Cicer_arietinum_v1_Contig2741

Contig Overview
NameCicer_arietinum_v1_Contig2741
Unique NameCicer_arietinum_v1_Contig2741
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length571
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR397804ESTGR397804:60..384 +Cicer arietinum unigene v1n/a
GR395123ESTGR395123:1..571 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR397804GR397804Cicer arietinumEST
GR395123GR395123Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig2741 vs. TrEMBL
Match: C6T1A4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.391e-22
Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = -3
Query:  192 KNPRQVTGHNCPNFSSERDLTGESFFPEEKSCRGILDKILFFIGDLEVAFADAKRSRVL 368
            KN  + TGHN    +SE D  GE    EE+SCRGILD+ILFFIGDLEVA A+AKRSRV+
Sbjct:  107 KNHEKETGHNSHTLNSEIDFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSRVI 165          

HSP 2 Score: 53.1434 bits (126), Expect = 1.391e-22
Identity = 23/27 (85.19%), Postives = 26/27 (96.30%), Query Frame = -2
Query:  367 GLKIIREGSDYYLVHQGEVQRYLGSRK 447
            G+KIIREG DYYLVHQGE+QR+LGSRK
Sbjct:   81 GMKIIREGIDYYLVHQGEIQRHLGSRK 107          
BLAST of Cicer_arietinum_v1_Contig2741 vs. TrEMBL
Match: C6T046_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.223e-20
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = -3
Query:  192 KNPRQVTGHNCPNFSSERDLTGESFFPEEKSCRGILDKILFFIGDLEVAFADAKRSRVL 368
            KN  +  GH     +SE +  GE    EE+SCRGILD+ILFFIGDLEVA A+AKRSRV+
Sbjct:  107 KNHEKEIGHCSNTLNSESNFNGEGSLAEERSCRGILDRILFFIGDLEVASAEAKRSRVI 165          

HSP 2 Score: 53.5286 bits (127), Expect = 1.223e-20
Identity = 23/27 (85.19%), Postives = 26/27 (96.30%), Query Frame = -2
Query:  367 GLKIIREGSDYYLVHQGEVQRYLGSRK 447
            GLKIIREG DYYL+HQGE+QR+LGSRK
Sbjct:   81 GLKIIREGIDYYLIHQGEIQRHLGSRK 107          
BLAST of Cicer_arietinum_v1_Contig2741 vs. TrEMBL
Match: B9RPL5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1381010 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 4.858e-15
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = -2
Query:  334 GLKIIREGSDYYLVHQGEVQRYLGSRKKSTTSNRPQLS 447
            GLKIIREG DYYLVHQGE+QRYLGSR+++  +    LS
Sbjct:   81 GLKIIREGGDYYLVHQGEIQRYLGSRRQNKRAFSSSLS 118          

HSP 2 Score: 48.1358 bits (113), Expect = 4.858e-15
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = -3
Query:  198 NFSSERDLTGE-SFFPEEKSCRGILDKILFFIGDLEVAFADAKRSR 332
            + SS+  L G+ S   EE S +G+LDKILFFIGDLEVA  D KRSR
Sbjct:  116 SLSSKGMLIGDKSMKEEEPSNQGMLDKILFFIGDLEVASTDTKRSR 161          
BLAST of Cicer_arietinum_v1_Contig2741 vs. TrEMBL
Match: Q6ZHC1_ORYSJ (Os02g0686500 protein OS=Oryza sativa subsp. japonica GN=OJ1717_A09.36 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 4.632e-11
Identity = 22/28 (78.57%), Postives = 28/28 (100.00%), Query Frame = -2
Query:  367 RGLKIIREGSDYYLVHQGEVQRYLGSRK 450
            RG++IIREGSDYYL++QGE+QRYLGSR+
Sbjct:   93 RGVRIIREGSDYYLIYQGEIQRYLGSRQ 120          

HSP 2 Score: 38.1206 bits (87), Expect = 4.632e-11
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = -3
Query:  195 EKSCRGILDKILFFIGDLEVAFADAKRSRV 284
            E   R I D+ILFF+GDLE A ADAKR +V
Sbjct:  135 EDEQRQISDRILFFLGDLEAACADAKRVKV 164          
BLAST of Cicer_arietinum_v1_Contig2741 vs. TrEMBL
Match: A3AA79_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_07967 PE=4 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 1.726e-10
Identity = 21/27 (77.78%), Postives = 27/27 (100.00%), Query Frame = -2
Query:  367 GLKIIREGSDYYLVHQGEVQRYLGSRK 447
            G++IIREGSDYYL++QGE+QRYLGSR+
Sbjct:   81 GVRIIREGSDYYLIYQGEIQRYLGSRQ 107          

HSP 2 Score: 38.1206 bits (87), Expect = 1.726e-10
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = -3
Query:  195 EKSCRGILDKILFFIGDLEVAFADAKRSRV 284
            E   R I D+ILFF+GDLE A ADAKR +V
Sbjct:  122 EDEQRQISDRILFFLGDLEAACADAKRVKV 151          
BLAST of Cicer_arietinum_v1_Contig2741 vs. TrEMBL
Match: A2X8E9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08510 PE=4 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 1.731e-10
Identity = 21/27 (77.78%), Postives = 27/27 (100.00%), Query Frame = -2
Query:  367 GLKIIREGSDYYLVHQGEVQRYLGSRK 447
            G++IIREGSDYYL++QGE+QRYLGSR+
Sbjct:   81 GVRIIREGSDYYLIYQGEIQRYLGSRQ 107          

HSP 2 Score: 38.1206 bits (87), Expect = 1.731e-10
Identity = 19/30 (63.33%), Postives = 22/30 (73.33%), Query Frame = -3
Query:  195 EKSCRGILDKILFFIGDLEVAFADAKRSRV 284
            E   R I D+ILFF+GDLE A ADAKR +V
Sbjct:  122 EDEQRQISDRILFFLGDLEAACADAKRVKV 151          
BLAST of Cicer_arietinum_v1_Contig2741 vs. TrEMBL
Match: C5Y0V6_SORBI (Putative uncharacterized protein Sb04g031540 OS=Sorghum bicolor GN=Sb04g031540 PE=4 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 3.957e-9
Identity = 21/31 (67.74%), Postives = 28/31 (90.32%), Query Frame = -2
Query:  355 GLKIIREGSDYYLVHQGEVQRYLGSRKKSTT 447
            G++IIREG DYYL++QGE+QRYLGSR+ + T
Sbjct:   81 GVRIIREGKDYYLIYQGEIQRYLGSRQDTDT 111          

HSP 2 Score: 33.4982 bits (75), Expect = 3.957e-9
Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = -3
Query:  204 RGILDKILFFIGDLEVAFADAKR 272
            R I ++ILFF+GDLE A ADAKR
Sbjct:  129 RQISNRILFFLGDLEKACADAKR 151          
BLAST of Cicer_arietinum_v1_Contig2741 vs. TrEMBL
Match: B6SX39_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 3.296e-7
Identity = 20/27 (74.07%), Postives = 26/27 (96.30%), Query Frame = -2
Query:  367 GLKIIREGSDYYLVHQGEVQRYLGSRK 447
            G++IIREG DYYL++QGE+QRYLGSR+
Sbjct:   81 GVRIIREGKDYYLIYQGEIQRYLGSRQ 107          

HSP 2 Score: 28.4906 bits (62), Expect = 3.296e-7
Identity = 18/44 (40.91%), Postives = 22/44 (50.00%), Query Frame = -3
Query:  228 RQVTGHNCPNFSSERDLTGESFFPEEKSCRGILDKILFFIGDLE 359
            RQ T  +C   +  RD   E         R I D+ILFF+GDLE
Sbjct:  106 RQDTDGDCGEDAPRRDAGDEH--------RQISDRILFFLGDLE 141          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2741 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
C6T1A4_SOYBN1.391e-2264.41Putative uncharacterized protein OS=Glycine max PE... [more]
C6T046_SOYBN1.223e-2059.32Putative uncharacterized protein OS=Glycine max PE... [more]
B9RPL5_RICCO4.858e-1568.42Putative uncharacterized protein OS=Ricinus commun... [more]
Q6ZHC1_ORYSJ4.632e-1178.57Os02g0686500 protein OS=Oryza sativa subsp. japoni... [more]
A3AA79_ORYSJ1.726e-1077.78Putative uncharacterized protein OS=Oryza sativa s... [more]
A2X8E9_ORYSI1.731e-1077.78Putative uncharacterized protein OS=Oryza sativa s... [more]
C5Y0V6_SORBI3.957e-967.74Putative uncharacterized protein Sb04g031540 OS=So... [more]
B6SX39_MAIZE3.296e-774.07Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2741 ID=Cicer_arietinum_v1_Contig2741; Name=Cicer_arietinum_v1_Contig2741; organism=Cicer arietinum; type=contig; length=571bp
AAGTAATATTACAATATATATAATATCATAGTAAGATACAACTGAGTATT
AGTGTAAACTTTTTTACTCAATACATATTTATTAAACTGATAAGTATGTA
CTAGTATATACATGAAACAATGCTTACATACAAACATACAAAGAAGTTTC
ACATTGAACTTCACTATTGGATTGAGTGATAGATATCATCATAACACACG
GCTGCGTTTGGCATCAGCAAAAGCAACTTCCAAATCCCCAATGAAAAAAA
GGATTTTGTCCAAAATTCCCCGACACGATTTCTCTTCAGGGAAAAAACTT
TCTCCAGTCAAGTCCCTTTCCGAACTAAAATTAGGACAGTTGTGGCCGGT
TACTTGTCGTGGATTTTTTTCTTGAACCCAGATATCGTTGTACCTCACCT
TGGTGAACAAGATAGTAGTCACTTCCTTCTCTAATAATCTTCAAACCCCT
GATCTACCTTGGATTCTGTTCTGTGGTGTGGTAATAATAACGCGGTACTG
TTTCTAACACTATCTATCTTTCCGTTGAAAGATATCCACTTAGTTCCGAT
CCGAGTACAACGAATCCCCGC
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