Cicer_arietinum_v1_Contig3453

Contig Overview


Name	Cicer_arietinum_v1_Contig3453
Unique Name	Cicer_arietinum_v1_Contig3453
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	682

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
FE669467	EST	FE669467:1..516 +
FE669861	EST	FE669861:8..508 +
HO664320	EST	HO664320:9..613 +
HO066116	EST	HO066116:339..682 -

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
FE669467	FE669467	Cicer arietinum	EST
FE669861	FE669861	Cicer arietinum	EST
HO664320	HO664320	Cicer arietinum	EST
HO066116	HO066116	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. SwissProt
Match: RK19_SPIOL (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea GN=RPL19 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.174e-31
Identity = 90/212 (42.45%), Postives = 118/212 (55.66%), Query Frame = 2

Query:   95 MASQVFLQTLFT-PN----QCIPSTK-----------LCFSSSCAASKFGSRNLPLISTSISRRCSPLIAKSTFIVRXXXXXXXXXXXXIVDEVPETDAEQVSDSDPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            MAS+V  Q L   P+    QC P  K              SS+C ++   SR    + +S         A+++F+VR             V  V E +    S+++ E    +PP+Q RVKLGD+MGIL+++A+ A+++ R  P IRTGDIVQIRLEVPENKRRLS+YKGIVIS+QN                 VEIVFP+YSPNIKEIKVV
Sbjct:    1 MASKVLPQALLVIPSNHSLQCPPLKKQLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSSNFSSIFSFPARNSFVVRSEAEDSSDAPAESVAVVAEEELPVESEAEAEE---RPPRQQRVKLGDIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRLSVYKGIVISRQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKEIKVV 209

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. SwissProt
Match: RK192_ARATH (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana GN=At5g47190 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.174e-31
Identity = 68/123 (55.28%), Postives = 88/123 (71.54%), Query Frame = 2

Query:  314 IVDEVPETDAEQVSDSDPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            +V+   ET+AE   ++    E+ KPP +TRVKLGD+MG+L+++AIE ++  R  P +RTGDIV+I+LEVPENKRRLSIYKGIV+S+QN                 VEIVFP+YSPNIKEIKVV
Sbjct:   83 VVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVV 205

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. SwissProt
Match: RK191_ARATH (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana GN=At4g17560 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.206e-30
Identity = 72/142 (50.70%), Postives = 92/142 (64.79%), Query Frame = 2

Query:  257 KSTFIVRXXXXXXXXXXXXIVDEVPETDAEQVSDSDPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            ++ FIVR             V E+ +T+         E+ + KP ++ R+KLGDVMGIL+Q+AIE ++K R  P+IRTGDIV+I+LEVPENKRRLSIYKGIV+S+QN                 VEIVFP+YSPNIKEIKVV
Sbjct:   65 RNEFIVRAEEGNTEAESEEFVAEIADTEGNV-----EEVVEAKPTRKPRIKLGDVMGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVV 201

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
Match: B7FKU8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.475e-64
Identity = 135/206 (65.53%), Postives = 150/206 (72.82%), Query Frame = 2

Query:   95 MASQVFLQTLFTPNQCIPSTKLCFSSSCAASKFGSRNLPLISTSISRRCSPLIAKSTFIVRXXXXXXXXXXXXIVDE----------VPETDAEQVSDSDPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            MASQV LQ LF+P QC PS KLCF+SSC AS FGSRNLPLISTSISRRCSPLIAK +F+VR             VDE          VPET+ EQ+ DS  E+E+ KPP+QTRVKLGDVMGILH+RAI ASD+ R TPD+RTGDIV+IRLEVPENKRRLSIYKGIVIS+QN                 VEIVFP+YSPNIKEIKVV
Sbjct:    1 MASQVLLQALFSPIQCPPS-KLCFTSSCTASTFGSRNLPLISTSISRRCSPLIAKPSFVVRADSNSDAVSASDNVDENPEASDNVDEVPETEGEQILDSASEVEESKPPRQTRVKLGDVMGILHKRAIAASDEVRTTPDLRTGDIVEIRLEVPENKRRLSIYKGIVISRQNAGIHTTIRVRRIIAGTGVEIVFPIYSPNIKEIKVV 205

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
Match: C6T030_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.348e-44
Identity = 114/204 (55.88%), Postives = 132/204 (64.71%), Query Frame = 2

Query:   95 MASQVFLQTLFTPNQCIPSTKLCFSSSCAASKFGSRNLPLIS----TSISRRCSPLIAKSTFIVRXXXXXXXXXXXXIVDEVPETDAEQVSDSDPE----IEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            MASQV LQ LF P       KL F SS       SRN+ LIS    T IS RC+PLIAK +F+VR              ++VP  +AE+VS+ + E     E  K P++ RVKLGD+MGIL+QRAIEAS+K+R TPDIRTGDIV+I+LEVPENKRRLSIYKGIVISKQN                 VEIVFPVYSPNIKEIKVV
Sbjct:    1 MASQVLLQALFAP-------KLSFPSS-------SRNVALISRVPSTPISWRCTPLIAKPSFVVRADTNLDGGGEA--TEDVPSDNAEKVSEGEAEQVSDSEAPKSPRKPRVKLGDIMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIRRIIAGTGVEIVFPVYSPNIKEIKVV 188

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
Match: C6T1E2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.247e-43
Identity = 114/205 (55.61%), Postives = 132/205 (64.39%), Query Frame = 2

Query:   95 MASQVFLQ-TLFTPNQCIPSTKLCFSSSCAASKFGSRNLPLIS----TSISRRCSPLIAKSTFIVRXXXXXXXXXXXXIVDEVPETDAEQVSDSDPE----IEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            MASQV LQ  LF P       KL F SS       SRN+ LIS    T IS RC+PLIAK +F+VR              ++VP  +AE+VS+ + E     E  K P++ RVKLGD+MGIL+QRAIEAS+K+R TPDIRTGDIV+I+LEVPENKRRLSIYKGIVISKQN                 VEIVFPVYSPNIKEIKVV
Sbjct:    1 MASQVLLQQALFAP-------KLSFPSS-------SRNVALISRVPSTPISWRCTPLIAKPSFVVRADTNLDGGGEA--TEDVPSDNAEKVSEGEAEQVSDSEAPKSPRKPRVKLGDIMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIRRIIAGTGVEIVFPVYSPNIKEIKVV 189

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
Match: C6SW18_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.407e-42
Identity = 118/207 (57.00%), Postives = 130/207 (62.80%), Query Frame = 2

Query:   95 MASQVFLQ-TLFTPNQCIPSTKLCFSSSCAASKFGSRNLPLIS----TSISRRCSPLIAKSTFIVRXXXXXXXXXXXXI------VDEVPETDAEQVSDSDPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            MASQV LQ  LF P       KL F SS       SRN+ LIS    T IS RC+PLIAK +F VR                   VDEV E + EQVSDS    E  K P++ RVKLGDVMGIL+QRAIEAS+K+R TPDIRTGDIV+I+LEVPENKRRLSIYKGIVISKQN                 VEIVFPVYSPNIKEI+VV
Sbjct:    1 MASQVLLQQALFAP-------KLSFPSS-------SRNVALISRVPSTPISWRCTPLIAKPSFAVRADSNVEGAGEATEDVPSYNVDEVSEGEGEQVSDS----EAPKSPRKPRVKLGDVMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIRRIIAGTGVEIVFPVYSPNIKEIRVV 189

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
Match: D7U6T6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_616.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00002112001 PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.194e-33
Identity = 102/209 (48.80%), Postives = 124/209 (59.33%), Query Frame = 2

Query:   95 MASQVFLQTLF-TP---NQCIPSTKLCFSSSCAASKFGSRNLPLISTS------ISRRCSPLIA--KSTFIVRXXXXXXXXXXXXIVDEVPETDAEQVSDSDPEIE-QLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            MAS+V  Q LF TP   NQ  P  K    S+  + +  S NL  +STS       +    P++   K  FIVR               E  ET +E  S+   + E + KPP++ RVKLGD+MGIL++RAIEAS+KER  PD+RTGDIV+I+LEVPEN+RRLSIYKGIVISKQN                 VEIVFPVYSPNIKEIKVV
Sbjct:    1 MASKVLPQALFITPRSSNQWPP--KKLGLSTFPSPRSSSLNLNRLSTSRFSSNSFAFHFRPIVVSPKRFFIVRAEADNEGELGADENTEEEETVSETESEVKLDAEDEAKPPRKPRVKLGDIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTTIRVRRIIAGVGVEIVFPVYSPNIKEIKVV 207

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
Match: A5B2A3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037813 PE=4 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.737e-33
Identity = 101/208 (48.56%), Postives = 122/208 (58.65%), Query Frame = 2

Query:   95 MASQVFLQTLF-TPNQC--IPSTKLCFSSSCAASKFGSRNLPLISTSISRRCS------PLIA--KSTFIVRXXXXXXXXXXXXIVDEVPETDAEQVSDSDPEIE-QLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            MAS+V  Q LF TP      P  KL  S+   + +  S NL  +STS     S      P++   K  FIV                E  ET +E  S+   + E + KPP++ RVKLGD+MGIL++RAIEAS+KER  PD+RTGDIV+I+LEVPEN+RRLSIYKGIVISKQN                 VEIVFPVYSPNIKEIKVV
Sbjct:    1 MASKVLPQALFITPRSSNQXPPKKLGLSTF-PSPRSXSLNLNRLSTSRFSSNSFXFHFRPIVVSPKRFFIVXAEADNEGELGPDENTEEEETVSETESEVKLDAEDEAKPPRKPRVKLGDIMGILNKRAIEASEKERPVPDLRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTTIRVRRIIAGVGVEIVFPVYSPNIKEIKVV 207

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
Match: Q2A9V6_BRAOL (Plastid ribosomal protein L19, putative OS=Brassica oleracea GN=24.t00054 PE=4 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.545e-31
Identity = 73/123 (59.35%), Postives = 90/123 (73.17%), Query Frame = 2

Query:  320 DEVPETDAEQVSDS--DPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            +E  E DAE V+++    E+E+ KPP + R KLGDVMGIL+Q+AIE S+K R  P+IRTGDIV+I+LEVPEN+RRLSIYKGIV+S+QN                 VEIVFP+YSPNIKEIKVV
Sbjct:   68 EESTEADAEDVAETVEAAEVEEAKPPWKPRTKLGDVMGILNQKAIEVSEKVRPVPEIRTGDIVEIKLEVPENRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVV 190

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
Match: Q2A9H1_BRAOL (Plastid ribosomal protein L19, putative OS=Brassica oleracea GN=27.t00049 PE=4 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.235e-30
Identity = 93/201 (46.27%), Postives = 117/201 (58.21%), Query Frame = 2

Query:   98 ASQVFLQTL--FTPNQCIPSTKLCFSS--SCAASKFGSRNLPLIST--SISRRCSPLIAKSTFIVRXXXXXXXXXXXXIVDEVPETDAEQVSDSDPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            +S +F Q L     N   PS KL FSS  SCA S      +  +S   S+S+    L AK+   V               +   E + E V ++     ++K PK+TRVKLGDVMGIL+Q+AIE S+K R  P+IRTGDIV+I+LEVPEN+RRLSIYKGIV+S+QN                 VEIVFP+YSPNIKEIKVV
Sbjct:    4 SSHLFPQALHMIPRNPTQPSKKLGFSSFQSCAPSMNPRLTVSRVSLNHSVSKSGFSLDAKARREVLVRAEGEGEGEAVDANADTEGNVEDVVEAG----EVKAPKKTRVKLGDVMGILNQKAIEVSEKLRPVPEIRTGDIVEIKLEVPENRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVV 200

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
Match: D7MBX1_ARALY (Ribosomal protein L19 family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_914957 PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.130e-30
Identity = 74/142 (52.11%), Postives = 91/142 (64.08%), Query Frame = 2

Query:  257 KSTFIVRXXXXXXXXXXXXIVDEVPETDAEQVSDSDPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            +  FIVR             V E+ +T+         E+ + KP ++ R+KLGDVMGIL+QRAIE S+K R  P+IRTGDIV+I+LEVPENKRRLSIYKGIV+S+QN                 VEIVFP+YSPNIKEIKVV
Sbjct:   65 RKEFIVRVEEGNTEAESEEAVAEIADTEGNV-----EEVGEAKPQRKPRIKLGDVMGILNQRAIEVSEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVV 201

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
Match: A9PBS4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_589910 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.006e-30
Identity = 89/220 (40.45%), Postives = 119/220 (54.09%), Query Frame = 2

Query:   95 MASQVFLQTLF----TPNQCIPSTKLCFSSSCAASKFGSRNLPLISTSISRRCSPLIA-----------KSTFIVRXXXXXXXXXXXXIVDEVPETDAEQVSDSDPEIE---------QLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            M S++  Q L     +P Q     KL FSS+   S + S +      S+SR  S  ++           + +F+ R            +V+E    + E V +   E E          +K P++ RVKLGD++GIL++RA+E S+ ER  PDIRTGDIV+I+LEVPEN+RRLSIYKGIVISKQN                 VEIVFP+YSPNIKEIKV+
Sbjct:    1 MGSKILPQALAVIPRSPTQFPVPKKLGFSSTINRSSYLSNSASSSRFSVSRVSSTSLSSNLEAFFKDFSRQSFVTRAESESGGGE---VVEETENVEEEVVVEGSEEEEVQAEAEVEGAVKEPRKPRVKLGDIIGILNKRAVETSEMERPIPDIRTGDIVEIKLEVPENRRRLSIYKGIVISKQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVI 217

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TAIR peptide
Match: AT5G47190.1 (| Symbols: | Ribosomal protein L19 family protein | chr5:19164432-19166064 REVERSE LENGTH=229)

HSP 1 Score: 135.191 bits (339), Expect = 3.210e-32
Identity = 68/123 (55.28%), Postives = 88/123 (71.54%), Query Frame = 2

Query:  314 IVDEVPETDAEQVSDSDPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            +V+   ET+AE   ++    E+ KPP +TRVKLGD+MG+L+++AIE ++  R  P +RTGDIV+I+LEVPENKRRLSIYKGIV+S+QN                 VEIVFP+YSPNIKEIKVV
Sbjct:   83 VVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVV 205

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TAIR peptide
Match: AT4G17560.1 (| Symbols: | Ribosomal protein L19 family protein | chr4:9780343-9781752 FORWARD LENGTH=225)

HSP 1 Score: 133.265 bits (334), Expect = 1.220e-31
Identity = 72/142 (50.70%), Postives = 92/142 (64.79%), Query Frame = 2

Query:  257 KSTFIVRXXXXXXXXXXXXIVDEVPETDAEQVSDSDPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            ++ FIVR             V E+ +T+         E+ + KP ++ R+KLGDVMGIL+Q+AIE ++K R  P+IRTGDIV+I+LEVPENKRRLSIYKGIV+S+QN                 VEIVFP+YSPNIKEIKVV
Sbjct:   65 RNEFIVRAEEGNTEAESEEFVAEIADTEGNV-----EEVVEAKPTRKPRIKLGDVMGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVV 201

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TAIR peptide
Match: AT4G11630.1 (| Symbols: | Ribosomal protein L19 family protein | chr4:7019793-7021068 FORWARD LENGTH=225)

HSP 1 Score: 78.1814 bits (191), Expect = 4.657e-15
Identity = 57/176 (32.39%), Postives = 86/176 (48.86%), Query Frame = 2

Query:  167 SSSCAA-SKFGSRNLPLISTSISRRCSPLIAK---STFIVRXXXXXXXXXXXXIVDEVPETDAEQVSDSDPEIEQLKPPKQTRVKLGDVMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            SSSC + S+  SR L   S   SR  + LI+    + F                     ++  +   +SD  + Q    K+       +M I+ + A+E     R  P+I+ G IVQ+++EVPENKRR+SI KG+VI+++N                 VE +FP+YSPN++EIKVV
Sbjct:   27 SSSCGSWSENESRKLGFDSCPSSRAATYLISSLKNAGFSSSAIPKQNFTYASRCFSTTGDSSVQGSPESDCVVPQRIKFKRLDKTAKHIMQIVDKEAVEEVRSLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVV 202

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TAIR peptide
Match: AT5G11750.1 (| Symbols: | Ribosomal protein L19 family protein | chr5:3787343-3788926 FORWARD LENGTH=229)

HSP 1 Score: 77.411 bits (189), Expect = 7.944e-15
Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 2

Query:  419 VMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            +M I+ + A+E     R  P+I+ G IVQ+++EVPENKRR+SI KG+VI+++N                 VE +FP+YSPN++EIKVV
Sbjct:  119 IMQIVDKEAVEEVRNLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVV 206

[Close]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TAIR peptide
Match: AT1G24240.1 (| Symbols: | Ribosomal protein L19 family protein | chr1:8586431-8587970 FORWARD LENGTH=222)

HSP 1 Score: 74.3294 bits (181), Expect = 6.725e-14
Identity = 38/88 (43.18%), Postives = 56/88 (63.64%), Query Frame = 2

Query:  419 VMGILHQRAIEASDKERVTPDIRTGDIVQIRLEVPENKRRLSIYKGIVISKQNXXXXXXXXXXXXXXXXXVEIVFPVYSPNIKEIKVV 682
            +M I+ + A+E     R  P+I+ G IVQ+++EVPENKRR+SI KG+VI+++N                 VE +FP+YSPN++ IKVV
Sbjct:  112 IMQIVDKEAVEEVRTLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLRVIKVV 199

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig3453 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig3453 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig3453 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3


Match Name	E-value	Identity	Description
RK19_SPIOL	3.174e-31	42.45	50S ribosomal protein L19, chloroplastic OS=Spinac...	[more]
RK192_ARATH	3.174e-31	55.28	50S ribosomal protein L19-2, chloroplastic OS=Arab...	[more]
RK191_ARATH	1.206e-30	50.70	50S ribosomal protein L19-1, chloroplastic OS=Arab...	[more]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FKU8_MEDTR	8.475e-64	65.53	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6T030_SOYBN	3.348e-44	55.88	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6T1E2_SOYBN	8.247e-43	55.61	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SW18_SOYBN	1.407e-42	57.00	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7U6T6_VITVI	1.194e-33	48.80	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5B2A3_VITVI	7.737e-33	48.56	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q2A9V6_BRAOL	5.545e-31	59.35	Plastid ribosomal protein L19, putative OS=Brassic...	[more]
Q2A9H1_BRAOL	1.235e-30	46.27	Plastid ribosomal protein L19, putative OS=Brassic...	[more]
D7MBX1_ARALY	6.130e-30	52.11	Ribosomal protein L19 family protein OS=Arabidopsi...	[more]
A9PBS4_POPTR	8.006e-30	40.45	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of Cicer_arietinum_v1_Contig3453 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G47190.1	3.210e-32	55.28	\| Symbols: \| Ribosomal protein L19 family protein...	[more]
AT4G17560.1	1.220e-31	50.70	\| Symbols: \| Ribosomal protein L19 family protein...	[more]
AT4G11630.1	4.657e-15	32.39	\| Symbols: \| Ribosomal protein L19 family protein...	[more]
AT5G11750.1	7.944e-15	44.32	\| Symbols: \| Ribosomal protein L19 family protein...	[more]
AT1G24240.1	6.725e-14	43.18	\| Symbols: \| Ribosomal protein L19 family protein...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001857	Ribosomal protein L19	PRINTS	PR00061	RIBOSOMALL19	coord: 119..148 score: 5.6e-09coord: 178..201 score: 5.6
IPR001857	Ribosomal protein L19	PANTHER	PTHR15680	RIBOSOMAL PROTEIN L19	coord: 29..201 score: 7.7
IPR001857	Ribosomal protein L19	PFAM	PF01245	Ribosomal_L19	coord: 122..201 score: 2.5
IPR008991	Translation protein SH3-like	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 117..201 score: 1.4
None	No IPR available	PANTHER	PTHR15680:SF2	50S RIBOSOMAL PROTEIN L19	coord: 29..201 score: 7.7
None	No IPR available	SEG	seg	seg	coord: 67..78 score: NAcoord: 167..183 score
None	No IPR available	SEG	seg	seg	coord: 35..48 score
None	No IPR available	SEG	seg	seg	coord: 27..54 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig3453 ID=Cicer_arietinum_v1_Contig3453; Name=Cicer_arietinum_v1_Contig3453; organism=Cicer arietinum; type=contig; length=682bp
ATTCAGTAACCGTTTTCGCTCTGTGGTGTTTCCATGACTCGTAATATCCA
CTGAACTAACCGTTTTGTCAAAACCCTAGTTTCCACCTTCCTCAATGGCT
TCCCAAGTTTTTCTCCAGACTCTGTTTACCCCTAATCAATGTATTCCATC
AACGAAGCTTTGTTTCTCTTCTTCTTGTGCCGCTTCTAAATTCGGTTCTC
GTAACTTGCCGTTGATTTCAACTTCAATTTCACGGCGTTGTAGTCCTCTC
ATTGCTAAATCTACTTTTATTGTGAGAGCTGATTCCAATGATGATGCTGG
TTCGGCTTCGGATATTGTCGATGAAGTTCCGGAAACTGATGCTGAACAGG
TTTCAGATTCTGATCCCGAAATTGAGCAATTGAAGCCACCAAAACAAACT
CGGGTTAAGCTTGGTGACGTTATGGGGATATTGCATCAGAGGGCAATTGA
GGCATCGGATAAAGAGAGGGTAACTCCAGACATTAGGACTGGAGATATTG
TGCAAATCAGATTGGAAGTTCCTGAGAACAAGCGTAGGTTGTCCATTTAT
AAAGGTATTGTAATCTCAAAACAGAATGCTGGTATTCATACCACTATTCG
AATCCGAAGAATTATTGCTGGCACAGGTGTTGAGATTGTCTTCCCAGTCT
ACTCACCAAACATCAAAGAAATCAAAGTGGTG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001857	Ribosomal_bL19
IPR008991	Translation_prot_SH3-like_sf

Search form

Cicer_arietinum_v1_Contig3453