Cicer_arietinum_v1_Contig2788

Contig Overview


Name	Cicer_arietinum_v1_Contig2788
Unique Name	Cicer_arietinum_v1_Contig2788
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	590

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR395057	EST	GR395057:1..590 +	Cicer arietinum unigene v1	n/a
GR395045	EST	GR395045:1..590 +	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR395057	GR395057	Cicer arietinum	EST
GR395045	GR395045	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. SwissProt
Match: UBC34_ARATH (Ubiquitin-conjugating enzyme E2 34 OS=Arabidopsis thaliana GN=UBC34 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.566e-27
Identity = 67/125 (53.60%), Postives = 81/125 (64.80%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATE--QRETRHDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAKSSLAFNCK   FRK+FPEYVEKYNQQQL+EQ  T+    E+     ++  SEK  D T  D +   GLK+ +++ KQ  P W++LLL S+FGVVMALPLLQL
Sbjct:  115 MMDTSPTTGSVNTTVIEKQRLAKSSLAFNCKTPAFRKLFPEYVEKYNQQQLAEQATTQLTTPESPQKSDTKVESEKTIDPTKGDSE--GGLKERKKNNKQGLPAWIILLLVSVFGVVMALPLLQL 237

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. SwissProt
Match: UBC33_ARATH (Probable ubiquitin-conjugating enzyme E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.355e-26
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQRETRHDK-------SSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAKSSLAFNCK+ TFRK+FPEYVEKY+QQQ++E+ A  Q+ T  +        +++  SEK+     E +++V GLK+ RR+KK+  P W++LLL SI GVVMALPLLQL
Sbjct:  115 MMDNSPTTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYSQQQVAEEEAATQQTTTSENQDFPQKDNAKVESEKSVGLKKESIQEV-GLKERRRNKKEALPGWIVLLLVSIVGVVMALPLLQL 243

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
Match: B7FML7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.360e-42
Identity = 93/127 (73.23%), Postives = 102/127 (80.31%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQ---RETRHDKSSRSVSEKNS-DSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAKSS++FNCKNATFRKMFPEYVEKYN+QQLSEQV +EQ    ET  DKS RSV E N+ +STGEDMK+VEGLKDVRR+KKQ FPTW+MLLLFSIFGVVMALPLLQL
Sbjct:  115 MMDTSPTTGSVNTTTVEKQRLAKSSMSFNCKNATFRKMFPEYVEKYNKQQLSEQVTSEQPASSETGQDKSPRSVLENNNLESTGEDMKRVEGLKDVRRNKKQGFPTWMMLLLFSIFGVVMALPLLQL 241

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
Match: C6TMV6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.652e-39
Identity = 87/125 (69.60%), Postives = 99/125 (79.20%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQ--RETRHDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAKSSL+FNCKNATFRK+FPEYVEKYNQQQLSEQ A E+   +T  DKSSR V EK  +S GEDMK+V+GLK+VR+++K PFPTW+MLLLFSIFGVVMALPLLQL
Sbjct:  115 MMDNSPTTGSVNTTTAEKQRLAKSSLSFNCKNATFRKIFPEYVEKYNQQQLSEQAAPERVSLDTSPDKSSRPVLEKKLESNGEDMKRVDGLKEVRKNRK-PFPTWMMLLLFSIFGVVMALPLLQL 238

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
Match: B9T6E8_RICCO (Ubiquitin-conjugating enzyme E2 j2, putative OS=Ricinus communis GN=RCOM_0333490 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.304e-30
Identity = 74/125 (59.20%), Postives = 89/125 (71.20%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQ--RETRHDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAK+SLAFNCKN TF+K+FPEYVEKYNQQQ SEQ+ ++Q  RE   +  SR   EK  +S+G D+K+ + LKD RR+ KQ FPTW+MLLL S FG+VMALPLLQL
Sbjct:  115 MMDNSPTTGSVNTTAAEKQRLAKASLAFNCKNPTFKKLFPEYVEKYNQQQQSEQIMSDQVSREASREDRSRPTLEKLDNSSG-DVKR-DTLKDARRNGKQTFPTWLMLLLVSAFGIVMALPLLQL 237

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
Match: B9MUK3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589822 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.304e-30
Identity = 68/107 (63.55%), Postives = 85/107 (79.44%), Query Frame = 1

Query:   55 EKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQRETRHDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            +K+RLAK SLAFNCKNA FRK+FPEYVEK++Q+  SEQ+ + Q     +  SR+  EK+ DS+ ED K+V+  KD RR++KQPFPTW+MLLL SIFGVVMALPLLQL
Sbjct:  131 DKRRLAKDSLAFNCKNAAFRKLFPEYVEKHDQELHSEQLVSSQAP--QEDKSRAKLEKHGDSSVEDAKRVDAPKDERRNRKQPFPTWMMLLLVSIFGVVMALPLLQL 235

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
Match: D7TZJ5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016663001 PE=4 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.341e-30
Identity = 72/124 (58.06%), Postives = 89/124 (71.77%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQ-RETRHDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAK+SL+FNCKNATFRKMFPEYVEKYN QQLSEQ  +EQ       + SR + +K  +S  ED+K+VE  KD R++++Q FPTW+++LL SIFG+VMALPLLQL
Sbjct:  183 MMDNSPTTGSVTTTTKEKQRLAKASLSFNCKNATFRKMFPEYVEKYN-QQLSEQSLSEQGSPAPSQEDSRRLLDKVGNSMREDLKRVETPKDTRKNRRQSFPTWMLVLLVSIFGIVMALPLLQL 305

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
Match: B9GY01_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_830711 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.362e-28
Identity = 69/110 (62.73%), Postives = 82/110 (74.55%), Query Frame = 1

Query:   55 EKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQRET---RHDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            EK+ LAK SLAFNCKN  F+K+FPEYVEKY Q+Q + Q+ +EQ  +   R DK  R   EK  DS+ ED K V+  KD RR++KQPFPTW+MLLL SIFGVVMALPLLQL
Sbjct:  122 EKRHLAKDSLAFNCKNTAFKKLFPEYVEKYKQEQHARQLVSEQVSSQVPREDKC-RLKLEKLGDSSVEDAKGVDTPKDARRNRKQPFPTWMMLLLVSIFGVVMALPLLQL 230

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
Match: A9PD75_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.362e-28
Identity = 69/110 (62.73%), Postives = 82/110 (74.55%), Query Frame = 1

Query:   55 EKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQRET---RHDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            EK+ LAK SLAFNCKN  F+K+FPEYVEKY Q+Q + Q+ +EQ  +   R DK  R   EK  DS+ ED K V+  KD RR++KQPFPTW+MLLL SIFGVVMALPLLQL
Sbjct:   59 EKRHLAKDSLAFNCKNTAFKKLFPEYVEKYKQEQHARQLVSEQVSSQVPREDKC-RLKLEKLGDSSVEDAKGVDTPKDARRNRKQPFPTWMMLLLVSIFGVVMALPLLQL 167

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
Match: D7KFD7_ARALY (Ubiquitin-conjugating enzyme 32 OS=Arabidopsis lyrata subsp. lyrata GN=UBC34 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.261e-28
Identity = 70/125 (56.00%), Postives = 84/125 (67.20%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATE--QRETRHDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAKSSLAFNCK   FRK+FPEYVEKYNQQQL+EQ AT+    E+     ++  SEK  D T ED +   GLK+ +++KKQ  P W++LLL S+FGVVMALPLLQL
Sbjct:  115 MMDTSPTTGSVNTTVAEKQRLAKSSLAFNCKTPAFRKLFPEYVEKYNQQQLAEQAATQVTTSESPQKSDTKVESEKTIDPTKEDSE--GGLKERKKNKKQGLPAWIILLLVSVFGVVMALPLLQL 237

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
Match: Q94FU3_SOLLC (Ubiquitin conjugating enzyme 2 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.296e-26
Identity = 67/126 (53.17%), Postives = 87/126 (69.05%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQRETR---HDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EK++LAK+SLAFNCKN TFRK+FPEYVEKY QQQLS Q   EQ  +     DK SR + E++ +S  +++ +V+ LKDV+  +++  PTW++LLL SIFGVVMALPLLQL
Sbjct:  115 MMDNSPTTGSVSTTVAEKKKLAKASLAFNCKNPTFRKLFPEYVEKYEQQQLSSQPVPEQVSSMPAGADK-SRPLLEEHDNSPKDEVNRVKPLKDVKNQQRKSVPTWLLLLLVSIFGVVMALPLLQL 239

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
Match: D7MQ79_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495109 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.887e-26
Identity = 68/127 (53.54%), Postives = 88/127 (69.29%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQRETRHD----KSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQ LAKSSLAFNCKNATFRK+FPEYVEKY+QQQ++E+ A  Q+ T  D    ++++  SEK+     E +++V GLK+ R++KK+  P W++LLL SI GVVMALPLLQL
Sbjct:  115 MMDNSPTTGSVNTSVAEKQGLAKSSLAFNCKNATFRKLFPEYVEKYSQQQVAEEEAATQQTTPEDSPQEENAKIESEKSIGLKKESIQEV-GLKERRKNKKEALPGWIVLLLVSIVGVVMALPLLQL 240

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TAIR peptide
Match: AT1G17280.2 (| Symbols: UBC34 | ubiquitin-conjugating enzyme 34 | chr1:5917146-5919162 REVERSE LENGTH=237)

HSP 1 Score: 121.324 bits (303), Expect = 3.751e-28
Identity = 67/125 (53.60%), Postives = 81/125 (64.80%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATE--QRETRHDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAKSSLAFNCK   FRK+FPEYVEKYNQQQL+EQ  T+    E+     ++  SEK  D T  D +   GLK+ +++ KQ  P W++LLL S+FGVVMALPLLQL
Sbjct:  115 MMDTSPTTGSVNTTVIEKQRLAKSSLAFNCKTPAFRKLFPEYVEKYNQQQLAEQATTQLTTPESPQKSDTKVESEKTIDPTKGDSE--GGLKERKKNNKQGLPAWIILLLVSVFGVVMALPLLQL 237

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TAIR peptide
Match: AT1G17280.1 (| Symbols: UBC34 | ubiquitin-conjugating enzyme 34 | chr1:5917146-5919162 REVERSE LENGTH=237)

HSP 1 Score: 121.324 bits (303), Expect = 3.751e-28
Identity = 67/125 (53.60%), Postives = 81/125 (64.80%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATE--QRETRHDKSSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAKSSLAFNCK   FRK+FPEYVEKYNQQQL+EQ  T+    E+     ++  SEK  D T  D +   GLK+ +++ KQ  P W++LLL S+FGVVMALPLLQL
Sbjct:  115 MMDTSPTTGSVNTTVIEKQRLAKSSLAFNCKTPAFRKLFPEYVEKYNQQQLAEQATTQLTTPESPQKSDTKVESEKTIDPTKGDSE--GGLKERKKNNKQGLPAWIILLLVSVFGVVMALPLLQL 237

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TAIR peptide
Match: AT5G50430.3 (| Symbols: UBC33 | ubiquitin-conjugating enzyme 33 | chr5:20534366-20536307 REVERSE LENGTH=230)

HSP 1 Score: 119.398 bits (298), Expect = 1.425e-27
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQRETRHDK-------SSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAKSSLAFNCK+ TFRK+FPEYVEKY+QQQ++E+ A  Q+ T  +        +++  SEK+     E +++V GLK+ RR+KK+  P W++LLL SI GVVMALPLLQL
Sbjct:  102 MMDNSPTTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYSQQQVAEEEAATQQTTTSENQDFPQKDNAKVESEKSVGLKKESIQEV-GLKERRRNKKEALPGWIVLLLVSIVGVVMALPLLQL 230

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TAIR peptide
Match: AT5G50430.2 (| Symbols: UBC33 | ubiquitin-conjugating enzyme 33 | chr5:20534366-20536307 REVERSE LENGTH=243)

HSP 1 Score: 119.398 bits (298), Expect = 1.425e-27
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQRETRHDK-------SSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAKSSLAFNCK+ TFRK+FPEYVEKY+QQQ++E+ A  Q+ T  +        +++  SEK+     E +++V GLK+ RR+KK+  P W++LLL SI GVVMALPLLQL
Sbjct:  115 MMDNSPTTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYSQQQVAEEEAATQQTTTSENQDFPQKDNAKVESEKSVGLKKESIQEV-GLKERRRNKKEALPGWIVLLLVSIVGVVMALPLLQL 243

[Close]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TAIR peptide
Match: AT5G50430.1 (| Symbols: UBC33 | ubiquitin-conjugating enzyme 33 | chr5:20534366-20536307 REVERSE LENGTH=243)

HSP 1 Score: 119.398 bits (298), Expect = 1.425e-27
Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 1

Query:    7 MMDXXXXXXXXXXXXXEKQRLAKSSLAFNCKNATFRKMFPEYVEKYNQQQLSEQVATEQRETRHDK-------SSRSVSEKNSDSTGEDMKKVEGLKDVRRSKKQPFPTWVMLLLFSIFGVVMALPLLQL 375
            MMD             EKQRLAKSSLAFNCK+ TFRK+FPEYVEKY+QQQ++E+ A  Q+ T  +        +++  SEK+     E +++V GLK+ RR+KK+  P W++LLL SI GVVMALPLLQL
Sbjct:  115 MMDNSPTTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYSQQQVAEEEAATQQTTTSENQDFPQKDNAKVESEKSVGLKKESIQEV-GLKERRRNKKEALPGWIVLLLVSIVGVVMALPLLQL 243

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig2788 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig2788 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig2788 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
UBC34_ARATH	3.566e-27	53.60	Ubiquitin-conjugating enzyme E2 34 OS=Arabidopsis ...	[more]
UBC33_ARATH	1.355e-26	51.54	Probable ubiquitin-conjugating enzyme E2 33 OS=Ara...	[more]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FML7_MEDTR	8.360e-42	73.23	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6TMV6_SOYBN	8.652e-39	69.60	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9T6E8_RICCO	4.304e-30	59.20	Ubiquitin-conjugating enzyme E2 j2, putative OS=Ri...	[more]
B9MUK3_POPTR	4.304e-30	63.55	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TZJ5_VITVI	7.341e-30	58.06	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9GY01_POPTR	2.362e-28	62.73	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PD75_POPTR	2.362e-28	62.73	Putative uncharacterized protein OS=Populus tricho...	[more]
D7KFD7_ARALY	5.261e-28	56.00	Ubiquitin-conjugating enzyme 32 OS=Arabidopsis lyr...	[more]
Q94FU3_SOLLC	1.296e-26	53.17	Ubiquitin conjugating enzyme 2 OS=Solanum lycopers...	[more]
D7MQ79_ARALY	2.887e-26	53.54	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of Cicer_arietinum_v1_Contig2788 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G17280.2	3.751e-28	53.60	\| Symbols: UBC34 \| ubiquitin-conjugating enzyme 34...	[more]
AT1G17280.1	3.751e-28	53.60	\| Symbols: UBC34 \| ubiquitin-conjugating enzyme 34...	[more]
AT5G50430.3	1.425e-27	51.54	\| Symbols: UBC33 \| ubiquitin-conjugating enzyme 33...	[more]
AT5G50430.2	1.425e-27	51.54	\| Symbols: UBC33 \| ubiquitin-conjugating enzyme 33...	[more]
AT5G50430.1	1.425e-27	51.54	\| Symbols: UBC33 \| ubiquitin-conjugating enzyme 33...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 6..18 score
None	No IPR available	SEG	seg	seg	coord: 27..41 score
None	No IPR available	SEG	seg	seg	coord: 4..18 score
None	No IPR available	SEG	seg	seg	coord: 46..61 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig2788 ID=Cicer_arietinum_v1_Contig2788; Name=Cicer_arietinum_v1_Contig2788; organism=Cicer arietinum; type=contig; length=590bp
GCGGGCATGATGGACACTAGTCCAACCACAGGAAGTGTAAACACCACTAC
TGTTGAGAAGCAGCGTCTAGCAAAATCTTCCCTTGCTTTCAATTGTAAGA
ATGCAACATTCAGGAAAATGTTCCCCGAGTATGTGGAGAAATACAACCAG
CAACAGCTTTCTGAGCAAGTTGCTACTGAGCAGCGAGAGACTCGTCATGA
TAAAAGTTCAAGGTCTGTTTCTGAAAAGAATTCAGACTCCACAGGAGAAG
ACATGAAAAAGGTAGAAGGATTGAAGGATGTGAGGAGAAGCAAAAAACAA
CCTTTTCCTACATGGGTGATGCTATTACTCTTCTCCATTTTTGGGGTTGT
TATGGCATTACCTCTACTCCAGCTGTGAATCTTTATGGGTATAAGGGTCC
ATAAAGGGTTTTCCTGGAGCTGGTTCTTTATGTTCTACTTAGGTTTTCTC
ATGTCTAACAAGATTTGTATAGGAAATATTAGACATGGAGGCTGTGTTAA
AAATCTGATTTTACTCCTTTGTGTCTATGTTGTGCCAGTTTCTTGGTATT
GATACTTGTTATGTCATGCTCCTCTTGAAATGTCTAANAN

Search form

Cicer_arietinum_v1_Contig2788