Cicer_arietinum_v1_Contig3070

Contig Overview


Name	Cicer_arietinum_v1_Contig3070
Unique Name	Cicer_arietinum_v1_Contig3070
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	1192

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR402881	EST	GR402881:25..170 +	Cicer arietinum unigene v1	n/a
GR393289	EST	GR393289:339..534 +	Cicer arietinum unigene v1	n/a
FE673184	EST	FE673184:1..720 +	Cicer arietinum unigene v1	n/a
FE669452	EST	FE669452:354..813 +	Cicer arietinum unigene v1	n/a
GR398014	EST	GR398014:344..1133 +	Cicer arietinum unigene v1	n/a
GR397903	EST	GR397903:408..1192 +	Cicer arietinum unigene v1	n/a
HO065244	EST	HO065244:702..1178 -	Cicer arietinum unigene v1	n/a
GR398129	EST	GR398129:729..1185 +	Cicer arietinum unigene v1	n/a
GR406689	EST	GR406689:455..1155 +	Cicer arietinum unigene v1	n/a
GR408458	EST	GR408458:558..1152 -	Cicer arietinum unigene v1	n/a
HO065579	EST	HO065579:431..1150 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR402881	GR402881	Cicer arietinum	EST
GR393289	GR393289	Cicer arietinum	EST
FE673184	FE673184	Cicer arietinum	EST
FE669452	FE669452	Cicer arietinum	EST
GR398014	GR398014	Cicer arietinum	EST
GR397903	GR397903	Cicer arietinum	EST
HO065244	HO065244	Cicer arietinum	EST
GR398129	GR398129	Cicer arietinum	EST
GR406689	GR406689	Cicer arietinum	EST
GR408458	GR408458	Cicer arietinum	EST
HO065579	HO065579	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
Match: H1_SOLPN (Histone H1 OS=Solanum pennellii PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.515e-31
Identity = 69/94 (73.40%), Postives = 80/94 (85.11%), Query Frame = 3

Query:  546 SHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPK---KEVTAKVTKANAAEK 818
            +HPPYFQMIKEALLALNEKGGSSPYA+AKYME+KHK  LPANF+K+L LQLKN AAKGKL+KIKASYKLSEA K +   K  T K+ KA++ +K
Sbjct:   48 THPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKETTTKTSTKKLPKADSKKK 141

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 7.800e-20
Identity = 47/100 (47.00%), Postives = 67/100 (67.00%), Query Frame = 3

Query:  546 SHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAEKKQEGSKRKR 845
            +H PY +M+ EA+ +L E+ GSS YAIAK++E+KHK+ LP NF+K+L++QLK   A GKL K+K SYKLS A KP  +  A   K     KK + + + +
Sbjct:   49 THLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLSSATKPNPKPKAAPKKPKTGAKKPKAAAKPK 148

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.269e-19
Identity = 54/98 (55.10%), Postives = 67/98 (68.37%), Query Frame = 3

Query:  543 ASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAEKKQEGSK 836
            ASHP Y +MIK+A+++L EK GSS YAIAK++EEK K  LPANFKK+L   LK   A GKL+K+K S+KLS AA  KK   AK     AA+ K   +K
Sbjct:   60 ASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQ-LPANFKKLLLQNLKKNVASGKLIKVKGSFKLSAAA--KKPAVAKPKAKTAAKAKSVKAK 154

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
Match: H1_WHEAT (Histone H1 OS=Triticum aestivum PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.471e-18
Identity = 50/109 (45.87%), Postives = 67/109 (61.47%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSE---------------AAKPKKEVTAKVTKANAAEKK 821
            T +HP Y +M+ EA+ AL E+ GSS  AI K++E+KHK+ LPANF+K+L  Q+K   A GKL K+K SYKL++               AAKPK +  AK T A +  KK
Sbjct:   52 TPAHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKLAKAPAAVKPKTATKKKPAAKPKAKAPAKKTAAKSPAKK 160

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.921e-18
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAEKK 821
            T +HPPYF+MIK+A++ L E+ GSS +AI K++EEK KS LP+NFKK+L  QLK   A  KLVK+K SYKL   +KP         K  AA+ K
Sbjct:   53 TPTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKS-LPSNFKKLLLTQLKKFVASEKLVKVKNSYKLPSGSKPAAAAVPAKKKPAAAKSK 145

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 8.071e-17
Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 3

Query:  543 ASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAEKKQEG---SKRKRNVVA 857
            +SHP Y +MIK+A++ L E+ GSS YAI K++EEK K  LP  F+K+L L LK   A GKLVK+KAS+KL  A+       A   K+  A+KK      +K KR V A
Sbjct:   60 SSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKE-LPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASAKASSPKAAAEKSAPAKKKPATVAVTKAKRKVAA 166

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.377e-16
Identity = 54/125 (43.20%), Postives = 70/125 (56.00%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEA-------------------AKPKKEVTAKVTKANAAEKKQEGSKRKRNVVA 857
            T+SHP Y +MIK+A++ L E+ GSS YAI K++EEKHKS LP  F+K+L + LK   A  KLVK+KAS+K+  A                   AKPK +V A V  A A    +   K    VVA
Sbjct:   59 TSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKS-LPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVVA 182

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
Match: H1_EUPES (Histone H1 OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.166e-15
Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAK------------PKKEVTAKVTKANAAEKKQEGSK 836
            T+SHP +F+MI +A+  L E+ GSS YAI K++E+KHK  LP+NF+K+L   LK   A GKLVK+K S+KL  A              PK +V AK   A    K +  +K
Sbjct:   48 TSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQ-LPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSARAAPAPALAKKPTIPKPKVAAKPKTAKIGAKPKAKAK 157

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
Match: H12_VOLCA (Histone H1-II OS=Volvox carteri GN=H1-II PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 2.871e-14
Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 3

Query:  546 SHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKH-KSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAK---VTKANAAEKKQEGSKRKR 845
            +HPPY QM+ +A+L+L E+ GSS  A+ K++E K+ K      F K LSL LK     GKLVK+K SYKLS+A K K +  AK     K  AA KK    K+ +
Sbjct:   24 THPPYIQMVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKVKNSYKLSDAQKSKAKAAAKPKAAPKKAAAPKKAAAPKKAK 127

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
Match: H11_VOLCA (Histone H1-I OS=Volvox carteri GN=H1-I PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 4.897e-14
Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = 3

Query:  546 SHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKH-KSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPK-KEVTAKVTKAN--AAEKKQEGSKRKRNVV 854
            +HPPY +M+K+A+  L E+ GSS  A+ K++E K+ K     NF K LS  +K     GKLVK+K S+KLSEA K K K+ T K  KA+  A  KK E   +K   V
Sbjct:   58 THPPYIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKVKGSFKLSEALKAKAKKSTPKKAKADGEAKPKKSEAKPKKAEAV 164

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
Match: C6T0S3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 4.637e-37
Identity = 85/106 (80.19%), Postives = 92/106 (86.79%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAEKKQEGSKRKRNVVA 857
            TASHPPYFQMIKEAL+ALNEKGGSSPYAIAKYMEEKHK+ LPANFKK+L LQLKNQAA+GKLVKIKASYKL+EAA  KKE TAKVTKA  AEKK+   KR +   A
Sbjct:   44 TASHPPYFQMIKEALIALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNQAARGKLVKIKASYKLTEAA--KKENTAKVTKA-TAEKKESRPKRSKTATA 146

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
Match: B9MXI5_POPTR (Histone H1 OS=Populus trichocarpa GN=HON906 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 6.929e-33
Identity = 71/97 (73.20%), Postives = 83/97 (85.57%), Query Frame = 3

Query:  546 SHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAEKKQEGSK 836
            +HPPYFQMIKEA+LALNEK GSSPYAIAKYMEEKHK+ LPANFKK+L LQLKN AA+GKL+KI+ASYKLSEA K +K  T KV+K ++A KK +  K
Sbjct:   52 AHPPYFQMIKEAILALNEKSGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNSAARGKLIKIRASYKLSEAGKKEKSTTGKVSKGSSAVKKTKEVK 148

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
Match: Q9SWA4_TOBAC (Histone H1C OS=Nicotiana tabacum GN=H1c PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.485e-31
Identity = 70/96 (72.92%), Postives = 80/96 (83.33%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAEKKQE 827
            T +HPPYFQMIKEALLALNEKGGSSPYAIAKY E+KHK  LPANF+K+L LQLKN AAKGKL+KIKASYKLSEA K K+ +TA   K   A+ K++
Sbjct:   51 TVTHPPYFQMIKEALLALNEKGGSSPYAIAKYTEDKHKDELPANFRKILGLQLKNSAAKGKLMKIKASYKLSEAGK-KERITASTKKVPKADSKKK 145

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
Match: B9SZV0_RICCO (Histone h1/h5, putative OS=Ricinus communis GN=RCOM_0292320 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.485e-31
Identity = 72/104 (69.23%), Postives = 84/104 (80.77%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAEKKQEGSKRKRNV 851
            TASHPPYFQMIKEALL LNEK GSSPYAIAKYMEEKHK+ LP+NFKK+L+LQLKN AA+GKL+KI+ASYKLSE+ K K++ T KV KA     K+    +  NV
Sbjct:   49 TASHPPYFQMIKEALLTLNEKSGSSPYAIAKYMEEKHKAVLPSNFKKILALQLKNSAARGKLIKIRASYKLSESNK-KEKGTTKVPKAAKGGDKKPKQPKTANV 151

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
Match: Q8H6B7_TOBAC (Histone H1D OS=Nicotiana tabacum GN=H1d PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.887e-30
Identity = 74/107 (69.16%), Postives = 82/107 (76.64%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAE-KKQEGSKRKRNVVA 857
            T +HPPYFQMIKEALLALNEKGGSSPYAIAKYME+KHK  LPANF+K+L LQLKN AAKGKL+KIKASYKLS A K K+  TA   K   A+ KK+  S R     A
Sbjct:   51 TVTHPPYFQMIKEALLALNEKGGSSPYAIAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLMKIKASYKLSVAGK-KERTTASTKKVPKADTKKKPRSTRSTTATA 156

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
Match: Q8H0G8_TOBAC (Stress-inducible H1 histone-like protein OS=Nicotiana tabacum GN=A10 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.887e-30
Identity = 74/107 (69.16%), Postives = 82/107 (76.64%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAE-KKQEGSKRKRNVVA 857
            T +HPPYFQMIKEALLALNEKGGSSPYAIAKYME+KHK  LPANF+K+L LQLKN AAKGKL+KIKASYKLS A K K+  TA   K   A+ KK+  S R     A
Sbjct:   51 TVTHPPYFQMIKEALLALNEKGGSSPYAIAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLMKIKASYKLSVAGK-KERTTASTKKVPKADTKKKPRSTRSTTATA 156

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
Match: Q9M4U6_SOLCI (Histone H1 variant OS=Solanum chilense PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.464e-30
Identity = 69/94 (73.40%), Postives = 80/94 (85.11%), Query Frame = 3

Query:  546 SHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPK---KEVTAKVTKANAAEK 818
            +HPPYFQMIKEALLALNEKGGSSPYA+AKYME+KHK  LPANF+K+L LQLKN AAKGKL+KIKASYKLSEA K +   K  T K+ KA++ +K
Sbjct:   48 THPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKETTTKTSTKKLLKADSKKK 141

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
Match: Q949M1_BETVU (Putative linker histone H1 variant protein OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.203e-30
Identity = 68/107 (63.55%), Postives = 84/107 (78.50%), Query Frame = 3

Query:  546 SHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAK-------VTKANAAEKKQEGSKRKR 845
            SHPPYFQMIKEA+LALNEKGGSSPYAIAK+ME+KHK+ LP+NF+K+L LQLKN  ++GKL+K+KASYKLSEA K + E  +K        TKA  A   +E +KR+R
Sbjct:   54 SHPPYFQMIKEAILALNEKGGSSPYAIAKFMEQKHKTVLPSNFRKILGLQLKNSVSRGKLIKVKASYKLSEAGKKRSEKGSKSRSSSSSTTKAARANAAKEPTKRRR 160

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
Match: Q43511_SOLLC (H1 histone-like protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.203e-30
Identity = 72/107 (67.29%), Postives = 85/107 (79.44%), Query Frame = 3

Query:  546 SHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPK---KEVTAKVTKANAAEKKQEGSKRKRNVVA 857
            +HPPYFQMIKEALL+LNEKGGSSPYA+AKYME+KHK  LPANF+K+L LQLKN AAKGKL+KIKASYKLSEA K +   K  T K+ KA++  KK+  S R  +  A
Sbjct:   53 THPPYFQMIKEALLSLNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKETTTKTSTKKLPKADS--KKKPRSTRATSTAA 157

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
Match: A9PCF2_POPTR (Histone H1 OS=Populus trichocarpa GN=HON905 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.203e-30
Identity = 70/110 (63.64%), Postives = 82/110 (74.55%), Query Frame = 3

Query:  543 ASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEA-----AKPKKEVTAKVTKANAAEKKQEGSKRKRNVVA 857
            A+HPPYFQMIKEA+LALN++ GSSPYAIAKYMEEKHK+ LPANFKK+L LQLKN A  GKL+KI+ASYKL EA      KP    T  V KA A+ KK  G+K+ +   A
Sbjct:   51 AAHPPYFQMIKEAILALNDESGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNSATGGKLIKIRASYKLPEAKKTKEVKPTTRKTRSVNKAEASAKKVAGAKKAKKSAA 160

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TAIR peptide
Match: AT2G18050.1 (| Symbols: HIS1-3 | histone H1-3 | chr2:7846095-7846670 FORWARD LENGTH=167)

HSP 1 Score: 125.176 bits (313), Expect = 7.393e-29
Identity = 64/103 (62.14%), Postives = 76/103 (73.79%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAEKKQEGSKRKRN 848
            T +HPPYFQMIKEAL+ L EK GSSPYAIAK +EEKHKS LP +F+K LSLQLKN  AKGKLVKI+ASYKLS+  K       K  K N  ++ +E +KR R+
Sbjct:   21 TTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDKEITKRTRS 123

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TAIR peptide
Match: AT2G18050.2 (| Symbols: HIS1-3 | histone H1-3 | chr2:7846254-7846670 FORWARD LENGTH=138)

HSP 1 Score: 107.457 bits (267), Expect = 1.595e-23
Identity = 57/94 (60.64%), Postives = 68/94 (72.34%), Query Frame = 3

Query:  567 MIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAEKKQEGSKRKRN 848
            MIKEAL+ L EK GSSPYAIAK +EEKHKS LP +F+K LSLQLKN  AKGKLVKI+ASYKLS+  K       K  K N  ++ +E +KR R+
Sbjct:    1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDKEITKRTRS 94

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TAIR peptide
Match: AT1G06760.1 (| Symbols: | winged-helix DNA-binding transcription factor family protein | chr1:2076687-2077616 REVERSE LENGTH=274)

HSP 1 Score: 88.5817 bits (218), Expect = 7.669e-18
Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 3

Query:  543 ASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKANAAEKKQEG---SKRKRNVVA 857
            +SHP Y +MIK+A++ L E+ GSS YAI K++EEK K  LP  F+K+L L LK   A GKLVK+KAS+KL  A+       A   K+  A+KK      +K KR V A
Sbjct:   60 SSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRKE-LPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASAKASSPKAAAEKSAPAKKKPATVAVTKAKRKVAA 166

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TAIR peptide
Match: AT2G30620.1 (| Symbols: | winged-helix DNA-binding transcription factor family protein | chr2:13045360-13046267 FORWARD LENGTH=273)

HSP 1 Score: 87.8113 bits (216), Expect = 1.308e-17
Identity = 54/125 (43.20%), Postives = 70/125 (56.00%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEA-------------------AKPKKEVTAKVTKANAAEKKQEGSKRKRNVVA 857
            T+SHP Y +MIK+A++ L E+ GSS YAI K++EEKHKS LP  F+K+L + LK   A  KLVK+KAS+K+  A                   AKPK +V A V  A A    +   K    VVA
Sbjct:   59 TSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKS-LPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVVA 182

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BLAST of Cicer_arietinum_v1_Contig3070 vs. TAIR peptide
Match: AT2G30620.2 (| Symbols: | winged-helix DNA-binding transcription factor family protein | chr2:13045360-13046267 FORWARD LENGTH=202)

HSP 1 Score: 85.5001 bits (210), Expect = 6.492e-17
Identity = 49/110 (44.55%), Postives = 66/110 (60.00%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEA--------AKPKKEVTAKVTKANAAEKKQEGSKRKR 845
            T+SHP Y +MIK+A++ L E+ GSS YAI K++EEKHKS LP  F+K+L + LK   A  KLVK+KAS+K+  A        A P K+    V K  A+      S  K+
Sbjct:   59 TSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKS-LPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKASRTSTRTSPGKK 167

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BLAST of Cicer_arietinum_v1_Contig3070 vs. TAIR peptide
Match: AT1G48620.1 (| Symbols: HON5 | high mobility group A5 | chr1:17974148-17976301 REVERSE LENGTH=479)

HSP 1 Score: 57.7658 bits (138), Expect = 1.450e-8
Identity = 32/75 (42.67%), Postives = 43/75 (57.33%), Query Frame = 3

Query:  546 SHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKP 770
            SHPPY  MI  A+ ALNE  GSS  AI++Y+E  + + +P     +L+  LK     G LV +K SYKL+    P
Sbjct:   74 SHPPYSDMICTAIAALNEPDGSSKQAISRYIERIY-TGIPTAHGALLTHHLKTLKTSGILVMVKKSYKLASTPPP 147

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BLAST of Cicer_arietinum_v1_Contig3070 vs. TAIR peptide
Match: AT3G18035.1 (| Symbols: HON4 | winged-helix DNA-binding transcription factor family protein | chr3:6169384-6171558 REVERSE LENGTH=480)

HSP 1 Score: 54.6842 bits (130), Expect = 1.227e-7
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 3

Query:  549 HPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPKKEVTAKVTKA 803
            HPPY +MI  A+ ALNE  GSS  AI++Y+E  + + L +    +L+  LK     G L  +K SYK++ ++ P   V      A
Sbjct:   65 HPPYSEMICAAIAALNEPDGSSKMAISRYIERCY-TGLTSAHAALLTHHLKTLKTSGVLSMVKKSYKIAGSSTPPASVAVAAAAA 148

[Close]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TAIR peptide
Match: AT1G72740.2 (| Symbols: | Homeodomain-like/winged-helix DNA-binding family protein | chr1:27380499-27382687 REVERSE LENGTH=281)

HSP 1 Score: 52.7582 bits (125), Expect = 4.663e-7
Identity = 34/95 (35.79%), Postives = 55/95 (57.89%), Query Frame = 3

Query:  540 TASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSALPANFKKMLSLQLKNQAAKGKLVKIKASYKLSEAAKPK------KEVTAKVTKAN 806
            T + P Y  +I EAL AL +  GS   +I  ++E +H+  +P NF+++LS +L+  AA+ KL KI+  YK+ + +  K      KE   K+ +AN
Sbjct:  117 TKNAPRYDGVIFEALSALADGNGSDVSSIYHFIEPRHE--VPPNFRRILSTRLRRLAAQSKLEKIQNFYKIPDPSGTKIGVPKPKETHTKLRQAN 209

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig3070 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig3070 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
H1_SOLPN	1.515e-31	73.40	Histone H1 OS=Solanum pennellii PE=2 SV=1	[more]
H1_MAIZE	7.800e-20	47.00	Histone H1 OS=Zea mays PE=2 SV=2	[more]
H1_PEA	2.269e-19	55.10	Histone H1 OS=Pisum sativum PE=2 SV=1	[more]
H1_WHEAT	1.471e-18	45.87	Histone H1 OS=Triticum aestivum PE=2 SV=2	[more]
H1_SOLLC	1.921e-18	52.13	Histone H1 OS=Solanum lycopersicum PE=3 SV=1	[more]
H11_ARATH	8.071e-17	47.22	Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 ...	[more]
H12_ARATH	1.377e-16	43.20	Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 ...	[more]
H1_EUPES	1.166e-15	43.24	Histone H1 OS=Euphorbia esula PE=2 SV=1	[more]
H12_VOLCA	2.871e-14	45.19	Histone H1-II OS=Volvox carteri GN=H1-II PE=2 SV=3	[more]
H11_VOLCA	4.897e-14	44.86	Histone H1-I OS=Volvox carteri GN=H1-I PE=2 SV=3	[more]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6T0S3_SOYBN	4.637e-37	80.19	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9MXI5_POPTR	6.929e-33	73.20	Histone H1 OS=Populus trichocarpa GN=HON906 PE=3 S...	[more]
Q9SWA4_TOBAC	6.485e-31	72.92	Histone H1C OS=Nicotiana tabacum GN=H1c PE=2 SV=1	[more]
B9SZV0_RICCO	6.485e-31	69.23	Histone h1/h5, putative OS=Ricinus communis GN=RCO...	[more]
Q8H6B7_TOBAC	1.887e-30	69.16	Histone H1D OS=Nicotiana tabacum GN=H1d PE=2 SV=1	[more]
Q8H0G8_TOBAC	1.887e-30	69.16	Stress-inducible H1 histone-like protein OS=Nicoti...	[more]
Q9M4U6_SOLCI	2.464e-30	73.40	Histone H1 variant OS=Solanum chilense PE=3 SV=1	[more]
Q949M1_BETVU	4.203e-30	63.55	Putative linker histone H1 variant protein OS=Beta...	[more]
Q43511_SOLLC	4.203e-30	67.29	H1 histone-like protein OS=Solanum lycopersicum PE...	[more]
A9PCF2_POPTR	4.203e-30	63.64	Histone H1 OS=Populus trichocarpa GN=HON905 PE=2 S...	[more]

BLAST of Cicer_arietinum_v1_Contig3070 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 8


Match Name	E-value	Identity	Description
AT2G18050.1	7.393e-29	62.14	\| Symbols: HIS1-3 \| histone H1-3 \| chr2:7846095-78...	[more]
AT2G18050.2	1.595e-23	60.64	\| Symbols: HIS1-3 \| histone H1-3 \| chr2:7846254-78...	[more]
AT1G06760.1	7.669e-18	47.22	\| Symbols: \| winged-helix DNA-binding transcripti...	[more]
AT2G30620.1	1.308e-17	43.20	\| Symbols: \| winged-helix DNA-binding transcripti...	[more]
AT2G30620.2	6.492e-17	44.55	\| Symbols: \| winged-helix DNA-binding transcripti...	[more]
AT1G48620.1	1.450e-8	42.67	\| Symbols: HON5 \| high mobility group A5 \| chr1:17...	[more]
AT3G18035.1	1.227e-7	36.47	\| Symbols: HON4 \| winged-helix DNA-binding transcr...	[more]
AT1G72740.2	4.663e-7	35.79	\| Symbols: \| Homeodomain-like/winged-helix DNA-bi...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 85..101 score: NAcoord: 110..130 score
None	No IPR available	SEG	seg	seg	coord: 35..49 score: NAcoord: 67..79 score
None	No IPR available	PANTHER	PTHR11467	HISTONE H1/H5	coord: 3..185 score: 5
None	No IPR available	SEG	seg	seg	coord: 11..48 score: NAcoord: 155..192 score
None	No IPR available	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 46..128 score: 1.4
None	No IPR available	SEG	seg	seg	coord: 5..17 score: NAcoord: 35..49 score
None	No IPR available	SEG	seg	seg	coord: 14..27 score: NAcoord: 36..55 score
None	No IPR available	SEG	seg	seg	coord: 13..52 score: NAcoord: 59..71 score
None	No IPR available	SEG	seg	seg	coord: 46..63 score: NAcoord: 66..88 score: NAcoord: 91..113 score: NAcoord: 116..146 score
IPR005818	Histone H1/H5	PFAM	PF00538	Linker_histone	coord: 51..121 score: 3.4
IPR005818	Histone H1/H5	SMART	SM00526	no description	coord: 49..116 score: 1.3
IPR005819	Histone H5	PRINTS	PR00624	HISTONEH5	coord: 38..59 score: 3.6e-09coord: 65..82 score: 3.6e-09coord: 173..190 score: 3.6
IPR011991	Winged helix-turn-helix transcription repressor DNA-binding	GENE3D	1.10.10.10	no description	coord: 48..128 score: 3.3

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig3070 ID=Cicer_arietinum_v1_Contig3070; Name=Cicer_arietinum_v1_Contig3070; organism=Cicer arietinum; type=contig; length=1192bp
GGCTGCAGGTTTTTTTTAATGCAAATCAAAATCTCATTATATATCATTGA
TTCAACTCTCATGTTTATTCATTACACGTTATTTCTGTTTAATAAATACA
CAAATAGAAAAAATCTAATAGACATAGGATTGCAGTACTTATTACACATA
ACATCAAACATGGCTTCATGCAGCAGCAACTGGCTCTTCATTGATGCAGT
GTGCTTCCTCGTTCAAATGCTCGTTGAAGCCACATTTACTGTCCATAAGA
TCACCACCACAACCACCGCATCCTCCACCACAGCCTCCACCACACCCACT
ACTCTTCTTCATGCTGTCATTTTCATATCCTCCACTCTCCACCATGTTTC
CACACCCTCCTCCACAACCTCCACACCCTCCACCACAACGTTTGATTAGT
TATGTCTGCTGCCGGAGAAGTTGATGCTCCCGCCGTTGAACAACCGGTGG
AGGAGGTGAAAGCGGCGGAGGAACCTAAACCTGTGAAGGAAAAGAAACCA
AAAGCTTCAAAAGAGAAGAAGAAACCTAAACAGGCCAAAACAGCTTCACA
TCCTCCATATTTTCAGATGATTAAGGAGGCTTTGTTGGCTCTGAACGAGA
AAGGCGGTTCAAGCCCTTACGCTATAGCAAAATACATGGAGGAGAAGCAT
AAATCAGCGCTACCAGCGAATTTCAAGAAGATGCTGAGTTTGCAGCTTAA
GAATCAAGCCGCGAAAGGGAAGCTGGTGAAGATCAAGGCTTCGTATAAAC
TATCTGAAGCCGCGAAGCCGAAGAAGGAAGTTACGGCTAAGGTTACGAAG
GCTAACGCGGCGGAGAAGAAGCAAGAAGGGTCGAAGAGAAAAAGAAACGT
AGTTGCGACGAAGAGTGGTAAGAAAAAAGAGGCGGTTAAGAAGGTTGTGA
AGAAGAAGAGTAAGAAGGTTACTGGGCCTGCGAAGCCCAAACAGCCCAAG
TCCATTAAGTCTCCTTCTAAGAGGGCTAGAAGAGCTACTGCCTGAAGTTT
GATTATGATAATTAATAACTGAAACTATGTAATATATAACTATATGTAAA
TATGAAAACAAACTAGTATGCTCTTTCTTTTTCTCTAGTCTTTTTCTAGA
CTGTAGTTCTCGCAGCTGAGCTCGCTGTATATTGCATAATGTAATATTGT
TTAGAAACCTGCTTTTGCATTTTGTGTTGCTTTTGTTCTTGT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR005818	Histone_H1/H5_H15
IPR005819	H1/H5
IPR011991	ArsR-like_HTH

Search form

Cicer_arietinum_v1_Contig3070