Cicer_arietinum_v1_Contig2867

Contig Overview
NameCicer_arietinum_v1_Contig2867
Unique NameCicer_arietinum_v1_Contig2867
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length525
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FD449537ESTFD449537:1..251 +
GR403390ESTGR403390:41..350 +
GR407559ESTGR407559:41..526 +
GR406701ESTGR406701:402..503 -
GR406354ESTGR406354:208..524 -
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FD449537FD449537Cicer arietinumEST
GR403390GR403390Cicer arietinumEST
GR407559GR407559Cicer arietinumEST
GR406701GR406701Cicer arietinumEST
GR406354GR406354Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig2867 vs. TrEMBL
Match: C6SWU1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.982e-20
Identity = 52/84 (61.90%), Postives = 58/84 (69.05%), Query Frame = 1
Query:   73 MAATVAVAQGHTDPGHKCKTALGSIHQNRTRLFSPGSLSDLRPL----XXXXXXXXXXXXXXXXRLRRTDDSLRKVMYMNCWGQ 312
            MAATVAVAQGHT+PGHKCKTAL SIH NR+RLFS G+LSDLRPL                    R+ + DDSLRKVMY +CWGQ
Sbjct:    1 MAATVAVAQGHTEPGHKCKTALNSIHHNRSRLFSGGALSDLRPLSGVVGPDVSGAAAGSSDAKNRVSQADDSLRKVMYFSCWGQ 84          
BLAST of Cicer_arietinum_v1_Contig2867 vs. TrEMBL
Match: B9I6G9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_663544 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.989e-12
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 1
Query:   49 MSYLNRVWMAATVAVAQGHTDPGHKCKTALGSIHQNRTRLFSPGSLSDLRPLXXXXXXXXXXXXXXXXR---LRRTDDSLRKVMYMNCWGQ 312
            MSYLNRVWMAATVA A G+ D G K  ++L S+H  ++R+FS G + ++RPL                    +R+ D+SLR+VMY+NCWGQ
Sbjct:    1 MSYLNRVWMAATVA-AVGYPDQGWK--SSLKSLHHGKSRVFSGGDVVEIRPLAAASVGSDCIGLGGCGSEEGVRQNDESLRQVMYLNCWGQ 88          
BLAST of Cicer_arietinum_v1_Contig2867 vs. TrEMBL
Match: B9RW76_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1176530 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.484e-11
Identity = 41/91 (45.05%), Postives = 53/91 (58.24%), Query Frame = 1
Query:   49 MSYLNRVWMAATVAVAQGHTDPGHKCKTALGSIHQNRTRLFSPGSLSDLRPL---XXXXXXXXXXXXXXXXRLRRTDDSLRKVMYMNCWGQ 312
            MSYLNRV MAA+VAV QGH D G   K+ L S+   +  LFS G +S+LRPL                   R ++ D++ R+VMY+NCWGQ
Sbjct:    1 MSYLNRVCMAASVAVVQGHPDQG--WKSGLKSLQNGKRTLFSGGDVSELRPLSGVFGADRSGVPGSPEGQDRGKQNDETFRRVMYLNCWGQ 89          
BLAST of Cicer_arietinum_v1_Contig2867 vs. TrEMBL
Match: B9INV6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_574596 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.531e-11
Identity = 41/91 (45.05%), Postives = 53/91 (58.24%), Query Frame = 1
Query:   49 MSYLNRVWMAATVAVAQGHTDPGHKCKTALGSIHQNRTRLFSPGSLSDLRPLXXXXXXXXXXXXXXXXR---LRRTDDSLRKVMYMNCWGQ 312
            MSYLNRVW+AATVA  + H D G K    L S+ Q + R+FS G  +++RPL                    +R+ DDSLR+VMY+NCWGQ
Sbjct:    1 MSYLNRVWVAATVAAVR-HPDQGWKSN--LKSLQQGKMRVFSRGDATEIRPLAGSVESDCGGVFGSCGLEGGVRQNDDSLRRVMYLNCWGQ 88          
BLAST of Cicer_arietinum_v1_Contig2867 vs. TrEMBL
Match: Q94A22_ARATH (AT4g28240/F26K10_120 OS=Arabidopsis thaliana GN=At4g28240 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.140e-10
Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 1
Query:   49 MSYLNRVWMAATVAVAQGHTDPGHKCKTALGSIHQNRTRLFSPGSLSDLRPLXXXXXXXXXXXXXXXXRLRRT--DDSLRKVMYMNCWGQ 312
            MSYLN+VWMAA+    QG+ D G K K+ L S H+ + RL      SDLRPL                R   +  D+SLR+VMY+NCW Q
Sbjct:    1 MSYLNKVWMAASFVAVQGNADHGVKLKSGLTSAHRLQRRL-----SSDLRPLAAADLTGDSLPSEERRRTSSSTPDESLRQVMYLNCWAQ 85          
BLAST of Cicer_arietinum_v1_Contig2867 vs. TrEMBL
Match: D7MDL6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491951 PE=4 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.140e-10
Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 1
Query:   49 MSYLNRVWMAATVAVAQGHTDPGHKCKTALGSIHQNRTRLFSPGSLSDLRPLXXXXXXXXXXXXXXXXRLRRT--DDSLRKVMYMNCWGQ 312
            MSYLN+VWMAA+    QG+ D G K K+ L S H+ + RL      SDLRPL                R   +  D+SLR+VMY+NCW Q
Sbjct:    1 MSYLNKVWMAASFVAVQGNADHGVKLKSGLTSAHRLQRRL-----SSDLRPLAAADLTGDSLPSEERRRTSSSTPDESLRQVMYLNCWAQ 85          
BLAST of Cicer_arietinum_v1_Contig2867 vs. TrEMBL
Match: A8IXM2_BRACM (Wound-responsive protein-related OS=Brassica campestris PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.300e-7
Identity = 36/93 (38.71%), Postives = 48/93 (51.61%), Query Frame = 1
Query:   49 MSYLNRVWMAATVAVAQGHTDPGHKCKTALGSIHQNRTRLFSPGSLSDLRPLXXXXXXXXXXXXXXXXRLRRT-----DDSLRKVMYMNCWGQ 312
            M+YLN+VWMAA+    QG+ D G K KT+L S H+ + RL      SDL PL                    +     D+SLR+VMY++CW Q
Sbjct:    1 MNYLNKVWMAASFVAVQGNPDHGVKLKTSLSSAHRLQRRL-----SSDLLPLSAADVPVDDVPSEERRHPSSSSSSTPDESLRQVMYLSCWSQ 88          
BLAST of Cicer_arietinum_v1_Contig2867 vs. TAIR peptide
Match: AT4G28240.1 (| Symbols: | Wound-responsive family protein | chr4:13997979-13998239 REVERSE LENGTH=86)

HSP 1 Score: 67.0106 bits (162), Expect = 6.754e-12
Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 1
Query:   49 MSYLNRVWMAATVAVAQGHTDPGHKCKTALGSIHQNRTRLFSPGSLSDLRPLXXXXXXXXXXXXXXXXRLRRT--DDSLRKVMYMNCWGQ 312
            MSYLN+VWMAA+    QG+ D G K K+ L S H+ + RL      SDLRPL                R   +  D+SLR+VMY+NCW Q
Sbjct:    1 MSYLNKVWMAASFVAVQGNADHGVKLKSGLTSAHRLQRRL-----SSDLRPLAAADLTGDSLPSEERRRTSSSTPDESLRQVMYLNCWAQ 85          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig2867 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
C6SWU1_SOYBN2.982e-2061.90Putative uncharacterized protein OS=Glycine max PE... [more]
B9I6G9_POPTR2.989e-1246.15Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RW76_RICCO1.484e-1145.05Putative uncharacterized protein OS=Ricinus commun... [more]
B9INV6_POPTR2.531e-1145.05Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q94A22_ARATH8.140e-1043.33AT4g28240/F26K10_120 OS=Arabidopsis thaliana GN=At... [more]
D7MDL6_ARALY8.140e-1043.33Putative uncharacterized protein OS=Arabidopsis ly... [more]
A8IXM2_BRACM1.300e-738.71Wound-responsive protein-related OS=Brassica campe... [more]
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BLAST of Cicer_arietinum_v1_Contig2867 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G28240.16.754e-1243.33| Symbols: | Wound-responsive family protein | ch... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 13..92
score: 2.3
NoneNo IPR availableSEGsegsegcoord: 57..72
score
NoneNo IPR availableSEGsegsegcoord: 23..46
score
NoneNo IPR availableSEGsegsegcoord: 25..38
score
NoneNo IPR availableSEGsegsegcoord: 47..58
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig2867 ID=Cicer_arietinum_v1_Contig2867; Name=Cicer_arietinum_v1_Contig2867; organism=Cicer arietinum; type=contig; length=525bp
TACATCTTTTACAGCGAGGATTAAGAATTATTCTAAAGAACAACAAATAT
GAGTTACCTGAACCGTGTTTGGATGGCGGCAACCGTGGCGGTGGCACAAG
GCCACACTGATCCAGGCCACAAGTGCAAAACAGCTCTCGGATCTATTCAC
CAAAACCGAACTCGCCTCTTCTCCCCCGGAAGTTTATCGGATCTCCGGCC
GTTGTCCGGCGTCGTTGTATCGGACGTAACCGGGAGTTCTGAGGTGGAAG
AGAGGTTGAGACGAACCGACGATTCTCTCCGGAAAGTGATGTACATGAAT
TGCTGGGGTCAAGTGTAAATTACTAGAGTCAAACCTCCCAGGTAGCGTTG
AACTCGGTGGAAATCGCCGCAGTCGCCGGAGAATTGATCTGAATCGACTG
AGTCGAATCGGTTGATGTTGACTTGACTCGATCGGAGGGAAAGCCGTGAT
GGTTTTGGCTTTTGTTATTGTAAATTGTTATTGTAAATTGTAATTAACTG
ATCAGTGAATGAATCTCTTCCTCAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR022251DUF3774_wound-induced