Cicer_arietinum_v1_Contig341

Contig Overview
NameCicer_arietinum_v1_Contig341
Unique NameCicer_arietinum_v1_Contig341
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length769
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
HO063900ESTHO063900:1..399 +
CD051302ESTCD051302:180..415 +
FL519003ESTFL519003:182..413 +
HO067806ESTHO067806:199..720 -
HO062423ESTHO062423:215..713 +
HO063429ESTHO063429:378..713 -
HO063436ESTHO063436:181..768 -
HO063263ESTHO063263:356..746 +
GR397036ESTGR397036:270..769 -
HO063728ESTHO063728:382..745 -
GR400031ESTGR400031:393..737 -
HO062251ESTHO062251:464..733 +
GR396033ESTGR396033:393..737 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO063900HO063900Cicer arietinumEST
CD051302CD051302Cicer arietinumEST
FL519003FL519003Cicer arietinumEST
HO067806HO067806Cicer arietinumEST
HO062423HO062423Cicer arietinumEST
HO063429HO063429Cicer arietinumEST
HO063436HO063436Cicer arietinumEST
HO063263HO063263Cicer arietinumEST
GR397036GR397036Cicer arietinumEST
HO063728HO063728Cicer arietinumEST
GR400031GR400031Cicer arietinumEST
HO062251HO062251Cicer arietinumEST
GR396033GR396033Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TrEMBL
Match: C6TNS5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.907e-20
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 3 
Query:   39 VPYSPLGRGFFGGKAITESIPANSFLAIQPRLQGENFDKNKIFYSRMEKLAEKY 200
            VPYSPLGRGFFGGKA+ ESIPANSFLA QPRL+GENFDKNKI YSR+EKLAEKY
Sbjct:  204 VPYSPLGRGFFGGKAVVESIPANSFLAFQPRLRGENFDKNKILYSRIEKLAEKY 257
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TrEMBL
Match: D7TUK7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021820001 PE=4 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.743e-17
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 3 
Query:   39 VPYSPLGRGFFGGKAITESIPANSFLAIQPRLQGENFDKNKIFYSRMEKLAEKYEGT 209
            VPYSPLGRGFFGGKA+ E++PANSFL   PR QGENF+KNKI Y++ME LAEKY  T
Sbjct:  207 VPYSPLGRGFFGGKAVDENVPANSFLRSIPRFQGENFEKNKIIYTKMEMLAEKYRCT 263
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TrEMBL
Match: A5B174_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025505 PE=4 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.743e-17
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 3 
Query:   39 VPYSPLGRGFFGGKAITESIPANSFLAIQPRLQGENFDKNKIFYSRMEKLAEKYEGT 209
            VPYSPLGRGFFGGKA+ E++PANSFL   PR QGENF+KNKI Y++ME LAEKY  T
Sbjct:  695 VPYSPLGRGFFGGKAVDENVPANSFLRSIPRFQGENFEKNKIIYTKMEMLAEKYRCT 751
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TrEMBL
Match: D7TUJ9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021809001 PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.862e-16
Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 3 
Query:   39 VPYSPLGRGFFGGKAITESIPANSFLAIQPRLQGENFDKNKIFYSRMEKLAEKY 200
            VPYSPLGRGFFGGKA++E++PANS L   PR QGENF+KNKI Y++ME LAEK+
Sbjct:  207 VPYSPLGRGFFGGKAVSENVPANSLLRSNPRFQGENFEKNKIIYTKMEMLAEKH 260
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TrEMBL
Match: C6TDX4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.083e-15
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 3 
Query:   39 VPYSPLGRGFFGGKAITESIPANSFLAIQPRLQGENFDKNKIFYSRMEKLAEKY 200
            VP+SPLGRGFF GK + ESIPA+S+LAIQPR QG+  DKNK FY RMEKLAEK+
Sbjct:  203 VPFSPLGRGFFDGKGVIESIPADSYLAIQPRFQGQKLDKNKTFYFRMEKLAEKH 256
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TrEMBL
Match: D7TUK5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021816001 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.413e-15
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 3 
Query:   39 VPYSPLGRGFFGGKAITESIPANSFLAIQPRLQGENFDKNKIFYSRMEKLAEKYEGT 209
            VPYSPLGRGFFGGKA  E++PANSFL   PR QGENF+KNK+ Y+++E LAEK+  T
Sbjct:  240 VPYSPLGRGFFGGKAAGENLPANSFLRSNPRFQGENFEKNKLLYAKIEMLAEKHRCT 296
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TrEMBL
Match: D7TUJ8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021808001 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.413e-15
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 3 
Query:   39 VPYSPLGRGFFGGKAITESIPANSFLAIQPRLQGENFDKNKIFYSRMEKLAEKYEGT 209
            VPYSPLGRGFFGGKA  E++PANSFL   PR QGENF+KNK+ Y+++E LAEK+  T
Sbjct:  205 VPYSPLGRGFFGGKAAGENLPANSFLRSNPRFQGENFEKNKLLYAKIEMLAEKHRCT 261
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TrEMBL
Match: A5BYS5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000848 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.413e-15
Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 3 
Query:   39 VPYSPLGRGFFGGKAITESIPANSFLAIQPRLQGENFDKNKIFYSRMEKLAEKYEGT 209
            VPYSPLGRGFFGGKA  E++PANSFL   PR QGENF+KNK+ Y+++E LAEK+  T
Sbjct:  233 VPYSPLGRGFFGGKAAGENLPANSFLRSNPRFQGENFEKNKLLYAKIETLAEKHRCT 289
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TrEMBL
Match: D7TUK6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021818001 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.116e-15
Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = 3 
Query:   39 VPYSPLGRGFFGGKAITESIPANSFLAIQPRLQGENFDKNKIFYSRMEKLAEKYEGT 209
            VPYSPLGRGFFGGK + E+ PAN+FL + PR QGENF+KNK  Y++ME LAEK+  T
Sbjct:  207 VPYSPLGRGFFGGKVVDENAPANTFLRLNPRFQGENFEKNKNIYTKMEMLAEKHRCT 263
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TrEMBL
Match: D7TUK1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021812001 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.116e-15
Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = 3 
Query:   39 VPYSPLGRGFFGGKAITESIPANSFLAIQPRLQGENFDKNKIFYSRMEKLAEKYEGT 209
            VPYSPLGRGFFGGK + E+ PAN+FL + PR QGENF+KNK  Y++ME LAEK+  T
Sbjct:  212 VPYSPLGRGFFGGKVVDENAPANTFLRLNPRFQGENFEKNKNIYTKMEMLAEKHRCT 268
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TAIR peptide
Match: AT5G63350.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48510.1); Has 103 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:25380216-25381124 REVERSE LENGTH=302)

HSP 1 Score: 54.299 bits (129), Expect = 8.725e-8
Identity = 23/28 (82.14%), Postives = 25/28 (89.29%), Query Frame = 1 
Query:  196 SMKVPCDVWRMESGGFAWRLDVKAALSL 279
            S+ VPCDVWRM+ GGFAWRLDVKAAL L
Sbjct:  275 SVTVPCDVWRMDGGGFAWRLDVKAALCL 302
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TAIR peptide
Match: AT3G27250.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40800.1); Has 104 Blast hits to 104 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:10061633-10062481 FORWARD LENGTH=282)

HSP 1 Score: 53.9138 bits (128), Expect = 1.140e-7
Identity = 23/36 (63.89%), Postives = 27/36 (75.00%), Query Frame = 1 
Query:  178 WKSWQRSMKVPCDVWRMESGGFAWRLDVKAALSLRL 285
            WK  + +  VPCDVW+ME GGFAWRLD  AAL+L L
Sbjct:  247 WKETKYTKTVPCDVWKMEFGGFAWRLDTTAALTLWL 282
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TAIR peptide
Match: AT1G60690.1 (| Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr1:22349892-22351668 REVERSE LENGTH=345)

HSP 1 Score: 53.5286 bits (127), Expect = 1.479e-7
Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 3 
Query:   39 VPYSPLGRGFFG-GKAITESIPANSFLAIQPRLQGENFDKNKIFYSRMEKLAEK 197
            V YSPLGRGFF  G  + E++  N F    PR Q EN D NKI Y ++  ++EK
Sbjct:  206 VSYSPLGRGFFASGPKLVENLDNNDFRKALPRFQQENLDHNKILYEKVSAMSEK 259
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TAIR peptide
Match: AT5G40790.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16330115-16331026 REVERSE LENGTH=303)

HSP 1 Score: 53.1434 bits (126), Expect = 1.944e-7
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 1 
Query:  175 EWKSWQRSMKVPCDVWRMESGGFAWRLDVKAALSL 279
            E  +W R M VPCDVWR+ SGGFAWRLDV++AL L
Sbjct:  268 EPSTW-RKMTVPCDVWRIRSGGFAWRLDVESALRL 301
[Close]
BLAST of Cicer_arietinum_v1_Contig341 vs. TAIR peptide
Match: AT5G40800.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16334810-16335628 REVERSE LENGTH=272)

HSP 1 Score: 51.6026 bits (122), Expect = 5.656e-7
Identity = 21/36 (58.33%), Postives = 27/36 (75.00%), Query Frame = 1 
Query:  178 WKSWQRSMKVPCDVWRMESGGFAWRLDVKAALSLRL 285
            W+  + +  +PCDVW+ME GGFAWRLD  AAL+L L
Sbjct:  237 WRETKYTKTLPCDVWKMEFGGFAWRLDTTAALTLWL 272
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig341 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TNS5_SOYBN1.907e-2088.89Putative uncharacterized protein OS=Glycine max PE... [more]
D7TUK7_VITVI5.743e-1773.68Whole genome shotgun sequence of line PN40024, sca... [more]
A5B174_VITVI5.743e-1773.68Putative uncharacterized protein OS=Vitis vinifera... [more]
D7TUJ9_VITVI4.862e-1672.22Whole genome shotgun sequence of line PN40024, sca... [more]
C6TDX4_SOYBN1.083e-1574.07Putative uncharacterized protein OS=Glycine max PE... [more]
D7TUK5_VITVI2.413e-1568.42Whole genome shotgun sequence of line PN40024, sca... [more]
D7TUJ8_VITVI2.413e-1568.42Whole genome shotgun sequence of line PN40024, sca... [more]
A5BYS5_VITVI2.413e-1568.42Putative uncharacterized protein OS=Vitis vinifera... [more]
D7TUK6_VITVI4.116e-1566.67Whole genome shotgun sequence of line PN40024, sca... [more]
D7TUK1_VITVI4.116e-1566.67Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of Cicer_arietinum_v1_Contig341 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G63350.18.725e-882.14| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT3G27250.11.140e-763.89| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT1G60690.11.479e-748.15| Symbols: | NAD(P)-linked oxidoreductase superfa... [more]
AT5G40790.11.944e-768.57| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT5G40800.15.656e-758.33| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 44..55
score
IPR023210NADP-dependent oxidoreductase domainGENE3D3.20.20.100no descriptioncoord: 13..68
score: 3.8

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig341 ID=Cicer_arietinum_v1_Contig341; Name=Cicer_arietinum_v1_Contig341; organism=Cicer arietinum; type=contig; length=769bp
GGCGGCCGCGGGATTCGATTAGCGTGGTCGCGGCCGAGGTACCATACAGT
CCTCTTGGACGTGGATTTTTCGGAGGCAAGGCCATCACAGAAAGTATACC
TGCAAACAGTTTTCTGGCAATCCAACCAAGGTTACAGGGGGAGAACTTCG
ACAAGAACAAGATATTTTATTCTCGAATGGAAAAGTTGGCAGAGAAGTAT
GAAGGTACCTTGTGATGTGTGGAGAATGGAGAGTGGTGGGTTTGCATGGA
GATTAGATGTCAAAGCTGCTCTCAGCTTGAGATTAGGTTGCTAATTAGTT
ACAATCATAATCAATTCTCAATCTCAAAGGTATCGCAACGATCAGATCGC
GACAATCCTTTTGCCGTTTAATCCGTGTTTCTTGTAGAGTACTGTACTTT
TTTGTTTGAAAATTTTACATTTTCCTCCGTTAAAGATAAATATATTATGT
TTTGATTTTTTTTAATGGTTATAATTCATTAATGTTGAAAATCAATTGAA
TTATAACATTTCTATCTATAATGGAGGGAATTGAAATTTTTGGATGAAAA
TGTGTTTTTTAGTAGAATCCTAAATGCAGATGTATAGCACAAAGCTAGCT
TGCTTGCCTATAAATTTTGTGCATGTAGTGTATCTTTGTTGTCGGAGGTT
GTATTCTGTTCCTTTGAGCTTGGAAAACCGCTGAGCCAATGAATGTAATC
ATGATATTAATGTAAATTTTTCTAGCTAAACTCAACTAAATTAAGAAAAA
ACTACTACCTTTGTTTAGT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR023210NADP_OxRdtase_dom