Cicer_arietinum_v1_Contig3058

Contig Overview
NameCicer_arietinum_v1_Contig3058
Unique NameCicer_arietinum_v1_Contig3058
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length989
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FD449553ESTFD449553:80..343 +
FD449542ESTFD449542:80..348 +
FE672666ESTFE672666:1..435 +
FE671144ESTFE671144:13..597 +
FE670844ESTFE670844:16..637 +
FE670522ESTFE670522:194..628 +
FE672430ESTFE672430:18..688 +
HO065710ESTHO065710:265..752 -
HO066376ESTHO066376:515..747 +
FD449516ESTFD449516:472..743 -
EL585356ESTEL585356:438..743 -
GR403879ESTGR403879:619..941 -
GR405244ESTGR405244:491..941 +
FE669196ESTFE669196:302..991 -
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FD449553FD449553Cicer arietinumEST
FD449542FD449542Cicer arietinumEST
FE672666FE672666Cicer arietinumEST
FE671144FE671144Cicer arietinumEST
FE670844FE670844Cicer arietinumEST
FE670522FE670522Cicer arietinumEST
FE672430FE672430Cicer arietinumEST
HO065710HO065710Cicer arietinumEST
HO066376HO066376Cicer arietinumEST
FD449516FD449516Cicer arietinumEST
EL585356EL585356Cicer arietinumEST
GR403879GR403879Cicer arietinumEST
GR405244GR405244Cicer arietinumEST
FE669196FE669196Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig3058 vs. SwissProt
Match: PSBS_SPIOL (Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea GN=PSBS PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 5.544e-74
Identity = 163/275 (59.27%), Postives = 183/275 (66.55%), Query Frame = 2
Query:   41 MAQTMLLMS-SVSSTYSVDLKKDPXXXXXXXXXXPKFS--DISFNPLNSNSKSFSSRTFTTLALFKSXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPNTG---GVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQ MLLM   VS+T ++DLK++           PK S  ++ F+PL S+S S SS  F TLALFKS               ED            K+NELFVGRVAMIGFAAS+LGE +TGKGIL+QLNLETGIPIYEAEP           GAIGALGDRG+FVD EP TG    VIPPGK  RSALGL   GPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEP               PGTG+F+ D++++
Sbjct:    1 MAQAMLLMMPGVSTTNTIDLKRNALLKLQIQKIKPKSSTSNLFFSPLPSSSSS-SSTVFKTLALFKSKAKAPKKVEKPKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVD-EPTTGLEKAVIPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAINPGTGKFITDDEEE 273          
BLAST of Cicer_arietinum_v1_Contig3058 vs. SwissProt
Match: PSBS_SOLLC (Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum GN=PSBS PE=3 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 2.411e-69
Identity = 160/282 (56.74%), Postives = 177/282 (62.77%), Query Frame = 2
Query:   41 MAQTMLLMSSVS------STYSVDLKKDPXXXXXXXXXXPKFSDISFNPLNSNSKSFSSRTFTTLALFKSXXXXXXXXXXXXXXX---EDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDE-PNTG---GVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTMLL ++         +    LK  P           +FS  S    N++S  F+S   TT+ALFKS                  ED            KQNELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEP           GAIGALGDRGKFVDD  P TG    VIPPGK F+SALGLSEGGPLFGFTK+NELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEP               PGTG+F+ DE++D
Sbjct:    1 MAQTMLLTANAKVDLRSKESLVERLKPKPLSSLFLPSLPLRFSSSS---TNASSSKFTS---TTVALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276          
BLAST of Cicer_arietinum_v1_Contig3058 vs. SwissProt
Match: PSBS_SOLSG (Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum GN=PSBS PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 7.013e-69
Identity = 160/283 (56.54%), Postives = 179/283 (63.25%), Query Frame = 2
Query:   41 MAQTMLLMSSVSSTYSVDLKKDPXXXXXXXXXXPKFSDISFNP-----LNSNSKSFSSRTFT--TLALFKSXXXXXXXXXXXXXXX---EDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDE-PNTG---GVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTMLL ++      VDL+             PK     F P      +S++ +FSS  FT  T+ALFKS                  ED            KQNELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEP           GAIGALGDRG+F+DD  P TG    VIPPGK F+SALGLSEGGPLFGFTK+NELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEP               PGTG+F+ DE++D
Sbjct:    1 MAQTMLLTANAK----VDLRSKESLVERLK---PKPLSSLFLPSLPLRFSSSTTNFSSSKFTSTTVALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDDPAPATGLEKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276          
BLAST of Cicer_arietinum_v1_Contig3058 vs. SwissProt
Match: PSBS_TOBAC (Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum GN=PSBS PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.848e-67
Identity = 157/278 (56.47%), Postives = 173/278 (62.23%), Query Frame = 2
Query:   41 MAQTMLLMSSVSSTYSVDLKKDPXXXXXXXXXXPKFSDISFNPLNSNSKSFSSR---TFTTLALFKSXXXXXXXXXXXXXXX--EDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDE-PNTG---GVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTMLL ++      VDL+                  +   PL   S S S+    T TT+ALFKS                 ED            KQNELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEP           GAIGAL DRGKF+DD  P TG    VIPPGKGF+SALGLSEGGPLF FTK+NELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEP               PGTG+FV DE+++
Sbjct:    1 MAQTMLLTANAK----VDLRSKESLVERLKPKPLSSFFLPSLPLKYPSASASASSHFTSTTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLDKAVIPPGKGFKSALGLSEGGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274          
BLAST of Cicer_arietinum_v1_Contig3058 vs. SwissProt
Match: PSBS_ARATH (Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.159e-63
Identity = 147/273 (53.85%), Postives = 167/273 (61.17%), Query Frame = 2
Query:   41 MAQTMLLMSSVSSTYSVDLKKDPXXXXXXXXXXPKFSDISFNPLNSNSKSFSSRTFTTLALFK-SXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPNTG---GVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTMLL S V++ + +  K             PK   +  +  +  +     ++F  LALFK                 ED            K NELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEP           GAIGALGDRGKFVDD P TG    VIPPGK  RSALGL E GPLFGFTK+NELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEP               PG G+F+ D+ ++
Sbjct:    1 MAQTMLLTSGVTAGHFLRNKSP--------LAQPKVHHLFLSGNSPVALPSRRQSFVPLALFKPKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPP-TGLEKAVIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TrEMBL
Match: B7FJ53_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 2.917e-92
Identity = 186/242 (76.86%), Postives = 189/242 (78.10%), Query Frame = 2
Query:   41 MAQTMLLMSSVSSTYSVDLKKDPXXXXXXXXXXPKFSDISFNPLNSNSKSFSSRTFTTLALFKSXXXXXXXXXXXXXXX-EDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPNTGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEP 763
            MAQTMLLMSSVSSTYSVDLKKDP          P+FSD+SFNPL SNSK FSSRTFTTLALFKS                ED            KQNELFVGRVAMIGFAASILGEA+TGKGILAQLNLETGIPIYEAEP           GAIGALGDRGKFVDDEPNTGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGF FSLIGEIITGKGALAQLNIETGVPI EIEP
Sbjct:    1 MAQTMLLMSSVSSTYSVDLKKDPLLQLQCQRLRPRFSDVSFNPLPSNSKCFSSRTFTTLALFKSKTKAPAKVVKKPKPKVEDGIFGTSRGFGFTKQNELFVGRVAMIGFAASILGEALTGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVDDEPNTGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPITEIEP 242          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TrEMBL
Match: C6TK51_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 9.088e-86
Identity = 180/273 (65.93%), Postives = 191/273 (69.96%), Query Frame = 2
Query:   41 MAQTMLLMSSVSSTYSVDLKKDPXXXXXXXXXXPKFSDISFNPLNSNSKSFSS-RTFTTLALFKSXXXXXXXXXXXXXXX---EDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPNTGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTMLLMSSVSS+YSVDLKKD           PKFS +SFNPL S++ SFSS RTFTTLALFKS                  ED            KQNELFVGRVAM+GFAAS+LGE +TGKGILAQLNLETGIP+YEAEP           GAIG LGDRGKFVDDEP TGGVIPPGKGFR ALGL   GPLFGFTK+NE FVGRLAQLGF FSLIGEIITGKGALAQLNIETGVPINEIEP               PGTG+FV DE +D
Sbjct:    1 MAQTMLLMSSVSSSYSVDLKKDLFLQLQSQSLRPKFSQLSFNPLPSSTSSFSSPRTFTTLALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEGITGKGILAQLNLETGIPLYEAEPLLLFFILFTLLGAIGGLGDRGKFVDDEPTTGGVIPPGKGFREALGLG-SGPLFGFTKANEPFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFIAALNPGTGKFVTDEGED 272          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TrEMBL
Match: C6TD06_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 3.232e-83
Identity = 177/273 (64.84%), Postives = 188/273 (68.86%), Query Frame = 2
Query:   41 MAQTMLLMSSVSSTYSVDLKKDPXXXXXXXXXXPKFSDISFNPLNSNSKSFSS-RTFTTLALFKSXXXXXXXXXXXXXXX---EDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPNTGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTMLLMSSVSS+YSVDLKKD           PKFS +SFNPL  ++ SFSS RTFTTLALFKS                  ED            KQNELFVGRVAM+GFAAS+LGE +TGKGILAQLNLETGIPIYEAEP           GAIG LGDRGKFVDDEP TGGVIP GKGFR ALGL   GPLFGFTK+NELFVGRLAQLGF  SLIGEIITGKGALAQLNIETGVPINEIEP               PGTG+FV  + +D
Sbjct:    1 MAQTMLLMSSVSSSYSVDLKKDLFLQLQSQSLRPKFSQLSFNPLPPSTSSFSSPRTFTTLALFKSKTKAAPAKTKVTKPKQKVEDGIFGTSGGFGFTKQNELFVGRVAMLGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGGLGDRGKFVDDEPTTGGVIPSGKGFREALGLG-SGPLFGFTKANELFVGRLAQLGFVSSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFIAALNPGTGKFVTGDGED 272          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TrEMBL
Match: B9RJ42_RICCO (Photosystem II 22 kDa protein, chloroplast, putative OS=Ricinus communis GN=RCOM_1030930 PE=4 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 2.316e-81
Identity = 172/275 (62.55%), Postives = 189/275 (68.73%), Query Frame = 2
Query:   41 MAQTMLLMSSVSSTYSVDLKKDPXXXXXXXXXXPK-FSDISFNPLNSNSKSFS-SRTFTTLALFKSXXXXXXXXXXXXXXX--EDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPN--TGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTML MS VS+ + VDLK+DP          PK FS + F+PL +NS SF+ S+TFTT ALFKS                 ED            KQNELFVGRVAM+GFAAS+LGE +TGKGILAQLNLETGIPIYEAEP           GAIGALGDRGKFVDD P    G VIPPGKGFR+ALGL EGGPLFGFTKSNELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+P+NEIEP               PGTG+FV DE+D+
Sbjct:    1 MAQTMLFMSGVSTRHVVDLKRDPLLQFQVDRLRPKPFSSLLFSPLPTNSSSFAPSKTFTTFALFKSKAKAAPKKTVVKPKQKVEDGVFGTSGGIGFTKQNELFVGRVAMLGFAASLLGEGLTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPPTGIEGAVIPPGKGFRAALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPVNEIEPLVLFNVIFFFFAALNPGTGKFVTDEEDE 275          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TrEMBL
Match: A9PIG1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa GN=POPTRDRAFT_816277 PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 2.650e-77
Identity = 169/275 (61.45%), Postives = 186/275 (67.64%), Query Frame = 2
Query:   41 MAQTMLLMSSVSSTYSVDLKKDPXXXXXXXXXXPK-FSDISFNPLNSNSKSFSSRTFTTLALFK--SXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPNTG---GVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTM+LMS VS+   VDLK+DP          P  FS + +NPL S  K+ SS  FTTLALFK  +               ED            KQNELFVGRVAMIGFAAS+LGEA+TGKGIL+QLNLETGIPIYEAEP           GAIGALGDRG+FVDD P TG    VIPPGK FR+ALGL EGGPLFGFTKSNELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+P+NEIEP               PGTG+FV DED++
Sbjct:    1 MAQTMVLMSGVSTRQVVDLKRDPLLQFQVQRLRPAPFSRLLYNPLPS--KASSSNAFTTLALFKPRTKAVPKKAAPPPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDD-PTTGIEGAVIPPGKSFRAALGLKEGGPLFGFTKSNELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPVNEIEPLVLFNVLFFFIAALNPGTGKFVTDEDEE 272          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TrEMBL
Match: B2ZAP6_9ROSI (Putative photosystem II protein OS=Gossypioides kirkii PE=4 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 1.899e-75
Identity = 166/277 (59.93%), Postives = 187/277 (67.51%), Query Frame = 2
Query:   41 MAQTMLLMSS--VSSTYSVDLKKD-PXXXXXXXXXXPK-FSDISFNPLNSNSKSFSSRTFTTLALFKSXXXXXXXXXXXXXXX--EDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPN--TGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTML+MSS  VS+++ V+LK+D P          PK FS   FNPL++   + SS+ FTT ALFKS                 ED            KQNELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEP           GAIGALGDRG+FVD+ P    G VIPPGKG R ALGL EGGPLFGFTK+NELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI++IEP               PGTG+FV DE++D
Sbjct:    1 MAQTMLVMSSTSVSASHVVNLKRDHPLLHFQAQGLKPKPFSHFLFNPLSNAVAASSSKAFTTFALFKSKTKAAPKKAEPKPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVDEPPTGVEGAVIPPGKGVRGALGLKEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFAAAINPGTGKFVTDEEED 277          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TrEMBL
Match: A4L9I5_GOSHI (Putative photosystem II protein OS=Gossypium hirsutum PE=4 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 3.353e-72
Identity = 162/277 (58.48%), Postives = 183/277 (66.06%), Query Frame = 2
Query:   41 MAQTMLLMSS--VSSTYSVDLKKD-PXXXXXXXXXXPK-FSDISFNPLNSNSKSFSSRTFTTLALFK--SXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPN--TGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTML+MSS  VS+++ V+LK+D            PK  S   FNP ++   + SS+ FTT ALFK  +               ED            KQNELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEP           GAIGALGDRGKFVD+ P    G VIPPGKG R ALGL EGGPLFGFTK+NELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI++IEP               PGTG+FV DE ++
Sbjct:    1 MAQTMLVMSSTRVSTSHVVNLKRDHTLLHFQAQGLKPKPSSHFLFNPHSNTVAASSSKAFTTFALFKPKTKAAPKKAAPKPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPPTGIEGAVIPPGKGIRGALGLKEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAINPGTGKFVTDEAEE 277          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TrEMBL
Match: A4L9G7_GOSRA (Putative photosystem II protein OS=Gossypium raimondii PE=4 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 3.353e-72
Identity = 162/277 (58.48%), Postives = 183/277 (66.06%), Query Frame = 2
Query:   41 MAQTMLLMSS--VSSTYSVDLKKD-PXXXXXXXXXXPK-FSDISFNPLNSNSKSFSSRTFTTLALFK--SXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPN--TGGVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTML+MSS  VS+++ V+LK+D            PK  S   FNP ++   + SS+ FTT ALFK  +               ED            KQNELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEP           GAIGALGDRGKFVD+ P    G VIPPGKG R ALGL EGGPLFGFTK+NELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI++IEP               PGTG+FV DE ++
Sbjct:    1 MAQTMLVMSSTSVSTSHVVNLKRDHTLLHFQAQGLKPKPSSHFLFNPHSNTVAASSSKAFTTFALFKPKTKAAPKKAAPKPKPKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDEPPTGIEGAVIPPGKGIRGALGLKEGGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAINPGTGKFVTDEAEE 277          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TrEMBL
Match: Q2LAH1_NICBE (Chloroplast photosystem II 22 kDa component OS=Nicotiana benthamiana GN=psbS2 PE=4 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 4.531e-69
Identity = 160/278 (57.55%), Postives = 179/278 (64.39%), Query Frame = 2
Query:   41 MAQTMLLMSSVSSTYSVDLK-KDPXXXXXXXXXXPKF--SDISFNPLNSNSKSFSSRTFTTLALFKSXXXXXXXXXXXXXXX--EDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDE-PNTG---GVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTMLL ++      VDL+ K+P            F    +     +++S S S  T TT+ALFKS                 ED            KQNELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEP           GAIGALGDRGKF+DD  P TG    VIPPGKGF+SALGLSEGGPLFGFTK+NELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEP               PGTG+FV DE+++
Sbjct:    1 MAQTMLLTANAK----VDLRNKEPLVERLKPKPLSSFFLPSLPLKYPSASSSSSSHFTSTTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDDPVPATGLDKAVIPPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TrEMBL
Match: Q2LAH0_NICBE (Chloroplast photosystem II 22 kDa component OS=Nicotiana benthamiana GN=psbS1 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 1.009e-68
Identity = 160/281 (56.94%), Postives = 177/281 (62.99%), Query Frame = 2
Query:   41 MAQTMLLMSSVS------STYSVDLKKDPXXXXXXXXXXPKFSDISFNPLNSNSKSFSSRTFTTLALFKSXXXXXXXXXXXXXXX--EDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDE-PNTG---GVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTMLL ++         +    LK  P           K+   S    +S+S S S  T TT+ALFKS                 ED            KQNELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEP           GAIGALGDRGKF+DD  P TG    VIPPGKGF+SALGLSEGGPLFGFTK+NELFVGRLAQLG AFS+IGEIITGKGALAQLN ETGVPINEIEP               PGTG+FV DE+++
Sbjct:    1 MAQTMLLTANAKVDLRSKESLVERLKPKPLSSFFLPSLSLKYPSAS----SSSSSSSSHFTSTTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFIDDPTPPTGLDKAVIPPGKGFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLNFETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 277          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TAIR peptide
Match: AT1G44575.1 (| Symbols: NPQ4, PSBS | Chlorophyll A-B binding family protein | chr1:16871768-16873194 FORWARD LENGTH=265)

HSP 1 Score: 243.817 bits (621), Expect = 1.110e-64
Identity = 147/273 (53.85%), Postives = 167/273 (61.17%), Query Frame = 2
Query:   41 MAQTMLLMSSVSSTYSVDLKKDPXXXXXXXXXXPKFSDISFNPLNSNSKSFSSRTFTTLALFK-SXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPNTG---GVIPPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPXXXXXXXXXXXXXXXPGTGQFVKDEDDD 847
            MAQTMLL S V++ + +  K             PK   +  +  +  +     ++F  LALFK                 ED            K NELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEP           GAIGALGDRGKFVDD P TG    VIPPGK  RSALGL E GPLFGFTK+NELFVGRLAQLG AFSLIGEIITGKGALAQLNIETG+PI +IEP               PG G+F+ D+ ++
Sbjct:    1 MAQTMLLTSGVTAGHFLRNKSP--------LAQPKVHHLFLSGNSPVALPSRRQSFVPLALFKPKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPP-TGLEKAVIPPGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264          
BLAST of Cicer_arietinum_v1_Contig3058 vs. TAIR peptide
Match: AT1G44575.2 (| Symbols: NPQ4, PSBS | Chlorophyll A-B binding family protein | chr1:16871768-16872548 FORWARD LENGTH=205)

HSP 1 Score: 141.739 bits (356), Expect = 5.939e-34
Identity = 95/193 (49.22%), Postives = 107/193 (55.44%), Query Frame = 2
Query:   41 MAQTMLLMSSVSSTYSVDLKKDPXXXXXXXXXXPKFSDISFNPLNSNSKSFSSRTFTTLALFK-SXXXXXXXXXXXXXXXEDXXXXXXXXXXXXKQNELFVGRVAMIGFAASILGEAVTGKGILAQLNLETGIPIYEAEPXXXXXXXXXXXGAIGALGDRGKFVDDEPNTG---GVIPPGKGFRSALGLSEGG 607
            MAQTMLL S V++ + +  K             PK   +  +  +  +     ++F  LALFK                 ED            K NELFVGRVAMIGFAAS+LGEA+TGKGILAQLNLETGIPIYEAEP           GAIGALGDRGKFVDD P TG    VIPPGK  RSALGL E G
Sbjct:    1 MAQTMLLTSGVTAGHFLRNKSP--------LAQPKVHHLFLSGNSPVALPSRRQSFVPLALFKPKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDDPP-TGLEKAVIPPGKNVRSALGLKEQG 184          

HSP 2 Score: 78.9518 bits (193), Expect = 4.727e-15
Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = 2
Query:  560 PPGKGFRSALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEP 763
            P  K      G S G    GFTK+NELFVGR+A +GFA SL+GE +TGKG LAQLN+ETG+PI E EP
Sbjct:   68 PKSKVEDGIFGTSGG---IGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAEP 132          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig3058 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
PSBS_SPIOL5.544e-7459.27Photosystem II 22 kDa protein, chloroplastic OS=Sp... [more]
PSBS_SOLLC2.411e-6956.74Photosystem II 22 kDa protein, chloroplastic OS=So... [more]
PSBS_SOLSG7.013e-6956.54Photosystem II 22 kDa protein, chloroplastic OS=So... [more]
PSBS_TOBAC3.848e-6756.47Photosystem II 22 kDa protein, chloroplastic OS=Ni... [more]
PSBS_ARATH1.159e-6353.85Photosystem II 22 kDa protein, chloroplastic OS=Ar... [more]
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BLAST of Cicer_arietinum_v1_Contig3058 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FJ53_MEDTR2.917e-9276.86Putative uncharacterized protein (Fragment) OS=Med... [more]
C6TK51_SOYBN9.088e-8665.93Putative uncharacterized protein OS=Glycine max PE... [more]
C6TD06_SOYBN3.232e-8364.84Putative uncharacterized protein OS=Glycine max PE... [more]
B9RJ42_RICCO2.316e-8162.55Photosystem II 22 kDa protein, chloroplast, putati... [more]
A9PIG1_POPTR2.650e-7761.45Putative uncharacterized protein OS=Populus tricho... [more]
B2ZAP6_9ROSI1.899e-7559.93Putative photosystem II protein OS=Gossypioides ki... [more]
A4L9I5_GOSHI3.353e-7258.48Putative photosystem II protein OS=Gossypium hirsu... [more]
A4L9G7_GOSRA3.353e-7258.48Putative photosystem II protein OS=Gossypium raimo... [more]
Q2LAH1_NICBE4.531e-6957.55Chloroplast photosystem II 22 kDa component OS=Nic... [more]
Q2LAH0_NICBE1.009e-6856.94Chloroplast photosystem II 22 kDa component OS=Nic... [more]
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BLAST of Cicer_arietinum_v1_Contig3058 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G44575.11.110e-6453.85| Symbols: NPQ4, PSBS | Chlorophyll A-B binding fa... [more]
AT1G44575.25.939e-3449.22| Symbols: NPQ4, PSBS | Chlorophyll A-B binding fa... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 96..226
score: 6.8
NoneNo IPR availableGENE3D1.10.3460.10no descriptioncoord: 101..251
score: 1.3
NoneNo IPR availableSEGsegsegcoord: 37..46
score: NAcoord: 78..92
score: NAcoord: 95..106
score: NAcoord: 153..163
score: NAcoord: 255..269
score
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 65..263
score: 3.3
NoneNo IPR availableSEGsegsegcoord: 15..28
score
NoneNo IPR availableSEGsegsegcoord: 56..70
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig3058 ID=Cicer_arietinum_v1_Contig3058; Name=Cicer_arietinum_v1_Contig3058; organism=Cicer arietinum; type=contig; length=989bp
ATTATTTCATACCACAACACACAACTCTGCTAGCATAGCAATGGCTCAAA
CCATGTTGCTCATGTCTAGTGTCTCTAGTACCTATTCCGTCGATTTGAAG
AAAGACCCTTTGCTCCAATTACAGTGTCAAAGATTGAGGCCTAAATTCTC
TGATATTTCTTTCAACCCACTTAATTCTAATTCTAAGTCTTTTTCGTCAC
GCACATTCACAACTCTCGCTCTCTTTAAATCAAAGGCCAAAGCCCCTCCT
AAGGTTGTAAAGCCAAAACCAAAGGTTGAAGATGGTGTGTTTGGAACTTC
TGGAGGATTTGGTTTCACTAAGCAGAACGAACTCTTTGTGGGTCGTGTTG
CTATGATCGGTTTTGCAGCATCAATATTGGGAGAAGCAGTAACTGGGAAA
GGAATTCTAGCACAATTGAATCTGGAAACTGGAATTCCAATTTATGAAGC
TGAGCCACTTCTTCTATTTTTCATTATTTTCACATTGCTAGGAGCCATTG
GTGCTCTAGGTGATCGTGGTAAATTTGTTGATGATGAGCCTAATACTGGA
GGTGTTATTCCTCCCGGTAAAGGCTTTAGATCAGCTCTTGGTCTCAGTGA
AGGAGGTCCTTTATTTGGATTCACAAAATCGAACGAGTTGTTTGTTGGAA
GATTGGCTCAATTGGGATTTGCTTTCTCTTTGATTGGAGAAATTATTACT
GGAAAGGGAGCTCTAGCACAACTCAACATTGAGACAGGGGTACCAATCAA
TGAAATTGAACCATTAGTGTTGTTCAATGTTGCTTTCTTCTTCGTTGCTG
CTTTGAATCCTGGAACTGGCCAATTTGTAAAAGATGAAGACGATGATTAG
ATTAGAATATACTAACCACTTTCTTTGTACTTAAAACAAAACTTCTTCTA
GTATGTTTTTTCATCTATCATTAATGCATTCAGTTCATCATCTCTAATTG
GATCTTACAATAAGATTATTGAATTCGAATCCTGCAGCC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind