Cicer_arietinum_v1_Contig2783

Contig Overview
NameCicer_arietinum_v1_Contig2783
Unique NameCicer_arietinum_v1_Contig2783
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length678
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR402305ESTGR402305:89..531 +Cicer arietinum unigene v1n/a
GR395096ESTGR395096:1..567 +Cicer arietinum unigene v1n/a
GR408931ESTGR408931:231..678 +Cicer arietinum unigene v1n/a
GR406978ESTGR406978:361..678 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR402305GR402305Cicer arietinumEST
GR395096GR395096Cicer arietinumEST
GR408931GR408931Cicer arietinumEST
GR406978GR406978Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig2783 vs. TrEMBL
Match: C6TB21_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.799e-32
Identity = 80/162 (49.38%), Postives = 102/162 (62.96%), Query Frame = 1
Query:   37 MKSKGQSQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYGNPMDAAGKFXXXXXXXXXXXXXXXXXXXXFGDNSEDFAELVRAASARTLVNRIDMDLVLKQQQLKK----SNKGLPKSSSVGMAKIDEDMPFDYSSVEKRGGVGIVHDSYPRSKSYALG 510
            M+   + +N  V ++ +P R LGKARD YV SIT CG NM+Y NP+DAAG+F                      DN+EDFAEL+RAASARTL N ID+DLV+KQQ   +    S+ GLPKS+SVGM +IDED P+D       G V +V  +YPRS+SYA+G
Sbjct:    1 MRKGNKKKNKLVWMIATPFRVLGKARDMYVSSITKCGHNMNYSNPVDAAGRFQALPRSYSAATSR--------SDNNEDFAELLRAASARTLGNIIDVDLVVKQQAQTQTRPVSSNGLPKSTSVGMGRIDEDTPYDLG----EGEVPVVPKAYPRSRSYAVG 150          
BLAST of Cicer_arietinum_v1_Contig2783 vs. TrEMBL
Match: D7KKM4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_888272 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.432e-20
Identity = 68/158 (43.04%), Postives = 92/158 (58.23%), Query Frame = 1
Query:   55 SQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYGNPMDAAGKF--XXXXXXXXXXXXXXXXXXXXFGDNSEDFAELVRAASARTLVNRIDMDLVLK---QQQLKKSNKGLPKSSSVGMAKIDEDMPFDYSSVE-KRGGVGIVHD-SYPRSKSYAL 507
            +QN F+RI+ +P+RALGKARD YVRSIT C     Y +    +  F                      FG + ED++ELVRAAS R+L ++ ++D++L+   QQQ ++   GLPKSSSVGMAKI+E+   +  SV  K      V D  YPRSKSYA+
Sbjct:    4 NQNRFLRIISTPLRALGKARDFYVRSITGCAARTQYSSSASVSAPFPRSRSSSSAAFSSSASSRRATDFGID-EDYSELVRAASVRSLGHKNEIDMLLQEKLQQQRQQKQGGLPKSSSVGMAKIEEEEETEEGSVNPKMKKTKKVSDLLYPRSKSYAV 160          
BLAST of Cicer_arietinum_v1_Contig2783 vs. TrEMBL
Match: Q9SY56_ARATH (At1g10140 OS=Arabidopsis thaliana GN=At1g10140 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.402e-18
Identity = 65/159 (40.88%), Postives = 92/159 (57.86%), Query Frame = 1
Query:   52 QSQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYGNPMDAAGKF--XXXXXXXXXXXXXXXXXXXXFGDNSEDFAELVRAASARTLVNRIDMDLVLK---QQQLKKSNKGLPKSSSVGMAKIDEDMPFDYSSVE-KRGGVGIVHD-SYPRSKSYAL 507
            Q+Q+ F+RI+ +P+RALGKARD YVRSIT C     Y +    +  F                      FG + ED++ELVRAAS R+L ++ ++D++++   QQQ ++   GLPKSSS GMA+I+E+   +  SV  K      V D  YPRSKSYA+
Sbjct:    3 QNQSKFLRIISTPLRALGKARDFYVRSITGCAARTQYSSSASVSAPFPRSRSSSSAAFSSSASSRRTTDFGID-EDYSELVRAASVRSLGHKNEIDMLIQEKLQQQKQQKQGGLPKSSSAGMARIEEEEETEEGSVNPKVKKTKKVSDLLYPRSKSYAV 160          
BLAST of Cicer_arietinum_v1_Contig2783 vs. TrEMBL
Match: B9R6Y1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1586760 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.831e-18
Identity = 64/173 (36.99%), Postives = 91/173 (52.60%), Query Frame = 1
Query:   37 MKSKGQSQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYGNPMDAAGKFXXXXXXXXXXXXXXXXXXXXFGDNSEDFAELVRAASARTLVNRIDMDLVL----KQQQLKKSNKGLPKSSSVG---MAKIDEDMPFDYSSVE--KRGGVGIVHDSYPRSKSYALGNRNVDF 528
            MK K Q Q+ F++I   P++ LGKARD YV+SIT C     YG+ M                            D  +D+ +L+RAAS R+L ++ ++D++L    +QQQ ++  K LPKS SVG   M +I+E+   D  SV+  KRG      D YPRS+SYA+  R   F
Sbjct:    1 MKDKKQKQSKFMKIATIPLKVLGKARDLYVKSITGCATRTSYGHSMSMPN---------GQLPKSHSMGSTMSSDGGDDYGDLIRAASVRSLGHKNEIDMLLQQMKQQQQQQQQQKQLPKSVSVGMGFMGRIEEENGEDEGSVDGSKRGAKA---DLYPRSRSYAVAERTPAF 161          
BLAST of Cicer_arietinum_v1_Contig2783 vs. TrEMBL
Match: Q9C647_ARATH (At1g58420 OS=Arabidopsis thaliana GN=At1g58420 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.956e-18
Identity = 63/182 (34.62%), Postives = 97/182 (53.30%), Query Frame = 1
Query:   37 MKSKGQSQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYGNPMDAAGKFXXXXXXXXXXXXXXXXXXXXFGDNS--EDFAELVRAASARTLVNRIDMDLVLKQQQLKKSNK--------------GLPKSSSVG--MAKIDEDMPFDYSSVEKRGGVGIVHDSYPRSKSYALGNRNVDF 528
            M  +GQ QN F+RI+  P++ L KARD Y+RSIT C    HY + +DAA                         D +  +D++EL+RAAS R+L ++ ++D++++QQQ ++  +              GLPKSSSVG  MA+IDE+   + S   ++ G   +   YPRS+S+A+  R   F
Sbjct:    1 MGKRGQKQNRFLRIVTMPLKVLCKARDLYMRSITGCAARTHYSSAVDAASVPFPRSRSTSSAFSSSASSRRRSSDFTFDDDYSELLRAASVRSLGHKNEIDMIIQQQQQQQQQRQENRVAMGAVTVKGGLPKSSSVGMTMARIDEEDEEEGSVKNQKKGSDFL---YPRSRSHAVTIRGSKF 179          
BLAST of Cicer_arietinum_v1_Contig2783 vs. TrEMBL
Match: Q8LF77_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.643e-17
Identity = 62/182 (34.07%), Postives = 96/182 (52.75%), Query Frame = 1
Query:   37 MKSKGQSQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYGNPMDAAGKFXXXXXXXXXXXXXXXXXXXXFGDNS--EDFAELVRAASARTLVNRIDMDLVLKQQQLKKSNK--------------GLPKSSSVG--MAKIDEDMPFDYSSVEKRGGVGIVHDSYPRSKSYALGNRNVDF 528
            M  +GQ QN F+RI+  P++ L KARD Y+RSIT C    HY + +DAA                         D +  +D++EL+RAAS R+L ++ ++D++++QQQ ++  +              GLPKSSSVG  MA+ DE+   + S   ++ G   +   YPRS+S+A+  R   F
Sbjct:    1 MGKRGQKQNRFLRIVTMPLKVLCKARDLYMRSITGCAARTHYSSAVDAASVPFPRSRSTSSAFSSSASSRRRSSDFTFDDDYSELLRAASVRSLGHKNEIDMIIQQQQQQQQQRQENRVAMGAVTVKGGLPKSSSVGMTMARXDEEDEEEGSVKNQKKGSDFL---YPRSRSHAVTIRGSKF 179          
BLAST of Cicer_arietinum_v1_Contig2783 vs. TrEMBL
Match: D7KY59_ARALY (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475391 PE=4 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.643e-17
Identity = 64/179 (35.75%), Postives = 97/179 (54.19%), Query Frame = 1
Query:   37 MKSKGQSQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYGNPMDAAGKFXXXXXXXXXXXXXXXXXXXXFGDNS--EDFAELVRAASARTLVNRIDMDLV------LKQQQLKKSNK------------GLPKSSSVG--MAKIDEDMPFDYSSVEKRGGVGIVHDSYPRSKSYAL 507
            M  +GQ QN F+RI+  P++ L KARD Y+RSIT C    HY + +DAA                         D +  +D++EL+RAASAR+L ++ ++D++      L+QQQ ++ N+            GLPKSSSVG  MA+IDE+   + S   ++ G   +   YPRS+S+A+
Sbjct:    1 MGKRGQKQNKFLRIVTMPLKVLCKARDLYMRSITGCAARTHYSSAVDAASVPFPRSRSTSSAFSSSASSRRRSSDFTFDDDYSELLRAASARSLGHKNEIDMIIHQQLQLQQQQQRQENRVAMGAVAVAVKGGLPKSSSVGMTMARIDEEDEEEGSLKNQKKGSDFL---YPRSRSHAV 176          
BLAST of Cicer_arietinum_v1_Contig2783 vs. TrEMBL
Match: B9IBP9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_663718 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.985e-16
Identity = 67/174 (38.51%), Postives = 91/174 (52.30%), Query Frame = 1
Query:   37 MKSKGQSQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYG-NPMDAAGKFXXXXXXXXXXXXXXXXXXXXFGDNSEDFAELVRAASARTL--VNRIDMDLVLKQQQ----LKKSNKGLPKSSSVG---MAKIDEDMPFDYSSVEKRGGVGIVHDSYPRSKSYALGNRNVDF 528
            MK+K  +Q+ F+R++  P+R L KARD YV+S+T+C   M YG + +  AG+                        + ED+ ELVRAASAR+L   N I+M + L +QQ    +  S K LPKS SVG   M KIDE+ P     V + G V +     PRS S A+G   V F
Sbjct:    1 MKTKAHNQSKFMRVITIPLRVLCKARDVYVKSMTDCSMGMRYGPSIVSRAGQHPPLPRSFSVSSSRS-------DHDGEDYRELVRAASARSLGHSNEIEMYMQLLRQQQSSMMTGSKKVLPKSCSVGMGFMGKIDEEKP----CVFEAGAVDVKPQLGPRSSSCAVGKGRVAF 163          
BLAST of Cicer_arietinum_v1_Contig2783 vs. TrEMBL
Match: B9IBQ0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572022 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.220e-15
Identity = 69/168 (41.07%), Postives = 90/168 (53.57%), Query Frame = 1
Query:   37 MKSKGQSQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYGNPMD-AAGKFXXXXXXXXXXXXXXXXXXXXFGDNSEDFAELVRAASARTL--VNRIDMDL-VLKQQQLKK---SNKGLPKSSSVG---MAKIDEDMPFDYSSVEKRGGVGIVHDSYPRSKSYALG 510
            MK+K Q+Q+ F+R+M  P+R L KARD YV+S+T+    M  G  M   AG+                       D+ ED  +LVRAASAR+L   N I+M +  L+QQQ      S K LPKSSSVG   M +IDED     S V +  GV +     PRS+SYA+G
Sbjct:    1 MKTKAQNQSKFMRVMTIPVRVLCKARDVYVKSMTDFSMRMSNGPSMALLAGQHPPLPKSFSVGSSR--------SDDGEDHRQLVRAASARSLGHSNEIEMYMQQLRQQQSSMTMGSKKVLPKSSSVGMRCMGRIDEDK----SCVFEEVGVDVKPQLGPRSRSYAVG 156          
BLAST of Cicer_arietinum_v1_Contig2783 vs. TrEMBL
Match: B9GNN3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_551767 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.735e-14
Identity = 59/170 (34.71%), Postives = 90/170 (52.94%), Query Frame = 1
Query:   37 MKSKGQSQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYGNPMD-AAGKFXXXXXXXXXXXXXXXXXXXXFGDNSEDFAELVRAASARTLVNRIDMDLV---LKQQQ---LKKSNKGLPKSSSVG---MAKIDEDMPFDYSSVEKRGGVGIVHDSYPRSKSYALGNR 516
            MK+K  +Q+ F+R++  P+R L KARD YV+SI +C   M YG+ M    G++                      +++ED+ +LVRAASAR+L  R ++++    L+QQQ   +  S   LPKS   G   M +ID D P D+   E   G  +     PRS+S+A+G +
Sbjct:    1 MKTKAHNQSKFMRVVAIPVRLLCKARDVYVKSIIDCSTRMGYGHSMALPTGRYPPLPWSFSIGSSRC--------NDNEDYRKLVRAASARSLGQRNEIEMFIQQLRQQQSSIMVGSKMFLPKSCGFGMGIMGRIDGDKPCDF---ETGAGAVVKPQLGPRSRSFAVGRK 159          
BLAST of Cicer_arietinum_v1_Contig2783 vs. TAIR peptide
Match: AT1G10140.1 (| Symbols: | Uncharacterised conserved protein UCP031279 | chr1:3322970-3323473 REVERSE LENGTH=167)

HSP 1 Score: 97.0561 bits (240), Expect = 9.614e-21
Identity = 65/159 (40.88%), Postives = 92/159 (57.86%), Query Frame = 1
Query:   52 QSQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYGNPMDAAGKF--XXXXXXXXXXXXXXXXXXXXFGDNSEDFAELVRAASARTLVNRIDMDLVLK---QQQLKKSNKGLPKSSSVGMAKIDEDMPFDYSSVE-KRGGVGIVHD-SYPRSKSYAL 507
            Q+Q+ F+RI+ +P+RALGKARD YVRSIT C     Y +    +  F                      FG + ED++ELVRAAS R+L ++ ++D++++   QQQ ++   GLPKSSS GMA+I+E+   +  SV  K      V D  YPRSKSYA+
Sbjct:    3 QNQSKFLRIISTPLRALGKARDFYVRSITGCAARTQYSSSASVSAPFPRSRSSSSAAFSSSASSRRTTDFGID-EDYSELVRAASVRSLGHKNEIDMLIQEKLQQQKQQKQGGLPKSSSAGMARIEEEEETEEGSVNPKVKKTKKVSDLLYPRSKSYAV 160          
BLAST of Cicer_arietinum_v1_Contig2783 vs. TAIR peptide
Match: AT1G58420.1 (| Symbols: | Uncharacterised conserved protein UCP031279 | chr1:21707407-21707946 FORWARD LENGTH=179)

HSP 1 Score: 94.7449 bits (234), Expect = 4.772e-20
Identity = 63/182 (34.62%), Postives = 97/182 (53.30%), Query Frame = 1
Query:   37 MKSKGQSQNTFVRIMCSPIRALGKARDAYVRSITNCGQNMHYGNPMDAAGKFXXXXXXXXXXXXXXXXXXXXFGDNS--EDFAELVRAASARTLVNRIDMDLVLKQQQLKKSNK--------------GLPKSSSVG--MAKIDEDMPFDYSSVEKRGGVGIVHDSYPRSKSYALGNRNVDF 528
            M  +GQ QN F+RI+  P++ L KARD Y+RSIT C    HY + +DAA                         D +  +D++EL+RAAS R+L ++ ++D++++QQQ ++  +              GLPKSSSVG  MA+IDE+   + S   ++ G   +   YPRS+S+A+  R   F
Sbjct:    1 MGKRGQKQNRFLRIVTMPLKVLCKARDLYMRSITGCAARTHYSSAVDAASVPFPRSRSTSSAFSSSASSRRRSSDFTFDDDYSELLRAASVRSLGHKNEIDMIIQQQQQQQQQRQENRVAMGAVTVKGGLPKSSSVGMTMARIDEEDEEEGSVKNQKKGSDFL---YPRSRSHAVTIRGSKF 179          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2783 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TB21_SOYBN3.799e-3249.38Putative uncharacterized protein OS=Glycine max PE... [more]
D7KKM4_ARALY7.432e-2043.04Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9SY56_ARATH1.402e-1840.88At1g10140 OS=Arabidopsis thaliana GN=At1g10140 PE=... [more]
B9R6Y1_RICCO1.831e-1836.99Putative uncharacterized protein OS=Ricinus commun... [more]
Q9C647_ARATH6.956e-1834.62At1g58420 OS=Arabidopsis thaliana GN=At1g58420 PE=... [more]
Q8LF77_ARATH2.643e-1734.07Putative uncharacterized protein OS=Arabidopsis th... [more]
D7KY59_ARALY2.643e-1735.75Putative uncharacterized protein (Fragment) OS=Ara... [more]
B9IBP9_POPTR4.985e-1638.51Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9IBQ0_POPTR4.220e-1541.07Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GNN3_POPTR2.735e-1434.71Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of Cicer_arietinum_v1_Contig2783 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G10140.19.614e-2140.88| Symbols: | Uncharacterised conserved protein UC... [more]
AT1G58420.14.772e-2034.62| Symbols: | Uncharacterised conserved protein UC... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016972Uncharacterised conserved protein UCP031279PIRPIRSF031279Uncharacterised conserved protein, UCP031279 typecoord: 13..176
score: 1.7
NoneNo IPR availableSEGsegsegcoord: 65..84
score
NoneNo IPR availableSEGsegsegcoord: 29..39
score: NAcoord: 40..63
score
NoneNo IPR availableSEGsegsegcoord: 58..74
score
NoneNo IPR availableSEGsegsegcoord: 6..25
score: NAcoord: 50..66
score
NoneNo IPR availableSEGsegsegcoord: 43..79
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2783 ID=Cicer_arietinum_v1_Contig2783; Name=Cicer_arietinum_v1_Contig2783; organism=Cicer arietinum; type=contig; length=678bp
GCGGGGACAACATTCACATTCATAATAATTAGTATGATGAAGAGCAAGGG
ACAGAGCCAGAACACGTTCGTGAGAATCATGTGTTCACCAATAAGAGCAC
TTGGAAAAGCAAGAGATGCTTACGTAAGAAGCATAACAAACTGTGGTCAA
AATATGCATTATGGAAATCCAATGGATGCTGCTGGAAAATTCTCTGCTTT
GTCAAGAAGCCAAAGTGCTGCAACATCAAGAAGATCATCAACAACATCAT
CATTTGGAGATAATAGTGAAGATTTTGCTGAACTTGTTAGAGCTGCTTCA
GCTAGAACTTTGGTTAATAGAATTGACATGGATTTGGTTCTAAAACAACA
ACAATTGAAGAAATCAAATAAAGGGTTGCCTAAGTCAAGTAGTGTTGGAA
TGGCTAAGATTGATGAAGATATGCCTTTTGATTATTCTAGTGTTGAGAAA
AGGGGTGGTGTTGGGATTGTTCATGATTCTTATCCTAGATCTAAAAGTTA
TGCTCTTGGTAATAGGAATGTTGATTTTTGAAAGCCTTTTAGTGTTAGCA
ATATTTTAATTATTATAATTGTAAGAAATTTGGGGATTGAGATTTAATGG
AATTATTATAACCTCTTTCTATTTGAATCTTGTGTTTTGGAATGTATAAT
AAATAATTAATCAATTGTTTTTTGTATG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR016972UCP031279