Cicer_arietinum_v1_Contig3350

Contig Overview


Name	Cicer_arietinum_v1_Contig3350
Unique Name	Cicer_arietinum_v1_Contig3350
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	592

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
FE670704	EST	FE670704:1..393 +	Cicer arietinum unigene v1	n/a
GR406177	EST	GR406177:26..479 +	Cicer arietinum unigene v1	n/a
HO067163	EST	HO067163:194..592 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
FE670704	FE670704	Cicer arietinum	EST
GR406177	GR406177	Cicer arietinum	EST
HO067163	HO067163	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
Match: RLA2B_MAIZE (60S acidic ribosomal protein P2B OS=Zea mays GN=RPP2B PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.604e-19
Identity = 53/113 (46.90%), Postives = 65/113 (57.52%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MK+IAAYLL+VLGGN+SP+ADDVK IL SVG EA++EK+E LLTE+K KD  E+IA+GRE+L                                         D+DMGFSLFD
Sbjct:    1 MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRERLSSVPSGGGAIDMGAPAAVAGGGAAPAEEAKKEEKVEEKEESDEDMGFSLFD 113

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
Match: RLA2_PARAR (60S acidic ribosomal protein P2 OS=Parthenium argentatum PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.562e-17
Identity = 42/62 (67.74%), Postives = 56/62 (90.32%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK+IAA+LL++LGGN+SP+ +D+K IL SVG +A+D+KIELLL++VKGKD  ELIASGRE+L
Sbjct:    1 MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRERL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
Match: RLA22_ARATH (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana GN=RPP2B PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.734e-17
Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK++AAYLL+VL G +SP++ D+K IL SVG E ED +IELLL EVKGKD AELIA+GREKL
Sbjct:    1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
Match: RLA21_ARATH (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana GN=RPP2A PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.832e-16
Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK++AA+LL+VL G +SP+  D+K IL SVG E ED +IELLL EVKGKD AELIA+GREKL
Sbjct:    1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
Match: RLA2A_MAIZE (60S acidic ribosomal protein P2A OS=Zea mays GN=RPP2A PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 3.699e-16
Identity = 50/113 (44.25%), Postives = 61/113 (53.98%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MK +AAYLL+VL GN+SPSADD+  IL SVG E ++EK+ELLL+++ GKD  ELIA+GREK                                          DDDMGFSLFD
Sbjct:    1 MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGREKF-ASVPCGGGGVAVAAAAPAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 112

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
Match: RLA24_ARATH (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana GN=RPP2D PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.831e-16
Identity = 41/62 (66.13%), Postives = 52/62 (83.87%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK+ AA+LL+VLGGN++PSAD++K I+ +VG + + E IELLL EV GKD AELIASGREKL
Sbjct:    1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
Match: RLA2_BRAFL (60S acidic ribosomal protein P2 OS=Branchiostoma floridae PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.131e-15
Identity = 38/62 (61.29%), Postives = 53/62 (85.48%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            M+ +AAYLL+VLGGN++PSA D+KKIL SVGI+AEDE++  ++ E+KGKD  E++A+GR KL
Sbjct:    1 MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
Match: RLA2_ALTAL (60S acidic ribosomal protein P2 OS=Alternaria alternata GN=ALTA5 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.341e-15
Identity = 47/113 (41.59%), Postives = 60/113 (53.10%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MK +AAYLL  LGGN+SPSA DVK +L SVGIEA+ ++++ L++E++GKD  ELIASG EKL                                         D+DMGF LFD
Sbjct:    1 MKHLAAYLLLGLGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKLASVPSGGAGGAAASGGAAAAGGSAQAEAAPEAAKEEEKEESDEDMGFGLFD 113

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
Match: RLA2_SCHPO (60S acidic ribosomal protein P2-alpha OS=Schizosaccharomyces pombe GN=rpp201 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.905e-14
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK +AAYLL  +GG  SPSA D++ +L +VGIEAE E+IE L+ E+ GKD  ELIA+G EKL
Sbjct:    1 MKYLAAYLLLTVGGKDSPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNEKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
Match: RLA2_EUPRA (60S acidic ribosomal protein P2 OS=Euplotes raikovi PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.007e-13
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK IAAY L VLGGNSSPSADDVKK+L SVG+++E +K++ LL  ++GK   ELI +G  K+
Sbjct:    1 MKYIAAYALLVLGGNSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSSKV 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
Match: B7FMX7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.936e-22
Identity = 62/113 (54.87%), Postives = 68/113 (60.18%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MKIIAAY+L+VLGGNS+PSADD+K IL SVG+EAED  IELLL+EVKGKDFAELIASGREKL                                         DDDMGFSLFD
Sbjct:    1 MKIIAAYMLAVLGGNSAPSADDIKTILSSVGVEAEDSNIELLLSEVKGKDFAELIASGREKLASVPSGGGAVAVAASGGGAAAAAAPAAEAKEEKKVEEKEESDDDMGFSLFD 113

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
Match: D7SN28_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031366001 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.534e-19
Identity = 57/113 (50.44%), Postives = 65/113 (57.52%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MK+IAAYLL+VLGGN+ PSA+D+K IL SVG EA+D++IELLL EVKGKD  ELIASGREKL                                         DDDMGFSLFD
Sbjct:   33 MKVIAAYLLAVLGGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIASGREKLASVPSGGGAAVAVAAPGGGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 145

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
Match: A5AGQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003816 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.534e-19
Identity = 57/113 (50.44%), Postives = 65/113 (57.52%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MK+IAAYLL+VLGGN+ PSA+D+K IL SVG EA+D++IELLL EVKGKD  ELIASGREKL                                         DDDMGFSLFD
Sbjct:    1 MKVIAAYLLAVLGGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIASGREKLASVPSGGGAAVAVAAPGGGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 113

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
Match: Q65WT5_ORYSJ (Os05g0445500 protein OS=Oryza sativa subsp. japonica GN=P0615D12.10 PE=4 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.464e-19
Identity = 53/113 (46.90%), Postives = 65/113 (57.52%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MK+IAAYLL+VLGGN+SPSADD+K IL SVG+EA DE++E LL+E++GKD  E+IA+GREK                                          DDDMGFSLFD
Sbjct:    1 MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVPSGGGGGIAVAAPTAAGGGAAPAEEAKKEEKVEEKEESDDDMGFSLFD 113

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
Match: B9FPV2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_18721 PE=4 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.464e-19
Identity = 53/113 (46.90%), Postives = 65/113 (57.52%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MK+IAAYLL+VLGGN+SPSADD+K IL SVG+EA DE++E LL+E++GKD  E+IA+GREK                                          DDDMGFSLFD
Sbjct:  196 MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVPSGGGGGIAVAAPTAAGGGAAPAEEAKKEEKVEEKEESDDDMGFSLFD 308

HSP 2 Score: 92.8189 bits (229), Expect = 1.876e-17
Identity = 43/61 (70.49%), Postives = 55/61 (90.16%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREK 266
            MK+IAAYLL+VLGGN+SPSADD+K IL SVG+EA DE++E LL+E++GKD  E+IA+GREK
Sbjct:   85 MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREK 145

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
Match: B8AYR2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20141 PE=4 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.464e-19
Identity = 53/113 (46.90%), Postives = 65/113 (57.52%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MK+IAAYLL+VLGGN+SPSADD+K IL SVG+EA DE++E LL+E++GKD  E+IA+GREK                                          DDDMGFSLFD
Sbjct:   76 MKLIAAYLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVPSGGGGGIAVAAPTAAGGGAAPAEEAKKEEKVEEKEESDDDMGFSLFD 188

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
Match: Q8H2B9_PRUDU (60s acidic ribosomal protein OS=Prunus dulcis GN=AL60SRP PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.830e-19
Identity = 54/113 (47.79%), Postives = 66/113 (58.41%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MK++AAYLL+VLGGN++PSA+D+K IL SVG E +D++I+LLL+EVKGKD  ELIASGREKL                                         DDDMGFSLFD
Sbjct:    1 MKVVAAYLLAVLGGNTTPSAEDLKDILGSVGAETDDDRIQLLLSEVKGKDITELIASGREKLASVPSGGGAVAVAAPGAGAGAAAPAAAEPKKEEKVEEKEDTDDDMGFSLFD 113

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
Match: C0PFG6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.830e-19
Identity = 55/123 (44.72%), Postives = 69/123 (56.10%), Query Frame = 3

Query:   54 DLATLPLRSNMKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            D+  +   S MK+IAAYLL+VLGGN+SP+ADDVK IL SVG EA++EK+E LLTE+K KD  E+IA+GRE+L                                         D+DMGFSLFD
Sbjct:   14 DVIGISAVSRMKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRERLSSVPSGGGAIDMGAPAAVAGGGAAPAEEAKKEEKVEEKEESDEDMGFSLFD 136

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
Match: A8QJ72_9ROSI (60S acidic ribosomal protein P2 OS=Juglans regia PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.615e-19
Identity = 54/113 (47.79%), Postives = 65/113 (57.52%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MK++A+YLL+VLGGN++P  DD+K IL SVG EA+D+KIELLL+EVKGKD  ELIA+GREKL                                         DDDMGFSLFD
Sbjct:    1 MKVVASYLLAVLGGNTTPCTDDLKHILGSVGAEADDDKIELLLSEVKGKDITELIAAGREKLASVPSGGGGIAVAAAAGGAPAAAAAAAEPKKEEKVEEKKESDDDMGFSLFD 113

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
Match: B9SSU4_RICCO (60S acidic ribosomal protein P2, putative OS=Ricinus communis GN=RCOM_0792560 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.945e-19
Identity = 54/113 (47.79%), Postives = 68/113 (60.18%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 422
            MKI+AAYLL+VLGGN+SPSA+D+K+IL SVGI+A++++I LLL++VKGKD  ELIA+GREKL                                         DDDMGFSLFD
Sbjct:    1 MKIVAAYLLAVLGGNTSPSAEDLKEILGSVGIDADEDRIGLLLSQVKGKDITELIAAGREKLASVPSGGGVAVAAAAAPAAGGAAAPAAEAKKEEKVEEKEESDDDMGFSLFD 113

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide
Match: AT2G27710.4 (| Symbols: | 60S acidic ribosomal protein family | chr2:11816929-11817670 FORWARD LENGTH=98)

HSP 1 Score: 86.6557 bits (213), Expect = 1.024e-17
Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK++AAYLL+VL G +SP++ D+K IL SVG E ED +IELLL EVKGKD AELIA+GREKL
Sbjct:    1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide
Match: AT2G27710.3 (| Symbols: | 60S acidic ribosomal protein family | chr2:11816929-11817670 FORWARD LENGTH=115)

HSP 1 Score: 86.6557 bits (213), Expect = 1.024e-17
Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK++AAYLL+VL G +SP++ D+K IL SVG E ED +IELLL EVKGKD AELIA+GREKL
Sbjct:    1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide
Match: AT2G27710.2 (| Symbols: | 60S acidic ribosomal protein family | chr2:11816929-11817670 FORWARD LENGTH=115)

HSP 1 Score: 86.6557 bits (213), Expect = 1.024e-17
Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK++AAYLL+VL G +SP++ D+K IL SVG E ED +IELLL EVKGKD AELIA+GREKL
Sbjct:    1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide
Match: AT2G27710.1 (| Symbols: | 60S acidic ribosomal protein family | chr2:11816929-11817670 FORWARD LENGTH=115)

HSP 1 Score: 86.6557 bits (213), Expect = 1.024e-17
Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK++AAYLL+VL G +SP++ D+K IL SVG E ED +IELLL EVKGKD AELIA+GREKL
Sbjct:    1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide
Match: AT2G27720.1 (| Symbols: | 60S acidic ribosomal protein family | chr2:11818696-11819370 FORWARD LENGTH=115)

HSP 1 Score: 85.1149 bits (209), Expect = 2.979e-17
Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK++AA+LL+VL G +SP+  D+K IL SVG E ED +IELLL EVKGKD AELIA+GREKL
Sbjct:    1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide
Match: AT3G44590.1 (| Symbols: | 60S acidic ribosomal protein family | chr3:16163983-16164658 FORWARD LENGTH=111)

HSP 1 Score: 84.3445 bits (207), Expect = 5.081e-17
Identity = 41/62 (66.13%), Postives = 52/62 (83.87%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK+ AA+LL+VLGGN++PSAD++K I+ +VG + + E IELLL EV GKD AELIASGREKL
Sbjct:    1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide
Match: AT3G44590.2 (| Symbols: | 60S acidic ribosomal protein family | chr3:16163983-16164658 FORWARD LENGTH=111)

HSP 1 Score: 84.3445 bits (207), Expect = 5.081e-17
Identity = 41/62 (66.13%), Postives = 52/62 (83.87%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK+ AA+LL+VLGGN++PSAD++K I+ +VG + + E IELLL EV GKD AELIASGREKL
Sbjct:    1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKL 62

[Close]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide
Match: AT2G27720.3 (| Symbols: | 60S acidic ribosomal protein family | chr2:11818696-11819370 FORWARD LENGTH=127)

HSP 1 Score: 76.2554 bits (186), Expect = 1.384e-14
Identity = 42/74 (56.76%), Postives = 51/74 (68.92%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHS------------VGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK++AA+LL+VL G +SP+  D+K IL S            VG E ED +IELLL EVKGKD AELIA+GREKL
Sbjct:    1 MKVVAAFLLAVLSGKASPTTGDIKDILGSGIMVLVLDCVVIVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 74

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BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide
Match: AT3G28500.1 (| Symbols: | 60S acidic ribosomal protein family | chr3:10682204-10682551 FORWARD LENGTH=115)

HSP 1 Score: 74.7146 bits (182), Expect = 4.026e-14
Identity = 35/62 (56.45%), Postives = 50/62 (80.65%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHSVGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK+IAA+LL+ LGGN +P+++D+KKIL SVG E ++ KI+LL + +K  D  ELIA+GREK+
Sbjct:    1 MKVIAAFLLAKLGGNENPTSNDLKKILESVGAEIDETKIDLLFSLIKDHDVTELIAAGREKM 62

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BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide
Match: AT2G27720.2 (| Symbols: | 60S acidic ribosomal protein family | chr2:11818696-11819370 FORWARD LENGTH=130)

HSP 1 Score: 73.1738 bits (178), Expect = 1.171e-13
Identity = 41/77 (53.25%), Postives = 50/77 (64.94%), Query Frame = 3

Query:   84 MKIIAAYLLSVLGGNSSPSADDVKKILHS---------------VGIEAEDEKIELLLTEVKGKDFAELIASGREKL 269
            MK++AA+LL+VL G +SP+  D+K IL S                G E ED +IELLL EVKGKD AELIA+GREKL
Sbjct:    1 MKVVAAFLLAVLSGKASPTTGDIKDILGSGIMVLVLDCVVIGDCFGAETEDSQIELLLKEVKGKDLAELIAAGREKL 77

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig3350 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RLA2B_MAIZE	1.604e-19	46.90	60S acidic ribosomal protein P2B OS=Zea mays GN=RP...	[more]
RLA2_PARAR	2.562e-17	67.74	60S acidic ribosomal protein P2 OS=Parthenium arge...	[more]
RLA22_ARATH	9.734e-17	69.35	60S acidic ribosomal protein P2-2 OS=Arabidopsis t...	[more]
RLA21_ARATH	2.832e-16	67.74	60S acidic ribosomal protein P2-1 OS=Arabidopsis t...	[more]
RLA2A_MAIZE	3.699e-16	44.25	60S acidic ribosomal protein P2A OS=Zea mays GN=RP...	[more]
RLA24_ARATH	4.831e-16	66.13	60S acidic ribosomal protein P2-4 OS=Arabidopsis t...	[more]
RLA2_BRAFL	3.131e-15	61.29	60S acidic ribosomal protein P2 OS=Branchiostoma f...	[more]
RLA2_ALTAL	5.341e-15	41.59	60S acidic ribosomal protein P2 OS=Alternaria alte...	[more]
RLA2_SCHPO	5.905e-14	59.68	60S acidic ribosomal protein P2-alpha OS=Schizosac...	[more]
RLA2_EUPRA	1.007e-13	59.68	60S acidic ribosomal protein P2 OS=Euplotes raikov...	[more]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FMX7_MEDTR	1.936e-22	54.87	Putative uncharacterized protein OS=Medicago trunc...	[more]
D7SN28_VITVI	1.534e-19	50.44	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AGQ2_VITVI	1.534e-19	50.44	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q65WT5_ORYSJ	4.464e-19	46.90	Os05g0445500 protein OS=Oryza sativa subsp. japoni...	[more]
B9FPV2_ORYSJ	4.464e-19	46.90	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8AYR2_ORYSI	4.464e-19	46.90	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q8H2B9_PRUDU	5.830e-19	47.79	60s acidic ribosomal protein OS=Prunus dulcis GN=A...	[more]
C0PFG6_MAIZE	5.830e-19	44.72	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
A8QJ72_9ROSI	7.615e-19	47.79	60S acidic ribosomal protein P2 OS=Juglans regia P...	[more]
B9SSU4_RICCO	9.945e-19	47.79	60S acidic ribosomal protein P2, putative OS=Ricin...	[more]

BLAST of Cicer_arietinum_v1_Contig3350 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT2G27710.4	1.024e-17	69.35	\| Symbols: \| 60S acidic ribosomal protein family ...	[more]
AT2G27710.3	1.024e-17	69.35	\| Symbols: \| 60S acidic ribosomal protein family ...	[more]
AT2G27710.2	1.024e-17	69.35	\| Symbols: \| 60S acidic ribosomal protein family ...	[more]
AT2G27710.1	1.024e-17	69.35	\| Symbols: \| 60S acidic ribosomal protein family ...	[more]
AT2G27720.1	2.979e-17	67.74	\| Symbols: \| 60S acidic ribosomal protein family ...	[more]
AT3G44590.1	5.081e-17	66.13	\| Symbols: \| 60S acidic ribosomal protein family ...	[more]
AT3G44590.2	5.081e-17	66.13	\| Symbols: \| 60S acidic ribosomal protein family ...	[more]
AT2G27720.3	1.384e-14	56.76	\| Symbols: \| 60S acidic ribosomal protein family ...	[more]
AT3G28500.1	4.026e-14	56.45	\| Symbols: \| 60S acidic ribosomal protein family ...	[more]
AT2G27720.2	1.171e-13	53.25	\| Symbols: \| 60S acidic ribosomal protein family ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 20..46 score: NAcoord: 47..58 score
None	No IPR available	PANTHER	PTHR21141	60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER	coord: 13..123 score: 2.6
None	No IPR available	PANTHER	PTHR21141:SF5	60S ACIDIC RIBOSOMAL PROTEIN P2	coord: 13..123 score: 2.6
None	No IPR available	SEG	seg	seg	coord: 75..115 score
None	No IPR available	SEG	seg	seg	coord: 18..43 score
None	No IPR available	SEG	seg	seg	coord: 8..50 score: NAcoord: 69..82 score
IPR001813	Ribosomal protein 60S	PFAM	PF00428	Ribosomal_60s	coord: 29..124 score: 4

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig3350 ID=Cicer_arietinum_v1_Contig3350; Name=Cicer_arietinum_v1_Contig3350; organism=Cicer arietinum; type=contig; length=592bp
CACCCGGGCTGCAGGATTCGAATTCCTCTCTGGTGTCAAAACCCTAACAT
CCAGATCTCGCTACTCTTCCATTACGATCAAATATGAAGATCATCGCTGC
TTACTTGTTGTCTGTATTGGGAGGTAACTCATCCCCTTCAGCCGATGATG
TTAAAAAAATTCTCCACTCAGTTGGAATTGAGGCAGAAGATGAGAAGATT
GAGCTTCTCCTAACTGAAGTTAAGGGAAAAGATTTTGCCGAGCTTATTGC
TAGTGGAAGAGAAAAGTTGTCTTCAGTTCCTTCTGGTGGTGGTGCTGTTG
CTGTTTCTGCTGCACCTGCCGGAGGTGCTGCAGCTGCCGCACCTGCTGCT
GAAGCAAAGGAGGAGAAGAAGGTCGAAGAAAAGGAAGAATCCGATGATGA
TATGGGATTCAGCTTATTCGACTAAAAGGTCTGAAATTTGTGTTAGACAT
TTGTGGTTCTAGTTATAGTTTTAGTGAAAATCNCAAGGTTTTGATTCTTG
ATTTATATATTGTATTTTGTTTTATGGATTTTGCTTTTTTTGATGGAGAC
AATGTAAGCTACTTGAGTTTAGTAATCTTTTGAATTTAAGCG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006414	translational elongation

Vocabulary: **INTERPRO**
Term	Definition
IPR001813	Ribosomal protein 60S

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Cicer_arietinum_v1_Contig3350