Cicer_arietinum_v1_Contig2582

Contig Overview


Name	Cicer_arietinum_v1_Contig2582
Unique Name	Cicer_arietinum_v1_Contig2582
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	517

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GR915086	EST	GR915086:1..199 +
HO214250	EST	HO214250:118..238 -
GR407902	EST	GR407902:10..352 +
HO664171	EST	HO664171:1..425 +
HO066459	EST	HO066459:57..419 +
GR912281	EST	GR912281:1..381 +
GR912806	EST	GR912806:1..413 +
GR393676	EST	GR393676:1..467 -
GR399355	EST	GR399355:119..517 -

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR915086	GR915086	Cicer arietinum	EST
HO214250	HO214250	Cicer arietinum	EST
GR407902	GR407902	Cicer arietinum	EST
HO664171	HO664171	Cicer arietinum	EST
HO066459	HO066459	Cicer arietinum	EST
GR912281	GR912281	Cicer arietinum	EST
GR912806	GR912806	Cicer arietinum	EST
GR393676	GR393676	Cicer arietinum	EST
GR399355	GR399355	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. SwissProt
Match: SC61B_ARATH (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana GN=At2g45070 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.758e-24
Identity = 59/81 (72.84%), Postives = 63/81 (77.78%), Query Frame = 1

Query:   58 LGGGGPQRGSAAATASMRRRK----TXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR 288
            +G G PQRGSAAATASMRRRK                +MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Sbjct:    2 VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. SwissProt
Match: SC61B_DICDI (Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum GN=sec61b PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 5.225e-7
Identity = 23/39 (58.97%), Postives = 32/39 (82.05%), Query Frame = 1

Query:  157 TMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGK 273
            +M++FY++DA GLK+ P  VL MS+ FIAFV +LH+MGK
Sbjct:   19 SMMKFYSEDAIGLKVGPTAVLFMSLIFIAFVIILHIMGK 57

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
Match: C6T1E8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.758e-28
Identity = 66/82 (80.49%), Postives = 68/82 (82.93%), Query Frame = 1

Query:   52 MALGGGGPQRGSAAATASMRRRKTXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA 297
            MALGG  P RGSAAATASMRRR+T           TMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Sbjct:    1 MALGGTAPPRGSAAATASMRRRRTTGGAASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
Match: D7SLS2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018182001 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.596e-26
Identity = 62/93 (66.67%), Postives = 68/93 (73.12%), Query Frame = 1

Query:   19 ENHSPEFLIQKMALGGGGPQRGSAAATASMRRRKTXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA 297
            +  S +F   KM   G  P RGSAAA AS+RRR+T            MLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVR+EA
Sbjct:   31 DRDSLDFEASKMVQNGAAPPRGSAAAAASLRRRRTTSGATAGGASGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRKEA 123

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
Match: A9PF90_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_740095 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.296e-25
Identity = 61/82 (74.39%), Postives = 66/82 (80.49%), Query Frame = 1

Query:   52 MALGGGGPQRGSAAATASMRRRKTXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA 297
            MA+GG  P RGSAAA ASMRRR+T           TMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHV+GKLY VRR+A
Sbjct:    1 MAVGGTAPPRGSAAAAASMRRRRTTSGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVVGKLYLVRRDA 82

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
Match: D7SLR7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018177001 PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.770e-25
Identity = 60/83 (72.29%), Postives = 64/83 (77.11%), Query Frame = 1

Query:   49 KMALGGGGPQRGSAAATASMRRRKTXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA 297
            KM   G  P RGSAAA AS+RRR+T            MLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVR+EA
Sbjct:   30 KMVQNGAAPPRGSAAAAASLRRRRTTSGGTAGVASGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRKEA 112

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
Match: B9RD56_RICCO (Protein transport protein Sec61 subunit beta, putative OS=Ricinus communis GN=RCOM_1609790 PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.770e-25
Identity = 60/82 (73.17%), Postives = 66/82 (80.49%), Query Frame = 1

Query:   52 MALGGGGPQRGSAAATASMRRRKTXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA 297
            MALGG  P RGSAAATAS+RRR+T           TMLQFYTDD+ GLKISPNVVL+MSIGFIAFVA+LHV+GKLY VRREA
Sbjct:    1 MALGGTAPPRGSAAATASLRRRRTTSGGASGGAAGTMLQFYTDDSSGLKISPNVVLIMSIGFIAFVAILHVVGKLYLVRREA 82

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
Match: Q9M206_ARATH (Transport protein subunit-like OS=Arabidopsis thaliana GN=T8B10_200 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.097e-24
Identity = 61/78 (78.21%), Postives = 64/78 (82.05%), Query Frame = 1

Query:   58 LGGGGPQRGSAAATASMRRRK-TXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR 288
            +GGG PQRGSAAATASMRRRK             TMLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Sbjct:    2 VGGGAPQRGSAAATASMRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 79

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
Match: D7LRR8_ARALY (SEC61 beta OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_907582 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.097e-24
Identity = 61/77 (79.22%), Postives = 64/77 (83.12%), Query Frame = 1

Query:   58 LGGGGPQRGSAAATASMRRRKTXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR 288
            +GGG PQRGSAAATASMRRRK            TMLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Sbjct:    2 VGGGAPQRGSAAATASMRRRKPGGSAGGGAAG-TMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 77

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
Match: A9P911_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644302 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.871e-24
Identity = 62/84 (73.81%), Postives = 66/84 (78.57%), Query Frame = 1

Query:   52 MALGGGGPQRGSAAATASMRRRKTXXXXXXXXXXX--TMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA 297
            MA+GG  P RGSAAA ASMRRR+T             TMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHV+GKLY VRREA
Sbjct:    1 MAVGGTAPPRGSAAAAASMRRRRTVSGGASGGAGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVVGKLYLVRREA 84

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
Match: Q8GY93_ARATH (Putative transport protein subunit OS=Arabidopsis thaliana GN=At3g60540/T8B10_200 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.444e-24
Identity = 60/78 (76.92%), Postives = 64/78 (82.05%), Query Frame = 1

Query:   58 LGGGGPQRGSAAATASMRRRK-TXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR 288
            +GGG PQRGSAAATASMR+RK             TMLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Sbjct:    2 VGGGAPQRGSAAATASMRKRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 79

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
Match: A9P839_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.213e-23
Identity = 61/84 (72.62%), Postives = 65/84 (77.38%), Query Frame = 1

Query:   52 MALGGGGPQRGSAAATASMRRRKTXXXXXXXXXXX--TMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVRREA 297
            MA+GG  P RGSAAA ASMRRR+T             TMLQFYTDDAPGLKISPNVVLVMSI FIAFVA+LHV+GKLY VRREA
Sbjct:    1 MAVGGTAPPRGSAAAAASMRRRRTVSGGASGGAGAAGTMLQFYTDDAPGLKISPNVVLVMSIDFIAFVAILHVVGKLYLVRREA 84

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TAIR peptide
Match: AT3G60540.2 (| Symbols: | Preprotein translocase Sec, Sec61-beta subunit protein | chr3:22375132-22375377 REVERSE LENGTH=81)

HSP 1 Score: 116.316 bits (290), Expect = 9.498e-27
Identity = 61/78 (78.21%), Postives = 64/78 (82.05%), Query Frame = 1

Query:   58 LGGGGPQRGSAAATASMRRRK-TXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR 288
            +GGG PQRGSAAATASMRRRK             TMLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Sbjct:    2 VGGGAPQRGSAAATASMRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 79

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TAIR peptide
Match: AT3G60540.1 (| Symbols: | Preprotein translocase Sec, Sec61-beta subunit protein | chr3:22375132-22375377 REVERSE LENGTH=81)

HSP 1 Score: 116.316 bits (290), Expect = 9.498e-27
Identity = 61/78 (78.21%), Postives = 64/78 (82.05%), Query Frame = 1

Query:   58 LGGGGPQRGSAAATASMRRRK-TXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR 288
            +GGG PQRGSAAATASMRRRK             TMLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Sbjct:    2 VGGGAPQRGSAAATASMRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 79

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TAIR peptide
Match: AT2G45070.4 (| Symbols: SEC61 BETA | Preprotein translocase Sec, Sec61-beta subunit protein | chr2:18587208-18587456 REVERSE LENGTH=82)

HSP 1 Score: 111.309 bits (277), Expect = 3.056e-25
Identity = 59/81 (72.84%), Postives = 63/81 (77.78%), Query Frame = 1

Query:   58 LGGGGPQRGSAAATASMRRRK----TXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR 288
            +G G PQRGSAAATASMRRRK                +MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Sbjct:    2 VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TAIR peptide
Match: AT2G45070.3 (| Symbols: SEC61 BETA | Preprotein translocase Sec, Sec61-beta subunit protein | chr2:18587208-18587456 REVERSE LENGTH=82)

HSP 1 Score: 111.309 bits (277), Expect = 3.056e-25
Identity = 59/81 (72.84%), Postives = 63/81 (77.78%), Query Frame = 1

Query:   58 LGGGGPQRGSAAATASMRRRK----TXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR 288
            +G G PQRGSAAATASMRRRK                +MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Sbjct:    2 VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TAIR peptide
Match: AT2G45070.2 (| Symbols: SEC61 BETA | Preprotein translocase Sec, Sec61-beta subunit protein | chr2:18587208-18587456 REVERSE LENGTH=82)

HSP 1 Score: 111.309 bits (277), Expect = 3.056e-25
Identity = 59/81 (72.84%), Postives = 63/81 (77.78%), Query Frame = 1

Query:   58 LGGGGPQRGSAAATASMRRRK----TXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR 288
            +G G PQRGSAAATASMRRRK                +MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Sbjct:    2 VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TAIR peptide
Match: AT2G45070.1 (| Symbols: SEC61 BETA | Preprotein translocase Sec, Sec61-beta subunit protein | chr2:18587208-18587456 REVERSE LENGTH=82)

HSP 1 Score: 111.309 bits (277), Expect = 3.056e-25
Identity = 59/81 (72.84%), Postives = 63/81 (77.78%), Query Frame = 1

Query:   58 LGGGGPQRGSAAATASMRRRK----TXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR 288
            +G G PQRGSAAATASMRRRK                +MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Sbjct:    2 VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TAIR peptide
Match: AT5G60460.1 (| Symbols: | Preprotein translocase Sec, Sec61-beta subunit protein | chr5:24317590-24317919 REVERSE LENGTH=109)

HSP 1 Score: 78.1814 bits (191), Expect = 2.867e-15
Identity = 43/75 (57.33%), Postives = 48/75 (64.00%), Query Frame = 1

Query:   79 RGSAAATASMRRRK--------TXXXXXXXXXXXTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLY 279
            RGSAAATA MRRR+        +            ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Sbjct:   27 RGSAAATAGMRRRRLGGGGGVSSGGGSGVGSGSSNMLRFYTDDAPGLKISPTVVLIMSLCFIGFVTALHVFGKLY 101

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig2582 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig2582 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig2582 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
SC61B_ARATH	2.758e-24	72.84	Protein transport protein Sec61 subunit beta OS=Ar...	[more]
SC61B_DICDI	5.225e-7	58.97	Protein transport protein Sec61 subunit beta OS=Di...	[more]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6T1E8_SOYBN	4.758e-28	80.49	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7SLS2_VITVI	7.596e-26	66.67	Whole genome shotgun sequence of line PN40024, sca...	[more]
A9PF90_POPTR	1.296e-25	74.39	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7SLR7_VITVI	3.770e-25	72.29	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9RD56_RICCO	3.770e-25	73.17	Protein transport protein Sec61 subunit beta, puta...	[more]
Q9M206_ARATH	1.097e-24	78.21	Transport protein subunit-like OS=Arabidopsis thal...	[more]
D7LRR8_ARALY	1.097e-24	79.22	SEC61 beta OS=Arabidopsis lyrata subsp. lyrata GN=...	[more]
A9P911_POPTR	1.871e-24	73.81	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q8GY93_ARATH	2.444e-24	76.92	Putative transport protein subunit OS=Arabidopsis ...	[more]
A9P839_POPTR	1.213e-23	72.62	Putative uncharacterized protein OS=Populus tricho...	[more]

BLAST of Cicer_arietinum_v1_Contig2582 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT3G60540.2	9.498e-27	78.21	\| Symbols: \| Preprotein translocase Sec, Sec61-be...	[more]
AT3G60540.1	9.498e-27	78.21	\| Symbols: \| Preprotein translocase Sec, Sec61-be...	[more]
AT2G45070.4	3.056e-25	72.84	\| Symbols: SEC61 BETA \| Preprotein translocase Sec...	[more]
AT2G45070.3	3.056e-25	72.84	\| Symbols: SEC61 BETA \| Preprotein translocase Sec...	[more]
AT2G45070.2	3.056e-25	72.84	\| Symbols: SEC61 BETA \| Preprotein translocase Sec...	[more]
AT2G45070.1	3.056e-25	72.84	\| Symbols: SEC61 BETA \| Preprotein translocase Sec...	[more]
AT5G60460.1	2.867e-15	57.33	\| Symbols: \| Preprotein translocase Sec, Sec61-be...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005609	Preprotein translocase Sec, Sec61-beta subunit	PFAM	PF03911	Sec61_beta	coord: 51..90 score: 3.2
IPR016482	Preprotein translocase Sec, Sec61-beta subunit, eukarya	PIR	PIRSF006398	Preprotein translocase Sec, Sec61-beta subunit	coord: 18..97 score: 3.5
None	No IPR available	PANTHER	PTHR13509	SEC61BETA-PROV PROTEIN	coord: 4..98 score: 8.5
None	No IPR available	SEG	seg	seg	coord: 42..52 score
None	No IPR available	SEG	seg	seg	coord: 75..88 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig2582 ID=Cicer_arietinum_v1_Contig2582; Name=Cicer_arietinum_v1_Contig2582; organism=Cicer arietinum; type=contig; length=517bp
GAGATTACCGTACCCGACGAAAATCATTCACCGGAATTCCTCATTCAGAA
AATGGCTTTAGGTGGAGGAGGTCCCCAAAGAGGAAGTGCAGCAGCTACCG
CAAGCATGAGGAGAAGGAAAACAGCAGGTGGTGGGGCATCTGGCGGAGCA
GCTGGAACTATGCTTCAATTTTACACTGATGATGCCCCTGGACTCAAAAT
CTCCCCTAATGTGGTTCTTGTAATGAGCATTGGCTTTATTGCTTTTGTTG
CTGTCCTTCATGTGATGGGAAAGCTTTATTTTGTTCGCAGGGAGGCTTAA
GGGATATAAGTCAAGAAGTTGGGTTTATAACACTTACTCTGTTAATGAAC
TTAGATTTCTGTTGCTAGACCCACATAACCCCTTGTGATGTTATATTTCT
TTTTGTTCTTTTGGTACAATCTGTTATTATTTTTATGTTTAACAAGTGAT
AGATGTTAGCTTTTTTATATATTGTTCCTAGAAGTATTATAAGATAACAC
ATAACTGTTACTTCTCT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR005609	Preprotein translocase Sec, Sec61-beta subunit
IPR016482	SecG/Sec61-beta/Sbh

Search form

Cicer_arietinum_v1_Contig2582