Cicer_arietinum_v1_Contig2678

Contig Overview
NameCicer_arietinum_v1_Contig2678
Unique NameCicer_arietinum_v1_Contig2678
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length219
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
HO214251ESTHO214251:8..151 +
GR390856ESTGR390856:1..219 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO214251HO214251Cicer arietinumEST
GR390856GR390856Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: C6T2V5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.114e-14
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = -3
Query:   74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPRKDVPEWKLL 217
            IGF+LMPWVLGLVM+FYVAGI+SSLSV GRSI C+A    SPRKD+P WKL+
Sbjct:   81 IGFVLMPWVLGLVMLFYVAGILSSLSVFGRSILCYATAPPSPRKDIPAWKLM 132          
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: B9GZN6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1074415 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.114e-14
Identity = 38/51 (74.51%), Postives = 46/51 (90.20%), Query Frame = -3
Query:   74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA---SPRKDVPEWKLL 217
            IGF+LMPWVLGLVMVFYVAG+VS++S+LGRSI C+A   SPRK++P WKLL
Sbjct:   78 IGFLLMPWVLGLVMVFYVAGVVSTVSMLGRSILCYATTPSPRKEIPAWKLL 128          
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: A9PJ93_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.606e-14
Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = -3
Query:   74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA-----SPRKDVPEWKLL 217
            IGF+LMPWVLGLVMVFYVAGIVS++S+LGRS+ C+A     SPRK++P WKLL
Sbjct:   77 IGFLLMPWVLGLVMVFYVAGIVSTISMLGRSLLCYATAPPSSPRKEIPAWKLL 129          
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: A9PFD3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_708760 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.606e-14
Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = -3
Query:   74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA-----SPRKDVPEWKLL 217
            IGF+LMPWVLGLVMVFYVAGIVS++S+LGRS+ C+A     SPRK++P WKLL
Sbjct:   77 IGFLLMPWVLGLVMVFYVAGIVSTISMLGRSLLCYATAPPSSPRKEIPAWKLL 129          
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: B5TV75_CAMSI (Putative uncharacterized protein OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.709e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = -3
Query:   74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCF----ASPRKDVPEWKLL 217
            IGFMLMPWVLGLVMVFYV GIVSSLS++GR+I C     ASPRK+VP WKLL
Sbjct:   78 IGFMLMPWVLGLVMVFYVVGIVSSLSMIGRAILCHTTSPASPRKEVPAWKLL 129          
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: B9RMC6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079670 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.789e-13
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = -3
Query:   74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPRKDVPEWKLL 217
            IGF+LMPWVLGLVMVFYVAG+VS++S+LGRS  C A    SPRK++P WKLL
Sbjct:   83 IGFILMPWVLGLVMVFYVAGVVSTISMLGRSFLCHAMTPPSPRKEIPSWKLL 134          
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: D7KBN5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472924 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.419e-10
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = -3
Query:   74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPR-KDVPEWKLL 217
            IGF+LMPWV+ L+MVFYVAGIVS++S++GRSI C+     SP  K++ EWKLL
Sbjct:   84 IGFLLMPWVIALIMVFYVAGIVSAISMVGRSILCYVLTPPSPSGKEISEWKLL 136          
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: Q94F23_ARATH (Putative uncharacterized protein At1g27290; F17L21.8 OS=Arabidopsis thaliana GN=At1g27290/F17L21.8 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.159e-10
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = -3
Query:   74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPR-KDVPEWKLL 217
            IGF+LMPWVL L++VFYVAGIVS++S++GRSI C+     SP  K++ EWKLL
Sbjct:   90 IGFLLMPWVLALILVFYVAGIVSAISMVGRSILCYVLTPPSPSGKEISEWKLL 142          
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Match: Q9FZK6_ARATH (F17L21.8 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.602e-8
Identity = 25/35 (71.43%), Postives = 33/35 (94.29%), Query Frame = -3
Query:  113 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCF 217
            IGF+LMPWVL L++VFYVAGIVS++S++GRSI C+
Sbjct:   89 IGFLLMPWVLALILVFYVAGIVSAISMVGRSILCY 123          
BLAST of Cicer_arietinum_v1_Contig2678 vs. TAIR peptide
Match: AT1G27290.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9481788-9482576 FORWARD LENGTH=142)

HSP 1 Score: 68.1662 bits (165), Expect = 1.214e-12
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = -3
Query:   74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPR-KDVPEWKLL 217
            IGF+LMPWVL L++VFYVAGIVS++S++GRSI C+     SP  K++ EWKLL
Sbjct:   90 IGFLLMPWVLALILVFYVAGIVSAISMVGRSILCYVLTPPSPSGKEISEWKLL 142          
BLAST of Cicer_arietinum_v1_Contig2678 vs. TAIR peptide
Match: AT1G27290.1 (| Symbols: | unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:9481788-9482576 FORWARD LENGTH=142)

HSP 1 Score: 68.1662 bits (165), Expect = 1.214e-12
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = -3
Query:   74 IGFMLMPWVLGLVMVFYVAGIVSSLSVLGRSIXCFA----SPR-KDVPEWKLL 217
            IGF+LMPWVL L++VFYVAGIVS++S++GRSI C+     SP  K++ EWKLL
Sbjct:   90 IGFLLMPWVLALILVFYVAGIVSAISMVGRSILCYVLTPPSPSGKEISEWKLL 142          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2678 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 9
Match NameE-valueIdentityDescription
C6T2V5_SOYBN2.114e-1475.00Putative uncharacterized protein OS=Glycine max PE... [more]
B9GZN6_POPTR2.114e-1474.51Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PJ93_9ROSI3.606e-1471.70Putative uncharacterized protein OS=Populus tricho... [more]
A9PFD3_POPTR3.606e-1471.70Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B5TV75_CAMSI4.709e-1476.92Putative uncharacterized protein OS=Camellia sinen... [more]
B9RMC6_RICCO1.789e-1371.15Putative uncharacterized protein OS=Ricinus commun... [more]
D7KBN5_ARALY2.419e-1062.26Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q94F23_ARATH3.159e-1062.26Putative uncharacterized protein At1g27290; F17L21... [more]
Q9FZK6_ARATH8.602e-871.43F17L21.8 OS=Arabidopsis thaliana PE=4 SV=1[more]
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BLAST of Cicer_arietinum_v1_Contig2678 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G27290.21.214e-1262.26| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT1G27290.11.214e-1262.26| Symbols: | unknown protein; Has 44 Blast hits t... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2678 ID=Cicer_arietinum_v1_Contig2678; Name=Cicer_arietinum_v1_Contig2678; organism=Cicer arietinum; type=contig; length=219bp
TTTTTTTTCTANAGGGNGCATGAGCAGGCACAATACCAGTATCATACTGC
TCAATGCCATATTCATCTCCTCATAACAATTTCCACTCTGGAACATCCTT
ACGCGGCGAGGCGAAGCAAANAATGGAACGACCCAAAACAGAAAGAGATG
AAACGATACCAGCAACGTAAAACACCATAACCAATCCAAGAACCCACGGC
ATCAGCATAAACCCAATGA
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