Cicer_arietinum_v1_Contig2678
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: C6T2V5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.114e-14 Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = -3 Query: 74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPRKDVPEWKLL 217 IGF+LMPWVLGLVM+FYVAGI+SSLSV GRSI C+A SPRKD+P WKL+ Sbjct: 81 IGFVLMPWVLGLVMLFYVAGILSSLSVFGRSILCYATAPPSPRKDIPAWKLM 132
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: B9GZN6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1074415 PE=4 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.114e-14 Identity = 38/51 (74.51%), Postives = 46/51 (90.20%), Query Frame = -3 Query: 74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA---SPRKDVPEWKLL 217 IGF+LMPWVLGLVMVFYVAG+VS++S+LGRSI C+A SPRK++P WKLL Sbjct: 78 IGFLLMPWVLGLVMVFYVAGVVSTVSMLGRSILCYATTPSPRKEIPAWKLL 128
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: A9PJ93_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.606e-14 Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = -3 Query: 74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA-----SPRKDVPEWKLL 217 IGF+LMPWVLGLVMVFYVAGIVS++S+LGRS+ C+A SPRK++P WKLL Sbjct: 77 IGFLLMPWVLGLVMVFYVAGIVSTISMLGRSLLCYATAPPSSPRKEIPAWKLL 129
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: A9PFD3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_708760 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.606e-14 Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = -3 Query: 74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA-----SPRKDVPEWKLL 217 IGF+LMPWVLGLVMVFYVAGIVS++S+LGRS+ C+A SPRK++P WKLL Sbjct: 77 IGFLLMPWVLGLVMVFYVAGIVSTISMLGRSLLCYATAPPSSPRKEIPAWKLL 129
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: B5TV75_CAMSI (Putative uncharacterized protein OS=Camellia sinensis PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.709e-14 Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = -3 Query: 74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCF----ASPRKDVPEWKLL 217 IGFMLMPWVLGLVMVFYV GIVSSLS++GR+I C ASPRK+VP WKLL Sbjct: 78 IGFMLMPWVLGLVMVFYVVGIVSSLSMIGRAILCHTTSPASPRKEVPAWKLL 129
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: B9RMC6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079670 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.789e-13 Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = -3 Query: 74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPRKDVPEWKLL 217 IGF+LMPWVLGLVMVFYVAG+VS++S+LGRS C A SPRK++P WKLL Sbjct: 83 IGFILMPWVLGLVMVFYVAGVVSTISMLGRSFLCHAMTPPSPRKEIPSWKLL 134
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: D7KBN5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472924 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.419e-10 Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = -3 Query: 74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPR-KDVPEWKLL 217 IGF+LMPWV+ L+MVFYVAGIVS++S++GRSI C+ SP K++ EWKLL Sbjct: 84 IGFLLMPWVIALIMVFYVAGIVSAISMVGRSILCYVLTPPSPSGKEISEWKLL 136
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: Q94F23_ARATH (Putative uncharacterized protein At1g27290; F17L21.8 OS=Arabidopsis thaliana GN=At1g27290/F17L21.8 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.159e-10 Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = -3 Query: 74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPR-KDVPEWKLL 217 IGF+LMPWVL L++VFYVAGIVS++S++GRSI C+ SP K++ EWKLL Sbjct: 90 IGFLLMPWVLALILVFYVAGIVSAISMVGRSILCYVLTPPSPSGKEISEWKLL 142
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: Q9FZK6_ARATH (F17L21.8 OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.602e-8 Identity = 25/35 (71.43%), Postives = 33/35 (94.29%), Query Frame = -3 Query: 113 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCF 217 IGF+LMPWVL L++VFYVAGIVS++S++GRSI C+ Sbjct: 89 IGFLLMPWVLALILVFYVAGIVSAISMVGRSILCY 123
BLAST of Cicer_arietinum_v1_Contig2678 vs. TAIR peptide
Match: AT1G27290.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9481788-9482576 FORWARD LENGTH=142) HSP 1 Score: 68.1662 bits (165), Expect = 1.214e-12 Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = -3 Query: 74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPR-KDVPEWKLL 217 IGF+LMPWVL L++VFYVAGIVS++S++GRSI C+ SP K++ EWKLL Sbjct: 90 IGFLLMPWVLALILVFYVAGIVSAISMVGRSILCYVLTPPSPSGKEISEWKLL 142
BLAST of Cicer_arietinum_v1_Contig2678 vs. TAIR peptide
Match: AT1G27290.1 (| Symbols: | unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9481788-9482576 FORWARD LENGTH=142) HSP 1 Score: 68.1662 bits (165), Expect = 1.214e-12 Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = -3 Query: 74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPR-KDVPEWKLL 217 IGF+LMPWVL L++VFYVAGIVS++S++GRSI C+ SP K++ EWKLL Sbjct: 90 IGFLLMPWVLALILVFYVAGIVSAISMVGRSILCYVLTPPSPSGKEISEWKLL 142 The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 9
BLAST of Cicer_arietinum_v1_Contig2678 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig2678 ID=Cicer_arietinum_v1_Contig2678; Name=Cicer_arietinum_v1_Contig2678; organism=Cicer arietinum; type=contig; length=219bpback to top |