 bits (362), Expect = 2.827e-35
Identity = 76/101 (75.25%), Postives = 82/101 (81.19%), Query Frame = 1

Query:   19 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMR 321
            M   Q  TGLFVGLNKGHVVT++ELAPRP  RKGKTSKR  F+RNLI+EVAG APYEKRITEL         LKVAKRKLGTHKRAK+KREEMS+VLRKMR
Sbjct:    1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITEL---------LKVAKRKLGTHKRAKRKREEMSSVLRKMR 92

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig2571 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig2571 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL362_ARATH	8.688e-42	84.16	60S ribosomal protein L36-2 OS=Arabidopsis thalian...	[more]
RL361_ARATH	2.528e-41	88.30	60S ribosomal protein L36-1 OS=Arabidopsis thalian...	[more]
RL363_ARATH	1.255e-40	86.32	60S ribosomal protein L36-3 OS=Arabidopsis thalian...	[more]
RL36_DAUCA	2.892e-37	83.52	60S ribosomal protein L36 OS=Daucus carota GN=RPL3...	[more]
RL36_ENTCP	2.622e-30	73.33	60S ribosomal protein L36 OS=Enteromorpha compress...	[more]
RL36_IXOSC	2.078e-27	66.30	60S ribosomal protein L36 OS=Ixodes scapularis GN=...	[more]
RL36_PONAB	7.895e-27	65.56	60S ribosomal protein L36 OS=Pongo abelii GN=RPL36...	[more]
RL36_HUMAN	7.895e-27	65.56	60S ribosomal protein L36 OS=Homo sapiens GN=RPL36...	[more]
RL36_BOVIN	1.347e-26	65.56	60S ribosomal protein L36 OS=Bos taurus GN=RPL36 P...	[more]
RL36_XENTR	2.297e-26	64.44	60S ribosomal protein L36 OS=Xenopus tropicalis GN...	[more]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7UC97_VITVI	1.700e-48	96.04	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5ATP3_VITVI	1.700e-48	96.04	60S ribosomal protein L36 OS=Vitis vinifera GN=VIT...	[more]
C6TK30_SOYBN	2.220e-48	97.03	60S ribosomal protein L36 OS=Glycine max PE=3 SV=1	[more]
B9I1L9_POPTR	6.460e-48	95.05	60S ribosomal protein L36 OS=Populus trichocarpa G...	[more]
A9PCN6_POPTR	6.460e-48	96.04	60S ribosomal protein L36 OS=Populus trichocarpa G...	[more]
B5M1W9_RHEAU	8.438e-48	95.05	60S ribosomal protein L36 OS=Rheum australe PE=3 S...	[more]
A9P9I5_POPTR	3.206e-47	95.05	60S ribosomal protein L36 OS=Populus trichocarpa G...	[more]
A9PD00_POPTR	7.143e-47	94.06	60S ribosomal protein L36 OS=Populus trichocarpa G...	[more]
Q5I7L5_WHEAT	7.897e-46	91.09	60S ribosomal protein L36 OS=Triticum aestivum PE=...	[more]
Q6L510_ORYSJ	1.489e-44	89.11	60S ribosomal protein L36 OS=Oryza sativa subsp. j...	[more]

BLAST of Cicer_arietinum_v1_Contig2571 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT3G53740.4	1.072e-42	84.16	\| Symbols: \| Ribosomal protein L36e family protei...	[more]
AT3G53740.3	1.072e-42	84.16	\| Symbols: \| Ribosomal protein L36e family protei...	[more]
AT3G53740.2	1.072e-42	84.16	\| Symbols: \| Ribosomal protein L36e family protei...	[more]
AT2G37600.2	3.118e-42	88.30	\| Symbols: \| Ribosomal protein L36e family protei...	[more]
AT2G37600.1	3.118e-42	88.30	\| Symbols: \| Ribosomal protein L36e family protei...	[more]
AT5G02450.1	1.547e-41	86.32	\| Symbols: \| Ribosomal protein L36e family protei...	[more]
AT3G53740.1	2.827e-35	75.25	\| Symbols: \| Ribosomal protein L36e family protei...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000509	Ribosomal protein L36e	PANTHER	PTHR10114	60S RIBOSOMAL PROTEIN L36E	coord: 11..116 score: 1.5
IPR000509	Ribosomal protein L36e	PFAM	PF01158	Ribosomal_L36e	coord: 12..107 score: 1.5
IPR000509	Ribosomal protein L36e	PROSITE	PS01190	RIBOSOMAL_L36E	coord: 61..71 score
None	No IPR available	SEG	seg	seg	coord: 44..56 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig2571 ID=Cicer_arietinum_v1_Contig2571; Name=Cicer_arietinum_v1_Contig2571; organism=Cicer arietinum; type=contig; length=427bp
GGATGCTACCGCAGTAAAATGGCTCCAAAGCAGCCAAGTACAGGTCTTTT
TGTTGGATTGAACAAAGGTCATGTTGTTACCAAGAAGGAGTTGGCTCCAC
GACCCTCAGATCGTAAAGGGAAAACAAGCAAGAGAGTGCACTTTGTAAGG
AACCTCATCCGTGAGGTTGCTGGCTTTGCACCTTACGAAAAGCGTATAAC
TGAGTTGCTGAAGGTCGGAAAGGATAAGAGGGCACTGAAAGTTGCCAAGA
GAAAGCTTGGAACCCATAAACGCGCAAAGAAGAAGCGTGAGGAGATGTCT
AATGTTCTCCGAAAGATGAGGGCTGGTGGAGCAGGAGACAAGAAGAAATA
AATATGATTTACTTTTGTTATGGTTTTAGATATAAGTCAATGTTTTTTTT
ATGGACGTACCTGCCCGGGCGGCCGCT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000509	Ribosomal_eL36

Search form

Cicer_arietinum_v1_Contig2571