Cicer_arietinum_v1_Contig28

Contig Overview
NameCicer_arietinum_v1_Contig28
Unique NameCicer_arietinum_v1_Contig28
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length464
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
HO065352ESTHO065352:62..262 +Cicer arietinum unigene v1n/a
HO066659ESTHO066659:1..464 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
KEGG analysis for Cicer arietinum unigene v12011-01-05
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO065352HO065352Cicer arietinumEST
HO066659HO066659Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TrEMBL
Match: Q0WRL8_ARATH (Putative uncharacterized protein At2g47690 (Fragment) OS=Arabidopsis thaliana GN=At2g47690 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.076e-34
Identity = 65/74 (87.84%), Postives = 71/74 (95.95%), Query Frame = -3 
Query:  229 EKMASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKKG 450
            E+MASGWGI+GNKGRCYDFW+DFSECMS CREPKDC LLREDY ECLHHSKEF+RRNRIYKEEQR+LRAAS+KG
Sbjct:    7 EEMASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAASRKG 80
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TrEMBL
Match: O82238_ARATH (Putative uncharacterized protein At2g47690 OS=Arabidopsis thaliana GN=At2g47690 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.076e-34
Identity = 65/74 (87.84%), Postives = 71/74 (95.95%), Query Frame = -3 
Query:  229 EKMASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKKG 450
            E+MASGWGI+GNKGRCYDFW+DFSECMS CREPKDC LLREDY ECLHHSKEF+RRNRIYKEEQR+LRAAS+KG
Sbjct:   34 EEMASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAASRKG 107
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TrEMBL
Match: Q9LZI6_ARATH (Putative uncharacterized protein At3g62790 OS=Arabidopsis thaliana GN=F26K9_220 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.339e-34
Identity = 64/72 (88.89%), Postives = 69/72 (95.83%), Query Frame = -3 
Query:  229 MASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKKG 444
            MASGWGI+GNKGRCYDFW+DFSECMS CREPKDC LLREDY ECLHHSKEF+RRNRIYKEEQR+LRAAS+KG
Sbjct:    1 MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAASRKG 72
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TrEMBL
Match: Q8L9F7_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.339e-34
Identity = 64/72 (88.89%), Postives = 69/72 (95.83%), Query Frame = -3 
Query:  229 MASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKKG 444
            MASGWGI+GNKGRCYDFW+DFSECMS CREPKDC LLREDY ECLHHSKEF+RRNRIYKEEQR+LRAAS+KG
Sbjct:    1 MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAASRKG 72
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TrEMBL
Match: D7LT98_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486781 PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.339e-34
Identity = 64/72 (88.89%), Postives = 69/72 (95.83%), Query Frame = -3 
Query:  229 MASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKKG 444
            MASGWGI+GNKGRCYDFW+DFSECMS CREPKDC LLREDY ECLHHSKEF+RRNRIYKEEQR+LRAAS+KG
Sbjct:    1 MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAASRKG 72
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TrEMBL
Match: D7LGQ5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_904244 PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.339e-34
Identity = 64/72 (88.89%), Postives = 69/72 (95.83%), Query Frame = -3 
Query:  229 MASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKKG 444
            MASGWGI+GNKGRCYDFW+DFSECMS CREPKDC LLREDY ECLHHSKEF+RRNRIYKEEQR+LRAAS+KG
Sbjct:    1 MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAASRKG 72
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TrEMBL
Match: B9GSA2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644752 PE=4 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.189e-33
Identity = 63/73 (86.30%), Postives = 68/73 (93.15%), Query Frame = -3 
Query:  226 MASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKKGN 444
            MASGWGI+GNKGRCYDFW+DFSECMS CREPKDC  LREDY ECLHHSKEF+RRNRIYKEEQR+LRAASKK +
Sbjct:    1 MASGWGITGNKGRCYDFWIDFSECMSQCREPKDCAFLREDYLECLHHSKEFQRRNRIYKEEQRKLRAASKKAD 73
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TrEMBL
Match: B0LUW2_CAMSI (NADH-ubiquinone oxidoreductase-like protein OS=Camellia sinensis PE=4 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.189e-33
Identity = 62/72 (86.11%), Postives = 68/72 (94.44%), Query Frame = -3 
Query:  229 MASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKKG 444
            MASGWGI+GNKGRCYDFW+DFSECMS CREPKDC  LREDY ECLHHSKEF+RRNR+YKEEQRQLRAA++KG
Sbjct:    1 MASGWGITGNKGRCYDFWMDFSECMSRCREPKDCAFLREDYLECLHHSKEFQRRNRVYKEEQRQLRAAARKG 72
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TrEMBL
Match: Q7X9S6_GOSBA (Fiber protein Fb14 OS=Gossypium barbadense PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.519e-33
Identity = 63/71 (88.73%), Postives = 68/71 (95.77%), Query Frame = -3 
Query:  232 MASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKK 444
            MASGWGI+GNKGRCYDFWVDFSECMS CREPKDC LLREDY ECLHHSKEF+RRNRIYKEEQR+LRAA++K
Sbjct:    1 MASGWGINGNKGRCYDFWVDFSECMSRCREPKDCGLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAARK 71
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TrEMBL
Match: Q4TZT1_GOSHI (Fb14 OS=Gossypium hirsutum PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.519e-33
Identity = 63/71 (88.73%), Postives = 68/71 (95.77%), Query Frame = -3 
Query:  232 MASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKK 444
            MASGWGI+GNKGRCYDFWVDFSECMS CREPKDC LLREDY ECLHHSKEF+RRNRIYKEEQR+LRAA++K
Sbjct:    1 MASGWGINGNKGRCYDFWVDFSECMSRCREPKDCGLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAAARK 71
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TAIR peptide
Match: AT2G47690.1 (| Symbols: | NADH-ubiquinone oxidoreductase-related | chr2:19551263-19552052 FORWARD LENGTH=118)

HSP 1 Score: 149.443 bits (376), Expect = 7.971e-37
Identity = 65/74 (87.84%), Postives = 71/74 (95.95%), Query Frame = -3 
Query:  229 EKMASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKKG 450
            E+MASGWGI+GNKGRCYDFW+DFSECMS CREPKDC LLREDY ECLHHSKEF+RRNRIYKEEQR+LRAAS+KG
Sbjct:   34 EEMASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAASRKG 107
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TAIR peptide
Match: AT3G62790.1 (| Symbols: | NADH-ubiquinone oxidoreductase-related | chr3:23223321-23224221 REVERSE LENGTH=83)

HSP 1 Score: 147.132 bits (370), Expect = 3.956e-36
Identity = 64/72 (88.89%), Postives = 69/72 (95.83%), Query Frame = -3 
Query:  229 MASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKEFRRRNRIYKEEQRQLRAASKKG 444
            MASGWGI+GNKGRCYDFW+DFSECMS CREPKDC LLREDY ECLHHSKEF+RRNRIYKEEQR+LRAAS+KG
Sbjct:    1 MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAASRKG 72
[Close]
BLAST of Cicer_arietinum_v1_Contig28 vs. TAIR peptide
Match: AT2G47690.2 (| Symbols: | NADH-ubiquinone oxidoreductase-related | chr2:19551263-19551991 FORWARD LENGTH=99)

HSP 1 Score: 111.309 bits (277), Expect = 2.406e-25
Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = -3 
Query:  295 EKMASGWGISGNKGRCYDFWVDFSECMSTCREPKDCVLLREDYFECLHHSKE 450
            E+MASGWGI+GNKGRCYDFW+DFSECMS CREPKDC LLREDY ECLHHSKE
Sbjct:   34 EEMASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKE 85
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig28 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q0WRL8_ARATH1.076e-3487.84Putative uncharacterized protein At2g47690 (Fragme... [more]
O82238_ARATH1.076e-3487.84Putative uncharacterized protein At2g47690 OS=Arab... [more]
Q9LZI6_ARATH5.339e-3488.89Putative uncharacterized protein At3g62790 OS=Arab... [more]
Q8L9F7_ARATH5.339e-3488.89Putative uncharacterized protein OS=Arabidopsis th... [more]
D7LT98_ARALY5.339e-3488.89Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7LGQ5_ARALY5.339e-3488.89Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9GSA2_POPTR1.189e-3386.30Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B0LUW2_CAMSI1.189e-3386.11NADH-ubiquinone oxidoreductase-like protein OS=Cam... [more]
Q7X9S6_GOSBA4.519e-3388.73Fiber protein Fb14 OS=Gossypium barbadense PE=4 SV... [more]
Q4TZT1_GOSHI4.519e-3388.73Fb14 OS=Gossypium hirsutum PE=4 SV=1[more]
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BLAST of Cicer_arietinum_v1_Contig28 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G47690.17.971e-3787.84| Symbols: | NADH-ubiquinone oxidoreductase-relat... [more]
AT3G62790.13.956e-3688.89| Symbols: | NADH-ubiquinone oxidoreductase-relat... [more]
AT2G47690.22.406e-2588.46| Symbols: | NADH-ubiquinone oxidoreductase-relat... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019342NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5PFAMPF10200Ndufs5coord: 18..71
score: 2.9

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig28 ID=Cicer_arietinum_v1_Contig28; Name=Cicer_arietinum_v1_Contig28; organism=Cicer arietinum; type=contig; length=464bp
AATTCACTCGGCAAGCTCCACATATAATTTGCAATAGCAAGTTGACCTCC
AAATTATTCCACAGGGAAAAGAAGCCCCATCAAAGTTATAAAAAAAAGGC
TCACACAACTTGTACGAATACCGATCCAAGCGAAATTACAAACATTTTAT
TAAAATACAGAAGCTTAAGTCGACAGATAATTACGAATGTTAATGATGTT
CACTAACAACCCCATCCCCCTCGCTGTTACCTTTCTTGGAAGCAGCTCTT
AGTTGGCGTTGCTCCTCCTTGTAAATCCGGTTTCTTCGTCGGAACTCTTT
GGAATGGTGAAGGCACTCGAAGTAATCTTCACGGAGGAGAACACAGTCTT
TGGGTTCTCTGCAGGTAGACATACACTCGCTGAAGTCGACCCAGAAATCG
TAGCAACGACCTTTGTTTCCAGAGATTCCCCAACCTGACGCCATTTTCTC
GACCCCGCGTACCT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR019342NADH_UbQ_OxRdtase_FeS-su5