Cicer_arietinum_v1_Contig2756

Contig Overview
NameCicer_arietinum_v1_Contig2756
Unique NameCicer_arietinum_v1_Contig2756
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length621
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR392145ESTGR392145:1..570 +
HO067656ESTHO067656:219..565 +
GR395659ESTGR395659:384..621 -
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR392145GR392145Cicer arietinumEST
HO067656HO067656Cicer arietinumEST
GR395659GR395659Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig2756 vs. TrEMBL
Match: Q0GPH4_SOYBN (BZIP transcription factor bZIP68 OS=Glycine max GN=bZIP68 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.122e-26
Identity = 66/112 (58.93%), Postives = 80/112 (71.43%), Query Frame = 2
Query:    2 AENHALRLCLQSRGAFGASMTMQESAVXXXXXXXXXXXXWFMGIICQLSLPLILWLTVLPTRENNMEQKGLIKVALKGPKSKNSEYLLTQSFVTSRRCQASRTKMKFDFLMF 337
            AEN+ALRLCLQ RG +GASMTMQESAV            W MGIIC LSLPL+LW+  +  RE N+EQKGL +V  KG +SK SE    QSF+ SR+ +ASRTKMKF+F++F
Sbjct:  174 AENNALRLCLQLRGTYGASMTMQESAVLLLEPLLLGSLLWCMGIICHLSLPLMLWVAAVLPRE-NIEQKGLRRVTQKGSESKISECFQMQSFLKSRKSRASRTKMKFNFIVF 284          
BLAST of Cicer_arietinum_v1_Contig2756 vs. TrEMBL
Match: D7UDG5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_122.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00013443001 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.519e-15
Identity = 52/107 (48.60%), Postives = 65/107 (60.75%), Query Frame = 2
Query:    2 AENHALRLCLQSRGAFGASMTMQESAVXXXXXXXXXXXXWFMGIIC-QLSLPLILWLTVLPTRENNMEQKGLIKVALKGPKSKNSEYLLTQSFVTSRRCQASRTKMK 319
            AEN  LRL LQ+  AFGAS+T QESAV            WF+GI+C  LSLP+   L+       ++E KG   VA +GP SK  E  L QS+V S+RC+AS+TKMK
Sbjct:   76 AENQTLRLHLQNEKAFGASVTKQESAVLLMESLLLGSLLWFLGIMCLALSLPVQFQLSREAVPMGSVEDKGQKSVAPRGPGSKIFELWLLQSYVKSKRCKASKTKMK 182          
BLAST of Cicer_arietinum_v1_Contig2756 vs. TrEMBL
Match: C6TD33_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.541e-15
Identity = 46/84 (54.76%), Postives = 52/84 (61.90%), Query Frame = 2
Query:    2 AENHALRLCLQSRGAFGASMTMQESAVXXXXXXXXXXXXWFMGIICQLSLPLILWLTVLPTRENNMEQKGLIKVALKGPKSKNS 253
            AEN+ALRLCLQ RGA+GASMTMQESAV            W MGIIC LSLPL+LW+  +  REN         +  KGPK  NS
Sbjct:  174 AENNALRLCLQLRGAYGASMTMQESAVLLLEPLLLGSLLWCMGIICHLSLPLMLWVAAVLPREN---------IEQKGPKKGNS 248          
BLAST of Cicer_arietinum_v1_Contig2756 vs. TrEMBL
Match: B9R8U7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1602280 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.975e-12
Identity = 45/106 (42.45%), Postives = 59/106 (55.66%), Query Frame = 2
Query:    2 AENHALRLCLQSRGAFGASMTMQESAVXXXXXXXXXXXXWFMGIICQLSLPLILWLTVLPTRENNMEQKGLIKVALKGPKSKNSEYLLTQSFVTSRRCQASRTKMK 319
            AEN ALRL LQ   AFG ++  QESAV            WF+GI+C  +L  +  LT++     N+ +    KV  +G  SK    L  QSFV SR+C+ASRT+MK
Sbjct:  195 AENQALRLGLQKGNAFGVTLAKQESAVLLLESLLLGSLLWFLGIMCLFTLSAMSQLTLVAVPLENVGK----KVPERGAGSKMFTSLANQSFVNSRKCKASRTRMK 296          
BLAST of Cicer_arietinum_v1_Contig2756 vs. TrEMBL
Match: B2CM16_SOLCH (BZIP transcription factor protein OS=Solanum chacoense PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.019e-11
Identity = 45/108 (41.67%), Postives = 56/108 (51.85%), Query Frame = 2
Query:    2 AENHALRLCLQSRGAFGASMTMQESAVXXXXXXXXXXXXWFMGIICQLSLPLILWLTVLPTRENNMEQKGLIKVALKGPKSKNSEYLLTQSFVTSRRCQASRTKMKFD 325
            AEN ALR  LQ+  A G SMT QESAV            WF+GI C L LP   W   +P         GL+    +G   K S  LL  SF+  +RC+ASR++MKF+
Sbjct:  178 AENQALRFSLQNSSANGVSMTKQESAVLLLESLLLGSLLWFLGITCLLILPSQTW--SVPEENQGSRNHGLLLPIKEG--KKTSRILLFLSFMMGKRCKASRSRMKFN 281          
BLAST of Cicer_arietinum_v1_Contig2756 vs. TrEMBL
Match: A7VKB4_TOBAC (Basic region leucine zipper protein OS=Nicotiana tabacum GN=NtbZIP60 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.738e-11
Identity = 47/108 (43.52%), Postives = 57/108 (52.78%), Query Frame = 2
Query:    2 AENHALRLCLQSRGAFGASMTMQESAVXXXXXXXXXXXXWFMGIICQLSLPLILWLTVLPTRENNMEQKGLIKVALKGPKSKNSEYLLTQSFVTSRRCQASRTKMKFD 325
            AEN ALR  LQS  A GA MT QESAV            WFMGIIC L LP   WL  +P         GL+ V +KG  +K        S +  +RC+ASR++MKF+
Sbjct:  188 AENQALRFSLQSSSANGACMTKQESAVLLLESLLLGSLLWFMGIICLLILPSQPWL--IPEENQRSRNHGLL-VPIKG-GNKTGRIFEFLSLMMGKRCKASRSRMKFN 291          
BLAST of Cicer_arietinum_v1_Contig2756 vs. TrEMBL
Match: Q3L0T7_CAPAN (BZIP transcription factor protein OS=Capsicum annuum GN=bZIP1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.270e-11
Identity = 44/108 (40.74%), Postives = 56/108 (51.85%), Query Frame = 2
Query:    2 AENHALRLCLQSRGAFGASMTMQESAVXXXXXXXXXXXXWFMGIICQLSLPLILWLTVLPTRENNMEQKGLIKVALKGPKSKNSEYLLTQSFVTSRRCQASRTKMKFD 325
            AEN ALR  LQ+  A G SMT QESAV            WF+GI C L LP   W   +P         GL+    +G K+  S  L   SF+  +RC+ASR++MKF+
Sbjct:  175 AENQALRFSLQNSSANGVSMTKQESAVLLLESLLLGSLLWFLGISCLLILPSQTW--SIPEENQGSRNPGLLVPIKRGKKTSRS--LAFLSFMMGKRCKASRSRMKFN 278          
BLAST of Cicer_arietinum_v1_Contig2756 vs. TrEMBL
Match: B9H5X3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_818888 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.282e-10
Identity = 43/112 (38.39%), Postives = 56/112 (50.00%), Query Frame = 2
Query:    2 AENHALRLCLQSRGAFGASMTMQESAVXXXXXXXXXXXXWFMGIICQLSLPLILWLTVLPTRENNMEQKGLIKVALKGPKSKNSEYLLTQSFVTSRRCQASRTKMKFDFLMF 337
            AENHALRL LQ   AFG +   QESAV            W +GI+C    P +   T++      ME+K    VA +G  SK     +  S   SRRC+ASR +MK   ++F
Sbjct:  193 AENHALRLSLQRGNAFGVTSAKQESAVLLLESLLLGSLLWLLGIMCLFPQPAMPQSTMVEVLLETMEKKAPENVAQRGAGSK-----IFISLANSRRCKASRPRMKLTGVIF 299          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2756 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
Q0GPH4_SOYBN1.122e-2658.93BZIP transcription factor bZIP68 OS=Glycine max GN... [more]
D7UDG5_VITVI1.519e-1548.60Whole genome shotgun sequence of line PN40024, sca... [more]
C6TD33_SOYBN7.541e-1554.76Putative uncharacterized protein (Fragment) OS=Gly... [more]
B9R8U7_RICCO5.975e-1242.45Putative uncharacterized protein OS=Ricinus commun... [more]
B2CM16_SOLCH1.019e-1141.67BZIP transcription factor protein OS=Solanum chaco... [more]
A7VKB4_TOBAC1.738e-1143.52Basic region leucine zipper protein OS=Nicotiana t... [more]
Q3L0T7_CAPAN2.270e-1140.74BZIP transcription factor protein OS=Capsicum annu... [more]
B9H5X3_POPTR4.282e-1038.39Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 28..39
score
NoneNo IPR availableSEGsegsegcoord: 22..37
score
NoneNo IPR availableSEGsegsegcoord: 11..26
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2756 ID=Cicer_arietinum_v1_Contig2756; Name=Cicer_arietinum_v1_Contig2756; organism=Cicer arietinum; type=contig; length=621bp
TGCTGAGAACCATGCTTTGCGGCTTTGTTTGCAATCACGTGGTGCATTTG
GTGCTTCCATGACCATGCAGGAGTCTGCTGTGCTCTTGTTGGAATCCCTG
CTGCTGGGTTCCCTGCTATGGTTCATGGGCATCATATGCCAACTCAGTCT
ACCCCTCATACTGTGGCTAACAGTGTTACCTACAAGAGAAAACAACATGG
AACAGAAAGGTCTAATAAAAGTGGCTCTAAAAGGGCCAAAAAGTAAAAAC
TCTGAGTATTTATTGACTCAGTCGTTTGTAACAAGTAGAAGATGCCAAGC
TTCAAGAACAAAAATGAAATTCGATTTTCTCATGTTCTAAAACTTTTGAA
GTGGGGCCTTTCAGGTGTTCTGTTCCTTCCTTCTTTCTTTGCCTTTTCTT
TCTGTTTCTATATTTATTGAGATTTTTAGATAGAGTTGTAAACCGAACAT
GTTGGAGTCATATTTATCAGTATCAGCTTCTATGTTTTCTTGTTTGAACT
TATTATAGGACTATAGTGTGCTCTGTGTTCTTCCTATTTGAAACATGGAA
GCTATTTTTGTATGTAGACCGCATGGGTTTTTTATTTTTAGTGCTTATAA
ACAATAGTTTTTCTTTTCAAG
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