Cicer_arietinum_v1_Contig2832

Contig Overview
NameCicer_arietinum_v1_Contig2832
Unique NameCicer_arietinum_v1_Contig2832
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length148
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GO660554ESTGO660554:1..148 +
GO660553ESTGO660553:1..148 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GO660554GO660554Cicer arietinumEST
GO660553GO660553Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig2832 vs. TrEMBL
Match: B9SJ28_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0598020 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.372e-13
Identity = 38/41 (92.68%), Postives = 39/41 (95.12%), Query Frame = 2
Query:   11 QFTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            +FTYSPQANHRKGGLI LAAATVGLT EAAQHLEQIVPPVL
Sbjct:   57 EFTYSPQANHRKGGLIGLAAATVGLTTEAAQHLEQIVPPVL 97          
BLAST of Cicer_arietinum_v1_Contig2832 vs. TrEMBL
Match: C5WSM8_SORBI (Putative uncharacterized protein Sb01g042440 OS=Sorghum bicolor GN=Sb01g042440 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.808e-13
Identity = 36/42 (85.71%), Postives = 39/42 (92.86%), Query Frame = 2
Query:    8 YQFTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            + +TYSPQANHRKGGLI LAA TVGLT+EAAQHLEQIVPPVL
Sbjct:   57 HDYTYSPQANHRKGGLIGLAAVTVGLTSEAAQHLEQIVPPVL 98          
BLAST of Cicer_arietinum_v1_Contig2832 vs. TrEMBL
Match: D7T8L4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011664001 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.517e-12
Identity = 35/41 (85.37%), Postives = 40/41 (97.56%), Query Frame = 2
Query:   11 QFTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            ++T+SPQANHRKGGLI LAAATVGLT+EA+QHLEQIVPPVL
Sbjct:   56 EYTFSPQANHRKGGLIGLAAATVGLTSEASQHLEQIVPPVL 96          
BLAST of Cicer_arietinum_v1_Contig2832 vs. TrEMBL
Match: A5B6J4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014540 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.517e-12
Identity = 35/41 (85.37%), Postives = 40/41 (97.56%), Query Frame = 2
Query:   11 QFTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            ++T+SPQANHRKGGLI LAAATVGLT+EA+QHLEQIVPPVL
Sbjct:   56 EYTFSPQANHRKGGLIGLAAATVGLTSEASQHLEQIVPPVL 96          
BLAST of Cicer_arietinum_v1_Contig2832 vs. TrEMBL
Match: Q8H808_ORYSJ (Putative uncharacterized protein OJ1743A09.20 OS=Oryza sativa subsp. japonica GN=OJ1743A09.20 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.412e-12
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 2
Query:   14 FTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            FT SPQANHRKGGLI LAA TVGLT+EAAQHLEQIVPPVL
Sbjct:   59 FTMSPQANHRKGGLIGLAAVTVGLTSEAAQHLEQIVPPVL 98          
BLAST of Cicer_arietinum_v1_Contig2832 vs. TrEMBL
Match: Q10PS3_ORYSJ (HEAT repeat family protein, expressed OS=Oryza sativa subsp. japonica GN=Os03g0223700 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.412e-12
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 2
Query:   14 FTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            FT SPQANHRKGGLI LAA TVGLT+EAAQHLEQIVPPVL
Sbjct:   59 FTMSPQANHRKGGLIGLAAVTVGLTSEAAQHLEQIVPPVL 98          
BLAST of Cicer_arietinum_v1_Contig2832 vs. TrEMBL
Match: B8AJN4_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10576 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.412e-12
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 2
Query:   14 FTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            FT SPQANHRKGGLI LAA TVGLT+EAAQHLEQIVPPVL
Sbjct:   59 FTMSPQANHRKGGLIGLAAVTVGLTSEAAQHLEQIVPPVL 98          
BLAST of Cicer_arietinum_v1_Contig2832 vs. TrEMBL
Match: A9SUY3_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_135685 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.372e-11
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 2
Query:   14 FTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            F  SPQANHRKGGLI LAAATVGL +EAAQHLE+IVPPVL
Sbjct:   58 FALSPQANHRKGGLIGLAAATVGLASEAAQHLEKIVPPVL 97          
BLAST of Cicer_arietinum_v1_Contig2832 vs. TrEMBL
Match: B9HJG4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_766186 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.322e-11
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 2
Query:   11 QFTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            +FT S QANHRKGGLI LAAATVGLT++AAQHL QIVPPVL
Sbjct:   55 EFTASAQANHRKGGLIGLAAATVGLTSDAAQHLSQIVPPVL 95          
BLAST of Cicer_arietinum_v1_Contig2832 vs. TrEMBL
Match: A9PFZ0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.322e-11
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 2
Query:   11 QFTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            +FT S QANHRKGGLI LAAATVGLT++AAQHL QIVPPVL
Sbjct:   55 EFTASAQANHRKGGLIGLAAATVGLTSDAAQHLSQIVPPVL 95          
BLAST of Cicer_arietinum_v1_Contig2832 vs. TAIR peptide
Match: AT2G01690.2 (| Symbols: | ARM repeat superfamily protein | chr2:309144-313499 REVERSE LENGTH=744)

HSP 1 Score: 67.781 bits (164), Expect = 1.557e-12
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 2
Query:   11 QFTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            +F  SPQANHRKGGLI LAA TVGL+ EAAQ+LEQIVPPV+
Sbjct:   57 EFAKSPQANHRKGGLIGLAAVTVGLSTEAAQYLEQIVPPVI 97          
BLAST of Cicer_arietinum_v1_Contig2832 vs. TAIR peptide
Match: AT2G01690.1 (| Symbols: | ARM repeat superfamily protein | chr2:309144-313499 REVERSE LENGTH=743)

HSP 1 Score: 67.781 bits (164), Expect = 1.557e-12
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 2
Query:   11 QFTYSPQANHRKGGLISLAAATVGLTNEAAQHLEQIVPPVL 133
            +F  SPQANHRKGGLI LAA TVGL+ EAAQ+LEQIVPPV+
Sbjct:   57 EFAKSPQANHRKGGLIGLAAVTVGLSTEAAQYLEQIVPPVI 97          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2832 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SJ28_RICCO1.372e-1392.68Putative uncharacterized protein OS=Ricinus commun... [more]
C5WSM8_SORBI6.808e-1385.71Putative uncharacterized protein Sb01g042440 OS=So... [more]
D7T8L4_VITVI1.517e-1285.37Whole genome shotgun sequence of line PN40024, sca... [more]
A5B6J4_VITVI1.517e-1285.37Putative uncharacterized protein OS=Vitis vinifera... [more]
Q8H808_ORYSJ4.412e-1290.00Putative uncharacterized protein OJ1743A09.20 OS=O... [more]
Q10PS3_ORYSJ4.412e-1290.00HEAT repeat family protein, expressed OS=Oryza sat... [more]
B8AJN4_ORYSI4.412e-1290.00Putative uncharacterized protein OS=Oryza sativa s... [more]
A9SUY3_PHYPA6.372e-1185.00Predicted protein OS=Physcomitrella patens subsp. ... [more]
B9HJG4_POPTR8.322e-1182.93Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PFZ0_POPTR8.322e-1182.93Putative uncharacterized protein OS=Populus tricho... [more]
back to top
BLAST of Cicer_arietinum_v1_Contig2832 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G01690.21.557e-1278.05| Symbols: | ARM repeat superfamily protein | chr... [more]
AT2G01690.11.557e-1278.05| Symbols: | ARM repeat superfamily protein | chr... [more]
back to top
Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2832 ID=Cicer_arietinum_v1_Contig2832; Name=Cicer_arietinum_v1_Contig2832; organism=Cicer arietinum; type=contig; length=148bp
GACTGCGTACCAATTCACTTATTCACCACAAGCAAATCATCGCAAGGGAG
GGTTGATAAGCTTAGCTGCTGCTACTGTTGGGTTGACTAATGAAGCTGCT
CAGCATCTCGAGCAAATTGTGCCTCCTGTGTTACTCAGGACTCATCAA
back to top