Cicer_arietinum_v1_Contig2847

Contig Overview
NameCicer_arietinum_v1_Contig2847
Unique NameCicer_arietinum_v1_Contig2847
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length987
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
HO214267ESTHO214267:387..576 +
GR915279ESTGR915279:215..619 +
HO063070ESTHO063070:291..606 +
FL512363ESTFL512363:1..688 -
GR912316ESTGR912316:231..714 -
HO063109ESTHO063109:248..676 +
GR916243ESTGR916243:221..714 -
GR916686ESTGR916686:291..714 -
HO067614ESTHO067614:269..782 -
GR407788ESTGR407788:286..890 +
FE670510ESTFE670510:475..990 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO214267HO214267Cicer arietinumEST
GR915279GR915279Cicer arietinumEST
HO063070HO063070Cicer arietinumEST
FL512363FL512363Cicer arietinumEST
GR912316GR912316Cicer arietinumEST
HO063109HO063109Cicer arietinumEST
GR916243GR916243Cicer arietinumEST
GR916686GR916686Cicer arietinumEST
HO067614HO067614Cicer arietinumEST
GR407788GR407788Cicer arietinumEST
FE670510FE670510Cicer arietinumEST


Homology
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BLAST of Cicer_arietinum_v1_Contig2847 vs. TrEMBL
Match: B9SC19_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0701560 PE=4 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.695e-7
Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = -1 
Query:  754 PAVNLLMGQVKILKRGDKLSSENIHD-GKLVVPVEDCKVMTMDLDHPDLLLGSTDRFGPDPITVQKQVRVS 963
            P+ N +MG+VKILKRG+ L+  +     K         +M ++ D PDL+LGSTDR GPDP TVQ+Q+R+S
Sbjct:   55 PSRNFVMGEVKILKRGESLAKVDKRGLSKKEKRKHPTMIMKIEKD-PDLILGSTDRLGPDPETVQEQIRLS 124
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2847 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
B9SC19_RICCO1.695e-747.89Putative uncharacterized protein OS=Ricinus commun... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 8..21
score
NoneNo IPR availableSEGsegsegcoord: 78..96
score
NoneNo IPR availableSEGsegsegcoord: 69..80
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2847 ID=Cicer_arietinum_v1_Contig2847; Name=Cicer_arietinum_v1_Contig2847; organism=Cicer arietinum; type=contig; length=987bp
TTAAGGCTTACCGGGTTAGGTATGTTCCGGGGAAATTGTGAGCGGGAAAA
CAATTTCCACCCAGGATAAAAGCTATGGACCCAGGAATAAAGGCCAAGGC
TATTTAGGTGAACACTATTGGAATTGCTCCAAGGTTATGCATTCCAAAGC
GGTGGGGAGGTCTCCCCATAAGGCCGGACCTTGCAGGGCGGCCGGGGAAT
TCACTAGTGAATTAGCGTGGTTCGCGGCCGAAGGTACTTAATTCTTCCAT
ATGGAAAAAAATCACACACACTACACAAAGAAATACTCTAAATCCAAACA
CTATAGATTCACGTATATCAGACTAGAGGAAATTACAAAAGTTACATCCC
TTCGGTCATCAACGTATGAACTAACCACAAAACCTAACTTGATTATTTCT
TCTATCACGAACTGAACACTGAAACAACAAACCTTCACTTGACTTTCAAC
TTTCAACGCTTCTTCATGCGTTCGCACCCTACGGCAAATCCTCTTGAAAA
AATAAAGGATGCACGTTAGGGACCATACGAACAAACAGACAAACAACCAC
CAATTTTCATCGTCTACTTCGGAAGAAAGTAATCAAAACACCTAACAAAC
GAAATCAATTAATCATTCCAAATCAAGTCGTAGTATCCGTCTCAAATCAC
TTGTGGCCACACCGTTTTTCCCCAAAAATCCGGGTACAGGAACGGAACTC
GGAGGAGGAGACGCAACAAACGCTGATCCAGCGTAAATTCCATCTTTCGA
ATCGGAAACCCTAACTTGTTTCTGTACGGTTATTGGATCAGGCCCAAACC
GATCCGTTGAGCCCAATAACAAATCGGGATGGTCAAGGTCCATAGTCATC
ACCTTACAATCCTCCACGGGAACAACGAGTTTTCCATCGTGGATATTCTC
TGAACTCAACTTGTCGCCTCTTTTGAGAATCTTAACTTGTCCCATTAAAA
GATTCACCGCGGGCTACACCGTTCGACAGCGTCTCCG
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