Cicer_arietinum_v1_Contig3103

Contig Overview
NameCicer_arietinum_v1_Contig3103
Unique NameCicer_arietinum_v1_Contig3103
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length497
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FD449522ESTFD449522:178..353 +
FE672628ESTFE672628:1..467 +
FE669774ESTFE669774:1..497 +
ES560233ESTES560233:39..482 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FD449522FD449522Cicer arietinumEST
FE672628FE672628Cicer arietinumEST
FE669774FE669774Cicer arietinumEST
ES560233ES560233Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig3103 vs. SwissProt
Match: LIRP1_ORYSJ (Light-regulated protein OS=Oryza sativa subsp. japonica GN=LIR1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.386e-20
Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 3
Query:   93 APRYTAVKVATGNS----DTPTVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPK-ASENIEREYLDYNDPKTVFQAEACDDLGGTFCE 374
            APR  A++V    +    +   VDY+S  SVFP EAC+ +GGEAC   MYPE KL   A     + A+E ++R+YL Y++P TVF  EACDDLGG FC+
Sbjct:   28 APRRVALRVRAAAAAVAVEAAEVDYSSNISVFPMEACDLIGGEACNVQMYPEAKLSSSAAVAVSRAAAEEVDRDYLSYDEPTTVFPEEACDDLGGEFCK 126          
BLAST of Cicer_arietinum_v1_Contig3103 vs. TrEMBL
Match: B0L633_CICAR (GA-like protein (Fragment) OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 9.714e-73
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 3
Query:    3 TFAPTTTFVPLTAPKSVSHLTTTSFPTKLIAPRYTAVKVATGNSDTPTVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPKASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 398
            TFAPTTTFVPLTAPKSVSHLTTTSFPTKLIAPRYTAVKVATGNSDTPTVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPKASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQKGVY
Sbjct:    4 TFAPTTTFVPLTAPKSVSHLTTTSFPTKLIAPRYTAVKVATGNSDTPTVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPKASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 135          
BLAST of Cicer_arietinum_v1_Contig3103 vs. TrEMBL
Match: B7FGR7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.966e-57
Identity = 116/140 (82.86%), Postives = 121/140 (86.43%), Query Frame = 3
Query:    3 TFAPTTTFVPLTAPKSVSHLTTT-SFPTKLIA-----PRYTAVKVATGNSDTPTVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPK--ASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 398
            TFA TTTFVPLT PKS+SHL T  SFPTKLIA     PRYTA+KV T NSD  TVDYNSAFSVFPAEACETVGG+ACLADM PEVKLQPEA+NDTPK  AS NIEREYLDYN+PKTVFQAEACDDLGG FCEPDYQKGVY
Sbjct:    6 TFA-TTTFVPLTTPKSISHLATNLSFPTKLIASRSSPPRYTAIKVVTDNSDPSTVDYNSAFSVFPAEACETVGGDACLADMNPEVKLQPEARNDTPKTAASGNIEREYLDYNEPKTVFQAEACDDLGGAFCEPDYQKGVY 144          
BLAST of Cicer_arietinum_v1_Contig3103 vs. TrEMBL
Match: Q41016_PEA (GA protein OS=Pisum sativum GN=GA PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.010e-53
Identity = 108/139 (77.70%), Postives = 114/139 (82.01%), Query Frame = 3
Query:    3 TFAPTTTFVPLTAPKSVSHLTTTSFPTKLIA-----PRYTAVKVATGNSDTPTVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPK--ASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 398
            TFA T T VPLT PKSVSHLT   FPTK  A     PRYTA+KVA+GNSD  TV+YNSAFSVF  EACE  GGEACLADMYPEVKLQPE  ND PK  ASENI+R+YL+YNDPKTVFQAEACDDLGGTFCEPDYQKGVY
Sbjct:    6 TFAATITVVPLTTPKSVSHLTI--FPTKFTASRASPPRYTAIKVASGNSDPATVNYNSAFSVFQLEACERFGGEACLADMYPEVKLQPERSNDAPKTAASENIDRDYLEYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 142          
BLAST of Cicer_arietinum_v1_Contig3103 vs. TrEMBL
Match: C6SXC7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.702e-43
Identity = 94/137 (68.61%), Postives = 108/137 (78.83%), Query Frame = 3
Query:    3 TFAPTTTFVPLTAPKSVSHLTTTSFPTKLIAPR----YTAVKVATGNSDTPTVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPK-ASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 398
            TFA     VPL   KSVSH+T   FPTKL APR    Y+ ++VAT   DT TVDYNSAFSVFPAEACETVGGEA +A+MYPE KLQPEAK  TP+  +EN+EREYL+Y++PKTVF+ EACDDLGGTFCE +YQKGVY
Sbjct:    6 TFAAPNV-VPLAPTKSVSHITI--FPTKLKAPRSSPRYSPIRVATVEPDTSTVDYNSAFSVFPAEACETVGGEAGMAEMYPETKLQPEAK--TPRVVTENVEREYLEYDEPKTVFRGEACDDLGGTFCETEYQKGVY 137          
BLAST of Cicer_arietinum_v1_Contig3103 vs. TrEMBL
Match: C6T930_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.334e-42
Identity = 93/137 (67.88%), Postives = 105/137 (76.64%), Query Frame = 3
Query:    3 TFAPTTTFVPLTAPKSVSHLTTTSFPTKLIAPR----YTAVKVATGNSDTPTVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPK-ASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 398
            TFA     VPL   KS SH+    FPT L APR    Y+ + VA    DT TVDYNSAFSVFPAEACETVGGEAC+A+MYPEVKLQPEAK  TP+  +EN+EREYL+Y+DPKTVF+ EACDDLGGTFCE +YQKGVY
Sbjct:    6 TFAAPNV-VPLAQTKSFSHVAI--FPTNLKAPRSSPRYSPIGVAIVEPDTSTVDYNSAFSVFPAEACETVGGEACMAEMYPEVKLQPEAK--TPRVVTENVEREYLEYDDPKTVFRGEACDDLGGTFCETEYQKGVY 137          
BLAST of Cicer_arietinum_v1_Contig3103 vs. TrEMBL
Match: Q84N27_9ROSI (CCR protein OS=x Citrofortunella mitis PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.487e-38
Identity = 83/131 (63.36%), Postives = 97/131 (74.05%), Query Frame = 3
Query:   18 TTFVPLTAPKSVSHLT--TTSFPTKLIAPRYTAVKVATGNSDTP-TVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDT-PKASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 398
            TT VPLT  K+ S +   T       +A R +A+KVA   S+ P T DYNSAFSVFPAEACE +GG+AC A+MYPE KL+PEAKNDT   ASE IEREYL+YND  TVF+ EACDDLGGTFCE +YQ+GVY
Sbjct:   10 TTLVPLTTSKNFSQVAIYTPKLVGSSLASRRSAIKVAATTSNDPSTFDYNSAFSVFPAEACEVIGGDACSAEMYPEAKLKPEAKNDTSTTASEPIEREYLEYNDTNTVFKGEACDDLGGTFCEREYQRGVY 140          
BLAST of Cicer_arietinum_v1_Contig3103 vs. TrEMBL
Match: Q7M1K1_CITPA (Ccr protein OS=Citrus paradisi PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.763e-35
Identity = 81/132 (61.36%), Postives = 96/132 (72.73%), Query Frame = 3
Query:   18 TTFVPLTAPKSVSH--LTTTSFPTKLIAPRYTAVKVATGNSDTP-TVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDT-PKASENIEREYLDYNDPKTVFQAEACDDLGGTFCE-PDYQKGVY 398
            TT VPLT  K+ S   ++T       +A R +A+KVA   S+ P T DYNSAFSVFPAEACE +GG+AC A+MYPE KL+PEAKNDT   ASE IEREYL+YND  TVF+ EACDDLGGTFCE    ++GVY
Sbjct:   28 TTLVPLTTSKNFSQVAISTPKLVGSSLASRRSAIKVAATTSNDPSTFDYNSAFSVFPAEACEVIGGDACSAEMYPEAKLKPEAKNDTSTTASEPIEREYLEYNDTNTVFKGEACDDLGGTFCETASTREGVY 159          
BLAST of Cicer_arietinum_v1_Contig3103 vs. TrEMBL
Match: D7SVI1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_68.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032993001 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.734e-32
Identity = 75/135 (55.56%), Postives = 95/135 (70.37%), Query Frame = 3
Query:    6 FAPTTTFVPLTAPKSVSHLTTTSFPTKL---IAPRYTAVKVATGNSDTPTVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPK-ASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 398
            FAPT   +PLT  ++ +   ++S P KL   +  R   +K A    D+ TVDYNS  SVFPAEAC+ +GGEACLAD YPEV+L+ EA+N   + ASE  ER+Y +YND KTVF+AEACDDLGG FCE +YQ+GVY
Sbjct:    7 FAPT--LLPLTPSRNFATPASSS-PPKLATSLTSRRPPIKAAAAAYDSSTVDYNSMTSVFPAEACDVIGGEACLADCYPEVRLKQEARNRAARTASEVTERDYYEYNDAKTVFRAEACDDLGGLFCEREYQRGVY 138          
BLAST of Cicer_arietinum_v1_Contig3103 vs. TrEMBL
Match: Q39636_CUCSA (CR9 protein OS=Cucumis sativus GN=CR9 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.087e-31
Identity = 70/130 (53.85%), Postives = 87/130 (66.92%), Query Frame = 3
Query:    9 APTTTFVPLTAPKSVSHLTTTSFPTKLIAPRYTAVKVATGNSDTPTVDYNSAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPKASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 398
            +P+ + +P TA      + T S P +  +      K +    D  TVDY+S  SVFPAEAC+TVGGEAC  +MYPEVKL+PEAK      +E +EREYL Y+ PKTVF AEACDDLGG FC+P+YQKGVY
Sbjct:   11 SPSCSLLPPTAKSMAFSIPTRSMPRQ--SKGTLKAKASAVGQDPSTVDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGN-SVTEPVEREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY 137          
BLAST of Cicer_arietinum_v1_Contig3103 vs. TrEMBL
Match: A8IXK8_BRACM (Light regulated protein-like protein OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.201e-30
Identity = 71/130 (54.62%), Postives = 90/130 (69.23%), Query Frame = 3
Query:   21 TFVPLTAPKSV---SHLTTTSFPTKLIAPRYTAVKVATGNSDTPTVDYN-SAFSVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPKASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQKGVY 398
            T +PL++PK         +T+ P++L + R+     +   SD  TVDYN S  SVFPAEACE + G AC AD+YPEVKL+ +  +  P ASE ++REYL+YN+PKTVF AEACDDLGG FCEPDYQK VY
Sbjct:   10 TILPLSSPKLTLLPPQTISTTKPSRLSSLRFRPNSSSPSTSDPLTVDYNDSPLSVFPAEACEVISGYACSADIYPEVKLETKPVSP-PVASEPVDREYLEYNNPKTVFPAEACDDLGGEFCEPDYQKDVY 138          
BLAST of Cicer_arietinum_v1_Contig3103 vs. TAIR peptide
Match: AT3G26740.1 (| Symbols: CCL | CCR-like | chr3:9827868-9828461 FORWARD LENGTH=141)

HSP 1 Score: 117.087 bits (292), Expect = 5.075e-27
Identity = 67/135 (49.63%), Postives = 84/135 (62.22%), Query Frame = 3
Query:    6 FAPTTTFVPLTAPKSVSHLTTTSFPTKLIAPRYTAVKVATGNS------DTPTVDYNSAF-SVFPAEACETVGGEACLADMYPEVKLQPEAKNDTPKASENIEREYLDYNDPKTVFQAEACDDLGGTFCEPDYQK 389
            F   T  +PL +  S   LT    P    A R ++++    +S      D  TVDYNS+  SVFPAEACE + G AC AD+YPEVKL  +  +  P ASE ++REY +YN PKTVF+ EACDDLGG FCEPD+QK
Sbjct:    6 FIKPTILLPLPSSVSSPKLTFL-LPHATKASRLSSLRSNNSSSSSSLTSDPNTVDYNSSILSVFPAEACEVISGYACSADIYPEVKLDTKPVS-RPVASEPVDREYEEYNSPKTVFREEACDDLGGEFCEPDFQK 138          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig3103 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
LIRP1_ORYSJ6.386e-2048.48Light-regulated protein OS=Oryza sativa subsp. jap... [more]
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BLAST of Cicer_arietinum_v1_Contig3103 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B0L633_CICAR9.714e-73100.00GA-like protein (Fragment) OS=Cicer arietinum PE=2... [more]
B7FGR7_MEDTR1.966e-5782.86Putative uncharacterized protein OS=Medicago trunc... [more]
Q41016_PEA1.010e-5377.70GA protein OS=Pisum sativum GN=GA PE=2 SV=1[more]
C6SXC7_SOYBN4.702e-4368.61Putative uncharacterized protein OS=Glycine max PE... [more]
C6T930_SOYBN2.334e-4267.88Putative uncharacterized protein OS=Glycine max PE... [more]
Q84N27_9ROSI3.487e-3863.36CCR protein OS=x Citrofortunella mitis PE=2 SV=1[more]
Q7M1K1_CITPA2.763e-3561.36Ccr protein OS=Citrus paradisi PE=4 SV=1[more]
D7SVI1_VITVI3.734e-3255.56Whole genome shotgun sequence of line PN40024, sca... [more]
Q39636_CUCSA1.087e-3153.85CR9 protein OS=Cucumis sativus GN=CR9 PE=2 SV=1[more]
A8IXK8_BRACM1.201e-3054.62Light regulated protein-like protein OS=Brassica c... [more]
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BLAST of Cicer_arietinum_v1_Contig3103 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G26740.15.075e-2749.63| Symbols: CCL | CCR-like | chr3:9827868-9828461 F... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009856Light regulated Lir1PFAMPF07207Lir1coord: 2..126
score: 1.1

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig3103 ID=Cicer_arietinum_v1_Contig3103; Name=Cicer_arietinum_v1_Contig3103; organism=Cicer arietinum; type=contig; length=497bp
TAACCTTTGCACCCACCACCACCTTTGTGCCTTTGACTGCACCAAAGAGT
GTCTCACATCTAACTACTACTAGTTTCCCTACCAAATTGATTGCACCTCG
TTACACTGCAGTCAAAGTTGCTACCGGGAATTCTGACACACCAACAGTTG
ATTACAACTCTGCATTCTCAGTGTTTCCAGCTGAGGCGTGTGAAACAGTT
GGAGGGGAAGCATGTTTAGCAGACATGTATCCTGAAGTGAAGCTACAACC
AGAGGCAAAGAATGACACACCAAAGGCTTCAGAAAACATTGAGAGAGAAT
ATCTTGATTACAATGACCCTAAGACGGTTTTCCAAGCAGAGGCTTGTGAT
GATCTTGGAGGAACTTTCTGTGAGCCTGATTATCAAAAGGGTGTCTACTA
GAAGATAATGGAAAAACCCTCTTATTGCCATGAATATTGTTGAATACTAC
GTTGTCATGTGTGTAATTGTAGTATGGGTTGTACATATATAAAATGA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR009856Lir1