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Contig Overview
Name | Cicer_arietinum_v1_Contig348 |
Unique Name | Cicer_arietinum_v1_Contig348 |
Type | contig |
Organism | Cicer arietinum (chickpea) |
Sequence length | 925 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
HO063860 | EST | HO063860:1..236 + |
GR398186 | EST | GR398186:97..300 - |
HO063740 | EST | HO063740:99..385 - |
HO063915 | EST | HO063915:118..315 + |
GR395815 | EST | GR395815:4..370 + |
GR408258 | EST | GR408258:99..413 + |
HO062589 | EST | HO062589:106..399 + |
HO067247 | EST | HO067247:102..389 + |
GR397679 | EST | GR397679:283..570 + |
GR395156 | EST | GR395156:100..807 + |
GR397344 | EST | GR397344:470..925 - |
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | SEG | seg | seg | coord: 1..106 score |
None | No IPR available | SEG | seg | seg | coord: 22..28 score: NAcoord: 61..83 score: NAcoord: 84..103 score |
None | No IPR available | SEG | seg | seg | coord: 1..14 score |
None | No IPR available | SEG | seg | seg | coord: 24..34 score |
None | No IPR available | SEG | seg | seg | coord: 6..27 score: NAcoord: 35..57 score |
None | No IPR available | SEG | seg | seg | coord: 3..47 score: NAcoord: 60..106 score |
None | No IPR available | SEG | seg | seg | coord: 38..56 score: NAcoord: 72..189 score |
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig348 ID=Cicer_arietinum_v1_Contig348; Name=Cicer_arietinum_v1_Contig348; organism=Cicer arietinum; type=contig; length=925bp ATTTAAAAAAATATCACTTAAGGCACTTTTCATACTTTTATATGTATCAT TCAACAATCATACAACAGTGCCATAAAAAATTAAAGCTTTGCAAAATTAC AAAGTGGAAATTGGAATCACATTAACATAACTGGTACAAATTAAAACACA GCTGATTCTTCTTCACTAAAACACACATGATGAAATCAATTCCATCATCT TACATGTTCATTATTTTGCCACACACCACATACTACTTTATTATTTATTA TTACACCAAACCAAACAGTCTAAACTTTTTTTATTATTTGAGTCAACCAT ATTATATCTATATATCTTAATCAATTCATTCATGCATTATTTCTTTAATC ACCACCACCTTCACCATAACCTCCACCATGACCATAACCCTCACCATGAC CAGAGCCCTCACCAAAGCCTTCACCACCACCACCACCACCTCCTCCTCCT CCTCCTCCACCGCCGCCACCACCGCCGCGACTTCTACCTCCTGATCCCGA TCCAGCTCGAGATCCAGCATACGAGCCTGCTTCAGAGCCTGCACCAGAAC CAGACCCTGAACTAGAAGACGAAGACGATGAACTCGAGGAAGAACTAGAA CCTGAACCAGAACCAGAACCTGCTCCAGCTCCAGCTCCAGAGCCACTACC ACCTCCAATACCCAAACCTAGTCCAGCTCCAAGTCCAATCCCCAAACCAC CAAGATCCAAACCTAAGTCCTTCCTTGCAACTCTACTTTCAGTTACAATA GCTGACATCAAAACAAGCAGTGCAAGTAAACAACATGACCAAAGTGCAGC CATTAATTCCTTGTTATTAATTATAATGTAGCAGCTTGATTGGAAGTAGC AAATTAAGTATATAGTATAGTATAGAAATATTGAAGAAACTTTAGAGGGT AGTTCAGTTGATGTTGGCTAGTCTC back to top
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