Cicer_arietinum_v1_Contig2853

Contig Overview


Name	Cicer_arietinum_v1_Contig2853
Unique Name	Cicer_arietinum_v1_Contig2853
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	700

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR392255	EST	GR392255:16..353 +	Cicer arietinum unigene v1	n/a
FL518961	EST	FL518961:1..700 +	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR392255	GR392255	Cicer arietinum	EST
FL518961	FL518961	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
Match: RS14_LUPLU (40S ribosomal protein S14 OS=Lupinus luteus GN=RPS14 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.191e-47
Identity = 82/87 (94.25%), Postives = 83/87 (95.40%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            SRRKVR+ KEETVTLGPAV DGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCK  G
Sbjct:    2 SRRKVRDTKEETVTLGPAVSDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKELG 88

HSP 2 Score: 48.1358 bits (113), Expect = 1.191e-47
Identity = 31/66 (46.97%), Postives = 33/66 (50.00%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                                DVTPIPSDSTRRKSGRRG +
Sbjct:   85 KELGITALHIKLRATGGNKTKTPGRGAQSALRALAR-SGMKIGRIEDVTPIPSDSTRRKSGRRGRR 149

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
Match: RS142_MAIZE (40S ribosomal protein S14 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.147e-43
Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 3

Query:   81 MSSRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            MS R+K REPKEE V LGPAV++GEHVFGVA IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLA+QDVA RCK  G
Sbjct:    1 MSGRKKTREPKEENV-LGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCKELG 88

HSP 2 Score: 45.0542 bits (105), Expect = 2.147e-43
Identity = 28/66 (42.42%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                                DVTP+P+DSTRRK GRRG +
Sbjct:   85 KELGITALHIKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTPVPTDSTRRKGGRRGRR 149

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
Match: RS142_ARATH (40S ribosomal protein S14-2 OS=Arabidopsis thaliana GN=RPS14B PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.370e-42
Identity = 74/87 (85.06%), Postives = 79/87 (90.80%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            S+RK +EPK ETVTLGP+V++GE VFGV  IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    2 SKRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 88

HSP 2 Score: 44.2838 bits (103), Expect = 1.370e-42
Identity = 27/66 (40.91%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITA+H+KLRA                                DVTPIP+DSTRRK GRRG +
Sbjct:   85 KELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTPIPTDSTRRKGGRRGRR 149

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
Match: RS143_ARATH (40S ribosomal protein S14-3 OS=Arabidopsis thaliana GN=RPS14C PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 3.031e-42
Identity = 73/87 (83.91%), Postives = 78/87 (89.66%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            S+RK +EPK E VTLGPAV++GE VFGV  +FASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    2 SKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 88

HSP 2 Score: 44.2838 bits (103), Expect = 3.031e-42
Identity = 27/66 (40.91%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITA+H+KLRA                                DVTPIP+DSTRRK GRRG +
Sbjct:   85 KELGITAIHVKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTPIPTDSTRRKGGRRGRR 149

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
Match: RS141_MAIZE (40S ribosomal protein S14 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.148e-42
Identity = 76/87 (87.36%), Postives = 78/87 (89.66%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            SRRK REPKEE V LGP V++GE VFGVA IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    2 SRRKTREPKEENV-LGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 87

HSP 2 Score: 45.0542 bits (105), Expect = 5.148e-42
Identity = 28/66 (42.42%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                                DVTP+P+DSTRRK GRRG +
Sbjct:   84 KELGITALHIKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTPVPTDSTRRKGGRRGRR 148

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
Match: RS141_ARATH (40S ribosomal protein S14-1 OS=Arabidopsis thaliana GN=RPS14A PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.139e-41
Identity = 72/87 (82.76%), Postives = 78/87 (89.66%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            S+RK +EPK + VTLGP+V++GE VFGV  IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    2 SKRKTKEPKVDVVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 88

HSP 2 Score: 44.2838 bits (103), Expect = 1.139e-41
Identity = 27/66 (40.91%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITA+H+KLRA                                DVTPIP+DSTRRK GRRG +
Sbjct:   85 KELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTPIPTDSTRRKGGRRGRR 149

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
Match: RS14_CHLRE (40S ribosomal protein S14 OS=Chlamydomonas reinhardtii GN=RPS14 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.448e-38
Identity = 64/81 (79.01%), Postives = 72/81 (88.89%), Query Frame = 3

Query:  105 EPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            E  +E V+LGP V++GEHVFGVA IFASFNDTF+HVTDLSGRET+ R+TGGMKVKADRDESSPYAAMLAAQDVA +CK  G
Sbjct:   11 EAPKEVVSLGPTVREGEHVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAQKCKELG 91

HSP 2 Score: 45.4394 bits (106), Expect = 2.448e-38
Identity = 29/66 (43.94%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                                DVTPIP+DSTRRK GRRG +
Sbjct:   88 KELGITALHIKLRATGGNRTKTPGPGAQSALRALAR-AGMKIGRIEDVTPIPTDSTRRKGGRRGRR 152

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
Match: RS14_PODCA (40S ribosomal protein S14 OS=Podocoryne carnea GN=RPS14 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.190e-38
Identity = 68/86 (79.07%), Postives = 75/86 (87.21%), Query Frame = 3

Query:   93 RKVREPKEETV-TLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            RK + PKEE V +LGP V DGE+VFGVA IFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    4 RKGKAPKEEQVISLGPQVADGENVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAVRCKEIG 89

HSP 2 Score: 43.5134 bits (101), Expect = 3.190e-38
Identity = 27/66 (40.91%), Postives = 31/66 (46.97%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +E+GITALH+KLRA                                DVTPIPSD TRRK GRRG +
Sbjct:   86 KEIGITALHVKLRATGGNRTKTPGPGAQSALRALAR-SGMKIGRIEDVTPIPSDCTRRKGGRRGRR 150

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
Match: RS14_MOUSE (40S ribosomal protein S14 OS=Mus musculus GN=Rps14 PE=2 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 9.191e-38
Identity = 66/86 (76.74%), Postives = 74/86 (86.05%), Query Frame = 3

Query:   93 RKVREPKEETV-TLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            RK +E KEE V +LGP V +GE+VFGV  IFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    4 RKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 89

HSP 2 Score: 46.595 bits (109), Expect = 9.191e-38
Identity = 30/66 (45.45%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                                DVTPIPSDSTRRK GRRG +
Sbjct:   86 KELGITALHIKLRATGGNRTKTPGPGAQSALRALAR-SGMKIGRIEDVTPIPSDSTRRKGGRRGRR 150

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
Match: RS14_HUMAN (40S ribosomal protein S14 OS=Homo sapiens GN=RPS14 PE=1 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 9.191e-38
Identity = 66/86 (76.74%), Postives = 74/86 (86.05%), Query Frame = 3

Query:   93 RKVREPKEETV-TLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            RK +E KEE V +LGP V +GE+VFGV  IFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    4 RKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 89

HSP 2 Score: 46.595 bits (109), Expect = 9.191e-38
Identity = 30/66 (45.45%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                                DVTPIPSDSTRRK GRRG +
Sbjct:   86 KELGITALHIKLRATGGNRTKTPGPGAQSALRALAR-SGMKIGRIEDVTPIPSDSTRRKGGRRGRR 150

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
Match: B7FGP1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.311e-48
Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 3

Query:   81 MSSRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            MSS+RKVREPKEETVTLGPAVKDGE VFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCK  G
Sbjct:    1 MSSKRKVREPKEETVTLGPAVKDGEQVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKELG 89

HSP 2 Score: 48.1358 bits (113), Expect = 4.311e-48
Identity = 31/66 (46.97%), Postives = 33/66 (50.00%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                                DVTPIPSDSTRRKSGRRG +
Sbjct:   86 KELGITALHIKLRATGGNKTKTPGPGAQAALRALAR-SGMKIGRIEDVTPIPSDSTRRKSGRRGRR 150

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
Match: B7FGG2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.325e-48
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 3

Query:   81 MSSRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            MSS+R+VREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSG ETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCK  G
Sbjct:    1 MSSKRRVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGGETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKELG 89

HSP 2 Score: 48.1358 bits (113), Expect = 7.325e-48
Identity = 31/66 (46.97%), Postives = 33/66 (50.00%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                                DVTPIPSDSTRRKSGRRG +
Sbjct:   86 KELGITALHIKLRATGGNKTKTPGPGAQAALRALAR-SGMKVGRIEDVTPIPSDSTRRKSGRRGRR 150

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
Match: C6SV94_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.957e-47
Identity = 82/87 (94.25%), Postives = 83/87 (95.40%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            SRRKVREPKEE VTLGPAV+DGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    2 SRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAARCKELG 88

HSP 2 Score: 48.1358 bits (113), Expect = 7.957e-47
Identity = 31/66 (46.97%), Postives = 33/66 (50.00%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                                DVTPIPSDSTRRKSGRRG +
Sbjct:   85 KELGITALHIKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTPIPSDSTRRKSGRRGRR 149

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
Match: C6SZX2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.901e-46
Identity = 82/87 (94.25%), Postives = 83/87 (95.40%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            SRRKVREPKEE VTLGPAV+DGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    2 SRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAARCKELG 88

HSP 2 Score: 45.8246 bits (107), Expect = 3.901e-46
Identity = 29/66 (43.94%), Postives = 33/66 (50.00%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHI+LRA                                DVTPIPSDSTR+KSGRRG +
Sbjct:   85 KELGITALHIRLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTPIPSDSTRKKSGRRGRR 149

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
Match: D7TK38_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021436001 PE=4 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 5.365e-45
Identity = 80/87 (91.95%), Postives = 81/87 (93.10%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            SRRKVREPKEE VTLGP V+DGEHVFGVA IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:  541 SRRKVREPKEENVTLGPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 627

HSP 2 Score: 45.8246 bits (107), Expect = 5.365e-45
Identity = 31/67 (46.27%), Postives = 35/67 (52.24%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENR-DA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                       R+  R     DVTPIP+DSTRRK GRRG +
Sbjct:  624 KELGITALHIKLRATGGNKTKTPGPGAQSALRALA--RSGMRIGRIEDVTPIPTDSTRRKGGRRGRR 688

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
Match: A9PDW2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_813794 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.221e-44
Identity = 78/89 (87.64%), Postives = 81/89 (91.01%), Query Frame = 3

Query:   81 MSSRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            MSSRRK REPKEE VTLGP V++GEH FGVA IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV+ RCK  G
Sbjct:    1 MSSRRKTREPKEENVTLGPTVREGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELG 89

HSP 2 Score: 46.9802 bits (110), Expect = 1.221e-44
Identity = 32/71 (45.07%), Postives = 36/71 (50.70%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*R-----DVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                       R  +R   R     DVTPIP+DSTRRK GRRG +
Sbjct:   86 KELGITALHIKLRATGGNKTKTPGPGAQSA------LRALSRSGMRIGRIEDVTPIPTDSTRRKGGRRGRR 150

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
Match: D7TCS4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_80.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036096001 PE=4 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.576e-44
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            SRRKVREPKEE VTLGP V+DGEHVFGVA IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV+ RCK  G
Sbjct:   43 SRRKVREPKEENVTLGPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELG 129

HSP 2 Score: 45.4394 bits (106), Expect = 1.576e-44
Identity = 30/67 (44.78%), Postives = 35/67 (52.24%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENR-DA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELG+TALHIKLRA                       R+  R     DVTPIP+DSTRRK GRRG +
Sbjct:  126 KELGVTALHIKLRATGGNKTKTPGPGAQSALRALA--RSGMRIGRIEDVTPIPTDSTRRKGGRRGRR 190

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
Match: D7TJ97_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033877001 PE=4 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.584e-44
Identity = 79/87 (90.80%), Postives = 80/87 (91.95%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            SRRKVREPKEE VTLGP V+DGEH FGVA IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:   15 SRRKVREPKEENVTLGPTVRDGEHAFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 101

HSP 2 Score: 45.8246 bits (107), Expect = 1.584e-44
Identity = 31/67 (46.27%), Postives = 35/67 (52.24%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENR-DA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                       R+  R     DVTPIP+DSTRRK GRRG +
Sbjct:   98 KELGITALHIKLRATGGNKTKTPGPGAQSALRALA--RSGMRIGRIEDVTPIPTDSTRRKGGRRGRR 162

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
Match: A5AX94_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018475 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.592e-44
Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            SRRKVREPKEE VTLGP V+DGEHVFGVA IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV+ RCK  G
Sbjct:    2 SRRKVREPKEENVTLGPTVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELG 88

HSP 2 Score: 45.4394 bits (106), Expect = 1.592e-44
Identity = 30/67 (44.78%), Postives = 35/67 (52.24%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENR-DA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELG+TALHIKLRA                       R+  R     DVTPIP+DSTRRK GRRG +
Sbjct:   85 KELGVTALHIKLRATGGNKTKTPGPGAQSALRALA--RSGMRIGRIEDVTPIPTDSTRRKGGRRGRR 149

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
Match: B4FKA4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.522e-44
Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 3

Query:   81 MSSRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            MS R+K REPKEE VTLGPAV++GEHVFGVA IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLA+QDVA RCK  G
Sbjct:    1 MSGRKKTREPKEENVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCKELG 89

HSP 2 Score: 45.0542 bits (105), Expect = 3.522e-44
Identity = 28/66 (42.42%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITALHIKLRA                                DVTP+P+DSTRRK GRRG +
Sbjct:   86 KELGITALHIKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTPVPTDSTRRKGGRRGRR 150

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TAIR peptide
Match: AT3G11510.1 (| Symbols: | Ribosomal protein S11 family protein | chr3:3623757-3624866 REVERSE LENGTH=150)

HSP 1 Score: 150.214 bits (378), Expect = 1.373e-43
Identity = 74/87 (85.06%), Postives = 79/87 (90.80%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            S+RK +EPK ETVTLGP+V++GE VFGV  IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    2 SKRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 88

HSP 2 Score: 44.2838 bits (103), Expect = 1.373e-43
Identity = 27/66 (40.91%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITA+H+KLRA                                DVTPIP+DSTRRK GRRG +
Sbjct:   85 KELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTPIPTDSTRRKGGRRGRR 149

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TAIR peptide
Match: AT3G52580.1 (| Symbols: | Ribosomal protein S11 family protein | chr3:19503324-19504701 FORWARD LENGTH=150)

HSP 1 Score: 149.058 bits (375), Expect = 3.037e-43
Identity = 73/87 (83.91%), Postives = 78/87 (89.66%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            S+RK +EPK E VTLGPAV++GE VFGV  +FASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    2 SKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 88

HSP 2 Score: 44.2838 bits (103), Expect = 3.037e-43
Identity = 27/66 (40.91%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITA+H+KLRA                                DVTPIP+DSTRRK GRRG +
Sbjct:   85 KELGITAIHVKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTPIPTDSTRRKGGRRGRR 149

[Close]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TAIR peptide
Match: AT2G36160.1 (| Symbols: | Ribosomal protein S11 family protein | chr2:15169925-15171159 FORWARD LENGTH=150)

HSP 1 Score: 147.132 bits (370), Expect = 1.141e-42
Identity = 72/87 (82.76%), Postives = 78/87 (89.66%), Query Frame = 3

Query:   87 SRRKVREPKEETVTLGPAVKDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKGTG 347
            S+RK +EPK + VTLGP+V++GE VFGV  IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVA RCK  G
Sbjct:    2 SKRKTKEPKVDVVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 88

HSP 2 Score: 44.2838 bits (103), Expect = 1.141e-42
Identity = 27/66 (40.91%), Postives = 32/66 (48.48%), Query Frame = 1

Query:  337 RELGITALHIKLRAXXXXXXXXXXXXXXXXXXXXXXFRNENRDA*RDVTPIPSDSTRRKSGRRGNK 534
            +ELGITA+H+KLRA                                DVTPIP+DSTRRK GRRG +
Sbjct:   85 KELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTPIPTDSTRRKGGRRGRR 149

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig2853 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig2853 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS14_LUPLU	1.191e-47	94.25	40S ribosomal protein S14 OS=Lupinus luteus GN=RPS...	[more]
RS142_MAIZE	2.147e-43	86.52	40S ribosomal protein S14 OS=Zea mays PE=3 SV=1	[more]
RS142_ARATH	1.370e-42	85.06	40S ribosomal protein S14-2 OS=Arabidopsis thalian...	[more]
RS143_ARATH	3.031e-42	83.91	40S ribosomal protein S14-3 OS=Arabidopsis thalian...	[more]
RS141_MAIZE	5.148e-42	87.36	40S ribosomal protein S14 OS=Zea mays PE=3 SV=1	[more]
RS141_ARATH	1.139e-41	82.76	40S ribosomal protein S14-1 OS=Arabidopsis thalian...	[more]
RS14_CHLRE	2.448e-38	79.01	40S ribosomal protein S14 OS=Chlamydomonas reinhar...	[more]
RS14_PODCA	3.190e-38	79.07	40S ribosomal protein S14 OS=Podocoryne carnea GN=...	[more]
RS14_MOUSE	9.191e-38	76.74	40S ribosomal protein S14 OS=Mus musculus GN=Rps14...	[more]
RS14_HUMAN	9.191e-38	76.74	40S ribosomal protein S14 OS=Homo sapiens GN=RPS14...	[more]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FGP1_MEDTR	4.311e-48	95.51	Putative uncharacterized protein OS=Medicago trunc...	[more]
B7FGG2_MEDTR	7.325e-48	94.38	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SV94_SOYBN	7.957e-47	94.25	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SZX2_SOYBN	3.901e-46	94.25	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7TK38_VITVI	5.365e-45	91.95	Whole genome shotgun sequence of line PN40024, sca...	[more]
A9PDW2_POPTR	1.221e-44	87.64	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TCS4_VITVI	1.576e-44	90.80	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7TJ97_VITVI	1.584e-44	90.80	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AX94_VITVI	1.592e-44	90.80	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B4FKA4_MAIZE	3.522e-44	87.64	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of Cicer_arietinum_v1_Contig2853 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT3G11510.1	1.373e-43	85.06	\| Symbols: \| Ribosomal protein S11 family protein...	[more]
AT3G52580.1	3.037e-43	83.91	\| Symbols: \| Ribosomal protein S11 family protein...	[more]
AT2G36160.1	1.141e-42	82.76	\| Symbols: \| Ribosomal protein S11 family protein...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 40..61 score
None	No IPR available	PANTHER	PTHR11759:SF1	40S RIBOSOMAL PROTEIN S14	coord: 44..60 score: 1.4
None	No IPR available	SEG	seg	seg	coord: 45..54 score
None	No IPR available	PANTHER	PTHR11759:SF1	40S RIBOSOMAL PROTEIN S14	coord: 23..95 score: 9.1
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 29..95 score: 3.7
None	No IPR available	SEG	seg	seg	coord: 35..48 score
None	No IPR available	SEG	seg	seg	coord: 11..22 score
None	No IPR available	SEG	seg	seg	coord: 6..14 score: NAcoord: 46..57 score
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 44..60 score: 1.4
IPR001971	Ribosomal protein S11	GENE3D	3.30.420.80	no description	coord: 30..95 score: 3.3
IPR001971	Ribosomal protein S11	PIR	PIRSF002131	Ribosomal protein, S11p/S11a/S14e/organellar S11 types	coord: 7..128 score: 3.1
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 23..95 score: 9.1
IPR001971	Ribosomal protein S11	PFAM	PF00411	Ribosomal_S11	coord: 35..95 score: 6.2

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig2853 ID=Cicer_arietinum_v1_Contig2853; Name=Cicer_arietinum_v1_Contig2853; organism=Cicer arietinum; type=contig; length=700bp
AATCAGTGTGCTCGCTGAAGAAGAAGCTCTACGCCGTCGAACCGAAGCAG
GCATCGTCCTAGAACCCTAGAGCTTCAACAATGTCGTCGAGGAGAAAGGT
TAGAGAGCCAAAGGAAGAAACTGTGACTCTTGGTCCTGCTGTTAAGGACG
GTGAACATGTTTTTGGTGTTGCTCGTATCTTTGCTTCATTCAACGACACC
TTCATTCATGTCACTGACTTGTCTGGAAGGGAAACCCTTGTCCGCATTAC
TGGTGGAATGAAGGTTAAAGCTGACAGAGATGAGTCTTCTCCATATGCTG
CTATGCTTGCAGCACAAGATGTTGCTACCAGATGCAAGGGAACTGGGCAT
TACTGCTCTTCATATCAAGCTCCGTGCAACTGGTGGGAACAAGACAAAAA
CACCAGGACCTGGGTGCTCAGGCTGCTCTCCGTGCCTTGGCTCGTTCAGG
AATGAAAATCGGGACGCATAGAGGGATGTGACCCCAATTCCATCCGACAG
CACTCGTAGAAAGAGTGGTAGAAGGGGTAATAAGGCTCTGGAGTTTGGCT
ATTTGCATTATGGATGGAGCTCCTTTTGCTTTTATTTTTTGTTGCCTTGT
TTTGCTTCTTTTCAAAACTGTATCGTGGTTTATTCCATATTTAACCTAAG
AAGGTGTTTTGCACCATAAATTGGATTTCTTGAGTTTCCTTGGGGCAACA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001971	Ribosomal_uS11

Search form

Cicer_arietinum_v1_Contig2853