Cicer_arietinum_v1_Contig265

Contig Overview
NameCicer_arietinum_v1_Contig265
Unique NameCicer_arietinum_v1_Contig265
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length483
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FE668832ESTFE668832:1..257 +
GR407876ESTGR407876:1..341 +
ES560372ESTES560372:147..323 +
HO064501ESTHO064501:1..392 +
FE672611ESTFE672611:1..412 +
GR408720ESTGR408720:1..450 +
FE669916ESTFE669916:1..483 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FE668832FE668832Cicer arietinumEST
GR407876GR407876Cicer arietinumEST
ES560372ES560372Cicer arietinumEST
HO064501HO064501Cicer arietinumEST
FE672611FE672611Cicer arietinumEST
GR408720GR408720Cicer arietinumEST
FE669916FE669916Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TrEMBL
Match: C6TAG6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 7.966e-38
Identity = 75/91 (82.42%), Postives = 78/91 (85.71%), Query Frame = -2 
Query:  210 DEENHGSHEHHEDTPKEEDGEHLPKDKGGQRYNIQGRSRKHKYRAINGMGHGGTSSIHTAEASKPPPGPRMPDGTRGFAIGRGRPLVPASN 482
            DEENHGS+EH ED  +EEDG+HL KDKGGQRY  QGRSRKHKYRA NGMGHG T S H AEASKPPPGPRMPDGTRGFAIGRGR  VPASN
Sbjct:  315 DEENHGSNEHREDAHEEEDGDHLSKDKGGQRYRNQGRSRKHKYRAGNGMGHGSTPSTHAAEASKPPPGPRMPDGTRGFAIGRGRFPVPASN 405
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TrEMBL
Match: B9I0Z4_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_234558 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.275e-27
Identity = 57/88 (64.77%), Postives = 69/88 (78.41%), Query Frame = -2 
Query:  219 DEENHGSHEHHEDTPKEEDGEHLPKDKGGQRYNIQGRSRKHKYRAINGMGHGGTSSIHTAEASKPPPGPRMPDGTRGFAIGRGRPLVP 482
            D E H S EHH+DTP EEDGEH+ K+K GQ+   +GRSRK+K+R  NGMGH GT+S +  E SK PPGP+MPDGTRGFA+GRGRP +P
Sbjct:  209 DVEKHDSSEHHDDTPVEEDGEHISKEKNGQQGGNRGRSRKNKFRVTNGMGH-GTTSYNAVEFSKAPPGPKMPDGTRGFAVGRGRPPIP 295
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TrEMBL
Match: D7TK39_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021437001 PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.140e-26
Identity = 58/91 (63.74%), Postives = 67/91 (73.63%), Query Frame = -2 
Query:  210 DEENHGSHEHHEDTPKEEDGEHLPKDKGGQRYNIQGRSRKHKYRAINGMGHGGTSSIHTAEASKPPPGPRMPDGTRGFAIGRGRPLVPASN 482
            DEEN+ S E H++TP EEDGEHL K+K G R   +GRSR  KYR +NG GHG  SS + AE SKPPPGP+MPDGTRGF +GRGRP V   N
Sbjct:  253 DEENNSS-ERHDETPDEEDGEHLTKEKNGPRGRNRGRSRGQKYRCMNGQGHGTLSSSYGAEGSKPPPGPKMPDGTRGFTMGRGRPPVSRPN 342
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TrEMBL
Match: Q9FL36_ARATH (Similarity to RNA-binding protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.480e-17
Identity = 43/96 (44.79%), Postives = 60/96 (62.50%), Query Frame = -2 
Query:  201 HGSHE-HHEDTPKEEDGEHLPKDKGGQRYNIQGRSRKHKYRAINGMGHGGTSS-----IHTAEASKPPPGPRMPDGTRGFAIGRGRPLVPASN*QS 470
            H +H  HH D P ++DG +  KDK G +  + G+ R+  ++  NG+GHG  SS      H  E SK PPGPRMPDGTRGF +GRG+ + P ++ Q+
Sbjct:  312 HQNHRLHHSDNPADDDGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQT 407
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TrEMBL
Match: Q94A38_ARATH (AT5g46250/MPL12_3 OS=Arabidopsis thaliana GN=At5g46250 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.480e-17
Identity = 43/96 (44.79%), Postives = 60/96 (62.50%), Query Frame = -2 
Query:  201 HGSHE-HHEDTPKEEDGEHLPKDKGGQRYNIQGRSRKHKYRAINGMGHGGTSS-----IHTAEASKPPPGPRMPDGTRGFAIGRGRPLVPASN*QS 470
            H +H  HH D P ++DG +  KDK G +  + G+ R+  ++  NG+GHG  SS      H  E SK PPGPRMPDGTRGF +GRG+ + P ++ Q+
Sbjct:  323 HQNHRLHHSDNPADDDGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQT 418
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TrEMBL
Match: D7MRZ1_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_683381 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.402e-12
Identity = 38/99 (38.38%), Postives = 53/99 (53.54%), Query Frame = -2 
Query:  219 EENHGSHEHHEDTPKEE----DGEHLPKDKGGQRYNIQGRSRKHKYRAINGMGHGGTSSI--------HTAEASKPPPGPRMPDGTRGFAIGRGRPLVP 479
            E  H  H H ++T  +     DG +  KDK G +    G+ R+  ++  NG+GHG   +         H  E SK PPGP+MPDGTRGF +GRG+ + P
Sbjct:  322 EHQHHRHPHSDNTADDVSSILDGGNHQKDKNGNKGRGGGQGRRQNHQGGNGIGHGTAPAASSSSHHNYHPVEVSKRPPGPKMPDGTRGFTMGRGKAISP 420
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TrEMBL
Match: Q6ZJG0_ORYSJ (Os08g0542900 protein OS=Oryza sativa subsp. japonica GN=OJ1521_G02.20 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.670e-9
Identity = 45/115 (39.13%), Postives = 57/115 (49.57%), Query Frame = -2 
Query:  213 DEENHGSHEHHEDTPKEE--------------DGEHLPKDKGGQRYNI------QGRSRKHKYRAINGMGH--GGTSSIHTAEA---SKPPPGPRMPDGTRGFAIGRGRPLVPAS 482
            DE++  + +H +D   E+              DG H   DKGG R+        +GR R   Y       H  G   S H+A A   SKPPPGPRMPDGTRGF +GRG+PL P +
Sbjct:  314 DEDDPETTDHPQDYETEDASQISEAHLDHQADDGYH---DKGGMRHGRGRGRGGRGRGRGQYYGHSRDANHPIGTPPSNHSALADHPSKPPPGPRMPDGTRGFTMGRGKPLNPTN 425
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TrEMBL
Match: B8B975_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30107 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.670e-9
Identity = 45/115 (39.13%), Postives = 57/115 (49.57%), Query Frame = -2 
Query:  213 DEENHGSHEHHEDTPKEE--------------DGEHLPKDKGGQRYNI------QGRSRKHKYRAINGMGH--GGTSSIHTAEA---SKPPPGPRMPDGTRGFAIGRGRPLVPAS 482
            DE++  + +H +D   E+              DG H   DKGG R+        +GR R   Y       H  G   S H+A A   SKPPPGPRMPDGTRGF +GRG+PL P +
Sbjct:  314 DEDDPETTDHPQDYETEDASQISEAHLDHQADDGYH---DKGGMRHGRGRGRGGRGRGRGQYYGHSRDANHPIGTPPSNHSALADHPSKPPPGPRMPDGTRGFTMGRGKPLNPTN 425
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TrEMBL
Match: D5A9S8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.325e-8
Identity = 40/100 (40.00%), Postives = 54/100 (54.00%), Query Frame = -2 
Query:  213 DEENHGSHEHHEDTPKEEDGEHLPKDKGGQRYNIQGRSR-----KHKYRAINGMGH----GGTSSIHTAEAS-KPPPGPRMPDGTRGFAIGRGRPLVPAS 482
            D+++  + +H +     E   H P +K G R   +GR R     + +Y   NG GH      TSS  + E   K PPGPRMPDGTRGF +GRGRPL  ++
Sbjct:  363 DKQSKVTTQHSDRHDDFEGDAHYPNEKNGGRKG-RGRGRGKPRGRGQYHG-NGRGHPLNTASTSSSSSGEVVVKQPPGPRMPDGTRGFTMGRGRPLADSN 460
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TrEMBL
Match: D5A9L9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.325e-8
Identity = 40/100 (40.00%), Postives = 54/100 (54.00%), Query Frame = -2 
Query:  213 DEENHGSHEHHEDTPKEEDGEHLPKDKGGQRYNIQGRSR-----KHKYRAINGMGH----GGTSSIHTAEAS-KPPPGPRMPDGTRGFAIGRGRPLVPAS 482
            D+++  + +H +     E   H P +K G R   +GR R     + +Y   NG GH      TSS  + E   K PPGPRMPDGTRGF +GRGRPL  ++
Sbjct:  367 DKQSKVTTQHSDRHDDFEGDAHYPNEKNGGRKG-RGRGRGKPRGRGQYHG-NGRGHPLNTASTSSSSSGEVVVKQPPGPRMPDGTRGFTMGRGRPLADSN 464
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TAIR peptide
Match: AT5G46250.1 (| Symbols: | RNA-binding protein | chr5:18755388-18758056 FORWARD LENGTH=422)

HSP 1 Score: 91.2781 bits (225), Expect = 2.825e-19
Identity = 43/96 (44.79%), Postives = 60/96 (62.50%), Query Frame = -2 
Query:  201 HGSHE-HHEDTPKEEDGEHLPKDKGGQRYNIQGRSRKHKYRAINGMGHGGTSS-----IHTAEASKPPPGPRMPDGTRGFAIGRGRPLVPASN*QS 470
            H +H  HH D P ++DG +  KDK G +  + G+ R+  ++  NG+GHG  SS      H  E SK PPGPRMPDGTRGF +GRG+ + P ++ Q+
Sbjct:  323 HQNHRLHHSDNPADDDGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQT 418
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TAIR peptide
Match: AT2G43970.2 (| Symbols: | RNA-binding protein | chr2:18205535-18208031 REVERSE LENGTH=529)

HSP 1 Score: 50.447 bits (119), Expect = 5.527e-7
Identity = 33/108 (30.56%), Postives = 51/108 (47.22%), Query Frame = -2 
Query:  222 EENHGSHEHHEDTPKEEDGEHLPKDKG---GQRYNIQGRSRKHKYRAI---NGMG---HGGTSSIHTAEASKP-------------PPGPRMPDGTRGFAIGRGRPLV 479
            E+  G  + +E    +  G +  + KG   GQ +  Q ++  H +      NG G   H     + T  ++ P             PPGPRMPDGTRGF++GRG+P++
Sbjct:  418 EQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKPVM 525
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TAIR peptide
Match: AT2G43970.1 (| Symbols: | RNA-binding protein | chr2:18205535-18208031 REVERSE LENGTH=545)

HSP 1 Score: 50.447 bits (119), Expect = 5.527e-7
Identity = 33/108 (30.56%), Postives = 51/108 (47.22%), Query Frame = -2 
Query:  222 EENHGSHEHHEDTPKEEDGEHLPKDKG---GQRYNIQGRSRKHKYRAI---NGMG---HGGTSSIHTAEASKP-------------PPGPRMPDGTRGFAIGRGRPLV 479
            E+  G  + +E    +  G +  + KG   GQ +  Q ++  H +      NG G   H     + T  ++ P             PPGPRMPDGTRGF++GRG+P++
Sbjct:  434 EQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPHQNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKPVM 541
[Close]
BLAST of Cicer_arietinum_v1_Contig265 vs. TAIR peptide
Match: AT3G19090.1 (| Symbols: | RNA-binding protein | chr3:6601466-6603709 FORWARD LENGTH=455)

HSP 1 Score: 50.0618 bits (118), Expect = 7.218e-7
Identity = 35/108 (32.41%), Postives = 48/108 (44.44%), Query Frame = -2 
Query:  213 EDTPKEEDGEHLPK--------DKGGQRYNI---------QGRSRKHKYRAINGMGHG---------GTSSIHTAEASKPPP---GPRMPDGTRGFAIGRGRPLVPAS 449
            ++ P  E GE  P+        D  G   N+         +GR R  +  A+ G G           G  S+ + E+S P     GPRMPDGTRGF +GRG+P +  S
Sbjct:  344 DELPSYESGEDSPRLHLTESQLDNDGDDNNVGGLWGKGRGKGRGRSPRSYAVGGGGRSFGIGLGVSLGIPSLGSHESSSPKTATKGPRMPDGTRGFTMGRGKPSISLS 451
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig265 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TAG6_SOYBN7.966e-3882.42Putative uncharacterized protein OS=Glycine max PE... [more]
B9I0Z4_POPTR1.275e-2764.77Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7TK39_VITVI3.140e-2663.74Whole genome shotgun sequence of line PN40024, sca... [more]
Q9FL36_ARATH3.480e-1744.79Similarity to RNA-binding protein OS=Arabidopsis t... [more]
Q94A38_ARATH3.480e-1744.79AT5g46250/MPL12_3 OS=Arabidopsis thaliana GN=At5g4... [more]
D7MRZ1_ARALY4.402e-1238.38Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
Q6ZJG0_ORYSJ2.670e-939.13Os08g0542900 protein OS=Oryza sativa subsp. japoni... [more]
B8B975_ORYSI2.670e-939.13Putative uncharacterized protein OS=Oryza sativa s... [more]
D5A9S8_PICSI1.325e-840.00Putative uncharacterized protein OS=Picea sitchens... [more]
D5A9L9_PICSI1.325e-840.00Putative uncharacterized protein OS=Picea sitchens... [more]
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BLAST of Cicer_arietinum_v1_Contig265 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G46250.12.825e-1944.79| Symbols: | RNA-binding protein | chr5:18755388-... [more]
AT2G43970.25.527e-730.56| Symbols: | RNA-binding protein | chr2:18205535-... [more]
AT2G43970.15.527e-730.56| Symbols: | RNA-binding protein | chr2:18205535-... [more]
AT3G19090.17.218e-732.41| Symbols: | RNA-binding protein | chr3:6601466-6... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig265 ID=Cicer_arietinum_v1_Contig265; Name=Cicer_arietinum_v1_Contig265; organism=Cicer arietinum; type=contig; length=483bp
GTTTCATATTTCCCAGCCTAATAATCTTAAAATATTGCGCTCCACCAACA
CTACCTTTCACCAGAAAGGGCCACAAAATTAACAGTCCAACAAACCCTTG
AACGTTGACTCAAGCAAACACACATCAGAACCAAATTAAAACTTGTACAT
CGTCTAAACAACTGAAAATACAGTGAAATACAGTCCATTGTATGGCCTCA
ACTTTGCTAATTGGATGCAGGGACAAGAGGACGACCTCGTCCAATTGCAA
AACCCCTCGTTCCATCAGGCATTCTTGGTCCTGGGGGAGGTTTTGATGCT
TCGGCAGTATGAATAGATGATGTACCTCCATGGCCCATTCCATTTATAGC
ACGGTATTTATGCTTTCTTGATCTTCCTTGTATATTGTACCTCTGCCCAC
CTTTATCCTTCGGCAAATGCTCCCCATCCTCTTCCTTAGGTGTATCTTCA
TGATGCTCGTGTGAACCATGATTCTCCTCATCT
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