Cicer_arietinum_v1_Contig2790

Contig Overview
NameCicer_arietinum_v1_Contig2790
Unique NameCicer_arietinum_v1_Contig2790
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length663
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
DY475058ESTDY475058:58..312 +Cicer arietinum unigene v1n/a
FE670264ESTFE670264:40..463 -Cicer arietinum unigene v1n/a
HO066803ESTHO066803:72..467 -Cicer arietinum unigene v1n/a
FE673194ESTFE673194:295..524 +Cicer arietinum unigene v1n/a
GR394985ESTGR394985:1..569 +Cicer arietinum unigene v1n/a
FE669738ESTFE669738:19..572 -Cicer arietinum unigene v1n/a
HO067184ESTHO067184:398..663 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
DY475058DY475058Cicer arietinumEST
FE670264FE670264Cicer arietinumEST
HO066803HO066803Cicer arietinumEST
FE673194FE673194Cicer arietinumEST
GR394985GR394985Cicer arietinumEST
FE669738FE669738Cicer arietinumEST
HO067184HO067184Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. SwissProt
Match: CP12_CHLRE (Calvin cycle protein CP12 OS=Chlamydomonas reinhardtii GN=cp12 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.668e-15
Identity = 36/74 (48.65%), Postives = 54/74 (72.97%), Query Frame = 3 
Query:  237 ISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKE----SDPLDEYCKDNPESDECRTYDN 446
            +++KV++++K AE+AC+   TS +C  AWD VEELSAA SH +D  K     +DPL+ +CKD P++DECR Y++
Sbjct:    8 LNKKVQDAVKEAEDACA-KGTSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVYED 80
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TrEMBL
Match: B7FGI5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.938e-54
Identity = 106/126 (84.13%), Postives = 120/126 (95.24%), Query Frame = 3 
Query:   69 GVTLSSPRVLFKGPESLQKSHAIRFGPVFMLSQRRTGSVSSGRILTIRPVRAAPDSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKESDPLDEYCKDNPESDECRTYDN 446
            GV+LSSPRV+FKGPESLQKS AIR GPVFML+QR TG+VSSGR+++IRPV+A+PD I+ KVEESIK+AEEAC+GDATSGECVAAWDEVEELSAAASHARDKKK SDPL+EYCKDNPE+DECRTYDN
Sbjct:    7 GVSLSSPRVIFKGPESLQKSQAIRSGPVFMLNQRWTGAVSSGRMVSIRPVQASPD-ITGKVEESIKSAEEACAGDATSGECVAAWDEVEELSAAASHARDKKKTSDPLEEYCKDNPETDECRTYDN 131
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TrEMBL
Match: B7FML4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.774e-53
Identity = 105/126 (83.33%), Postives = 119/126 (94.44%), Query Frame = 3 
Query:   69 GVTLSSPRVLFKGPESLQKSHAIRFGPVFMLSQRRTGSVSSGRILTIRPVRAAPDSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKESDPLDEYCKDNPESDECRTYDN 446
            GV+LSSPRV+FKGPESLQKS AIR GPVFML+QR TG+VSSGR+++IRPV+A+PD I+ KVEESIK+AEEAC+GDATSGECVAAWDEVEELSAAASHARDKKK SDPL+EY KDNPE+DECRTYDN
Sbjct:    7 GVSLSSPRVIFKGPESLQKSQAIRSGPVFMLNQRWTGAVSSGRMVSIRPVQASPD-ITGKVEESIKSAEEACAGDATSGECVAAWDEVEELSAAASHARDKKKTSDPLEEYRKDNPETDECRTYDN 131
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TrEMBL
Match: C6TF77_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.761e-39
Identity = 83/128 (64.84%), Postives = 103/128 (80.47%), Query Frame = 3 
Query:   69 GVTLSSPRVLFKGPESLQKSHAIRFGPVFMLSQRRTGSVSSGRILTIRPVRAAPDSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHA--RDKKKESDPLDEYCKDNPESDECRTYDN 446
            GV+LSSPR  F    SLQ ++A++F  V +    R GSV  GR++ IRPVRAAP+ ISEKVEESIKNA+EAC+GD TSGECVAAWDEVEELSAAASHA  + K+K+SDPL+ YCKDNPE+ EC+T+++
Sbjct:    6 GVSLSSPRAFFNASPSLQNTYAVKFA-VPLSQGMRLGSVRLGRVMRIRPVRAAPERISEKVEESIKNAQEACAGDPTSGECVAAWDEVEELSAAASHAKYKQKEKDSDPLETYCKDNPETIECKTFED 132
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TrEMBL
Match: B9I9I9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_731703 PE=4 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.665e-38
Identity = 83/128 (64.84%), Postives = 101/128 (78.91%), Query Frame = 3 
Query:   69 GVTLSSPRVLFKGPESLQKSHAIRFGPVFMLSQ--RRTGSVSSGRILTIRPVRAAPDSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKESDPLDEYCKDNPESDECRTYDN 446
            G+ LS+PRVL K  ++ +        P+  L+Q  RR+  + SGR+  +RPVRAAP+ ISEKVE+SIK AEEACSGDA SGEC AAWDEVEELSAAASHA+DKKK SDPL+EYCKDNPE+DECRTY++
Sbjct:    6 GLNLSTPRVLAKATDTPKAQ------PLIKLNQQWRRSYQLGSGRV-QVRPVRAAPEGISEKVEKSIKEAEEACSGDAASGECAAAWDEVEELSAAASHAKDKKKGSDPLEEYCKDNPETDECRTYED 126
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TrEMBL
Match: O24292_PEA (CP12 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.399e-38
Identity = 80/126 (63.49%), Postives = 99/126 (78.57%), Query Frame = 3 
Query:   69 GVTLSSPRVLFKGPESLQKSHAIRFGPVFMLSQRRTGSVSSGRILTIRPVRAAPDSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKESDPLDEYCKDNPESDECRTYDN 446
            G++LS+PR+LF  P   Q    I+      LS R+T    SGR+  ++PVRAAP+ IS+KVEESIK+A+E C+ D  SGECVAAWDEVEELSAAASHARD+KKESDPL++YCKDNPE+DEC+TYDN
Sbjct:    6 GLSLSNPRLLFNSPGFPQ---TIKISSASPLSTRQT-LTGSGRMKIVQPVRAAPEQISKKVEESIKSAQETCADDPVSGECVAAWDEVEELSAAASHARDRKKESDPLEDYCKDNPETDECKTYDN 127
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TrEMBL
Match: B9GSS7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816721 PE=4 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.664e-38
Identity = 81/126 (64.29%), Postives = 97/126 (76.98%), Query Frame = 3 
Query:   69 GVTLSSPRVLFKGPESLQKSHAIRFGPVFMLSQRRTGSVSSGRILTIRPVRAAPDSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKESDPLDEYCKDNPESDECRTYDN 446
            G+ LS+PRVL K  +  +    ++    +    RRT  + SG  + IRPVRAAPDSISEKVE+SIK+AE ACS DA SGEC AAWDEVEELSAAASHA+DKKK SDPL+EYCKDNPE+DECRTY++
Sbjct:    6 GLNLSTPRVLAKATDKPKAQALVKLNQPW----RRTYHLGSGGRMQIRPVRAAPDSISEKVEKSIKDAEAACSDDAASGECAAAWDEVEELSAAASHAKDKKKGSDPLEEYCKDNPETDECRTYED 127
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TrEMBL
Match: A9PIU1_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.664e-38
Identity = 83/128 (64.84%), Postives = 101/128 (78.91%), Query Frame = 3 
Query:   69 GVTLSSPRVLFKGPESLQKSHAIRFGPVFMLSQRRTGS--VSSGRILTIRPVRAAPDSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKESDPLDEYCKDNPESDECRTYDN 446
            G+ LS+PRVL K  ++ +        P+ +  QRR+ S  + SGR+  +RPVRAAP+ ISEKVE+SIK AEEACSGDA SGEC AAWDEVEELSAAASHA+DKKK SDPL+EYCKDNPE+DECRTY++
Sbjct:    6 GLNLSTPRVLAKATDTPKAQP-----PIKLNQQRRSWSYQLGSGRV-QVRPVRAAPEGISEKVEKSIKEAEEACSGDAASGECAAAWDEVEELSAAASHAKDKKKGSDPLEEYCKDNPETDECRTYED 127
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TrEMBL
Match: A9PHK5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.664e-38
Identity = 81/126 (64.29%), Postives = 97/126 (76.98%), Query Frame = 3 
Query:   69 GVTLSSPRVLFKGPESLQKSHAIRFGPVFMLSQRRTGSVSSGRILTIRPVRAAPDSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKESDPLDEYCKDNPESDECRTYDN 446
            G+ LS+PRVL K  +  +    ++    +    RRT  + SG  + IRPVRAAPDSISEKVE+SIK+AE ACS DA SGEC AAWDEVEELSAAASHA+DKKK SDPL+EYCKDNPE+DECRTY++
Sbjct:    6 GLNLSTPRVLAKATDKPKAQALVKLNQPW----RRTYHLGSGGRMQIRPVRAAPDSISEKVEKSIKDAEAACSDDAASGECAAAWDEVEELSAAASHAKDKKKGSDPLEEYCKDNPETDECRTYED 127
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TrEMBL
Match: B7XB92_FAGCR (Chloroplast protein 12 OS=Fagus crenata GN=CP12 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.926e-36
Identity = 79/126 (62.70%), Postives = 98/126 (77.78%), Query Frame = 3 
Query:   69 GVTLSSPRVLFKGPESLQKSHAIRFGPVFMLSQRRTGSVSSGRILTIRPVRAAPDSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKESDPLDEYCKDNPESDECRTYDN 446
            G+ LS+PRVL K  +S  K+  I+   +    +R T    +GR + +RPV AAP+ IS+KV ESIK+AEEAC+GD  SGECVAAWDEVEELSAAASHARDKKK SDPL+EYCKDNPE++ECRTY++
Sbjct:    6 GLNLSTPRVLAKSADS-PKAQTIKSPWLSHSWKRPTLFGYAGRSMQVRPVSAAPEKISDKVAESIKDAEEACAGDPASGECVAAWDEVEELSAAASHARDKKKGSDPLEEYCKDNPETEECRTYED 130
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TrEMBL
Match: B9RNE5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1347170 PE=4 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.167e-33
Identity = 73/126 (57.94%), Postives = 92/126 (73.02%), Query Frame = 3 
Query:   75 TLSSPRVLFKGPESLQKSHAIRFGPVFMLSQ--RRTGSVSSGRILTIRPVRAAPDSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKESDPLDEYCKDNPESDECRTYDN 446
            TL+S  +        + + A +  P+F L+   +R G     + + I+PVRAAPDSISEKVEESIK+A++AC  D  SGECVAAWD VEELSAAASHARDK K+SDPL+ YCKDNPE+DECRTY++
Sbjct:    3 TLTSLNISTPARVIAKATDAPKAQPIFKLNNPWKRAGCQLRSQRMQIKPVRAAPDSISEKVEESIKDAKQACEDDPASGECVAAWDTVEELSAAASHARDKAKDSDPLETYCKDNPETDECRTYED 128
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TAIR peptide
Match: AT3G62410.1 (| Symbols: CP12-2, CP12 | CP12 domain-containing protein 2 | chr3:23091006-23091401 FORWARD LENGTH=131)

HSP 1 Score: 139.043 bits (349), Expect = 2.127e-33
Identity = 67/104 (64.42%), Postives = 85/104 (81.73%), Query Frame = 3 
Query:  144 GPVFMLSQRRTGSVSSGRILTIRPVRAAPDS-ISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKE--SDPLDEYCKDNPESDECRTYDN 446
            GPV + +    GS ++ R++ ++P++AAP+  IS+ VE+SIK A+E C+GD  SGECVAAWDEVEELSAAASHARDKKK   SDPL+EYCKDNPE++ECRTYDN
Sbjct:   28 GPVHLNNSWNLGSRTTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHARDKKKADGSDPLEEYCKDNPETNECRTYDN 131
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TAIR peptide
Match: AT2G47400.1 (| Symbols: CP12-1, CP12 | CP12 domain-containing protein 1 | chr2:19446889-19447263 FORWARD LENGTH=124)

HSP 1 Score: 122.479 bits (306), Expect = 2.061e-28
Identity = 67/128 (52.34%), Postives = 88/128 (68.75%), Query Frame = 3 
Query:   69 GVTLSSPRVLFKGPESLQKSHAIRFGPVFMLSQRRTGSVSSGRILTIRPVRAAPDSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKKE--SDPLDEYCKDNPESDECRTYDN 446
            G+ +++PRV+ +    +        GPV +    + GS+   R++ ++    +   ISEKVE+SI+ A+E C+ D  SGECVAAWDEVEELSAAASHARDKKK   SDPL+EYC DNPE+DECRTYDN
Sbjct:    8 GLNVATPRVVVRPVARV-------LGPVRLNYPWKFGSMK--RMVVVKAT--SEGEISEKVEKSIQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECRTYDN 124
[Close]
BLAST of Cicer_arietinum_v1_Contig2790 vs. TAIR peptide
Match: AT1G76560.1 (| Symbols: CP12-3 | CP12 domain-containing protein 3 | chr1:28728285-28728689 FORWARD LENGTH=134)

HSP 1 Score: 78.9518 bits (193), Expect = 2.613e-15
Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 3 
Query:  231 DSISEKVEESIKNAEEACSGDATSGECVAAWDEVEELSAAASHARDKKK--ESDPLDEYCKDNPESDECRTYDN 446
            + +SE +EE +K A E C  +  S EC  AWDEVEE+S A +  R K K    DPL+ +C++NPE+DECR Y++
Sbjct:   61 EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFCQENPETDECRIYED 134
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2790 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
CP12_CHLRE6.668e-1548.65Calvin cycle protein CP12 OS=Chlamydomonas reinhar... [more]
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BLAST of Cicer_arietinum_v1_Contig2790 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FGI5_MEDTR1.938e-5484.13Putative uncharacterized protein OS=Medicago trunc... [more]
B7FML4_MEDTR4.774e-5383.33Putative uncharacterized protein OS=Medicago trunc... [more]
C6TF77_SOYBN1.761e-3964.84Putative uncharacterized protein OS=Glycine max PE... [more]
B9I9I9_POPTR5.665e-3864.84Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
O24292_PEA7.399e-3863.49CP12 OS=Pisum sativum PE=2 SV=1[more]
B9GSS7_POPTR9.664e-3864.29Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PIU1_9ROSI9.664e-3864.84Putative uncharacterized protein OS=Populus tricho... [more]
A9PHK5_POPTR9.664e-3864.29Putative uncharacterized protein OS=Populus tricho... [more]
B7XB92_FAGCR6.926e-3662.70Chloroplast protein 12 OS=Fagus crenata GN=CP12 PE... [more]
B9RNE5_RICCO7.167e-3357.94Putative uncharacterized protein OS=Ricinus commun... [more]
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BLAST of Cicer_arietinum_v1_Contig2790 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G62410.12.127e-3364.42| Symbols: CP12-2, CP12 | CP12 domain-containing p... [more]
AT2G47400.12.061e-2852.34| Symbols: CP12-1, CP12 | CP12 domain-containing p... [more]
AT1G76560.12.613e-1547.30| Symbols: CP12-3 | CP12 domain-containing protein... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..15
score
NoneNo IPR availableSEGsegsegcoord: 4..9
score: NAcoord: 14..22
score
NoneNo IPR availableSEGsegsegcoord: 39..66
score
NoneNo IPR availableSEGsegsegcoord: 4..44
score
NoneNo IPR availableSEGsegsegcoord: 36..49
score
IPR003823Domain of unknown function CP12PFAMPF02672CP12coord: 79..148
score: 8

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2790 ID=Cicer_arietinum_v1_Contig2790; Name=Cicer_arietinum_v1_Contig2790; organism=Cicer arietinum; type=contig; length=663bp
GATCTTTATTACAACAACAACAACAACAAAAAACCTTAATAGCTGCAACA
ATGGCAGCTACAATGGCTGGTGTTACTCTTTCAAGCCCTAGAGTACTTTT
CAAAGGACCAGAGTCACTTCAAAAGTCTCACGCCATCAGGTTCGGACCGG
TTTTCATGCTAAGCCAAAGGAGAACCGGTTCGGTCAGTTCGGGCAGGATA
CTAACCATCCGACCCGTACGGGCAGCACCGGATAGCATATCTGAGAAAGT
GGAAGAGAGCATAAAGAACGCGGAGGAGGCTTGTTCTGGAGACGCCACTA
GCGGCGAGTGCGTTGCCGCGTGGGATGAGGTGGAGGAACTGAGCGCGGCG
GCGAGCCACGCGAGGGACAAGAAGAAGGAATCGGACCCACTTGATGAATA
CTGCAAAGACAACCCGGAGAGTGATGAATGTCGCACTTATGATAATTGAT
GATACTATTAATATTCTCTCTTTTATTGTACTTTGTATTAATTAATTTTT
ATTTAAGCAAGATTCTATAATTCATACCATCTTTACCACTAAATTTTAGT
CATTATTCTAGCTTCTTCCTATTATTACCTTTGACCTGTTTATGGTTATA
GCTGTTCTACCAAGGAAGGGGTTTAGTGTGTTTAGCTATACAAGTTAGTT
AAATGTTTCGCTG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR003823CP12_dom