Cicer_arietinum_v1_Contig3531

Contig Overview


Name	Cicer_arietinum_v1_Contig3531
Unique Name	Cicer_arietinum_v1_Contig3531
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	697

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
FE668722	EST	FE668722:1..697 -	Cicer arietinum unigene v1	n/a
FL518979	EST	FL518979:344..675 +	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
FE668722	FE668722	Cicer arietinum	EST
FL518979	FL518979	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. SwissProt
Match: SRP72_DICDI (Signal recognition particle 72 kDa protein homolog OS=Dictyostelium discoideum GN=srp72 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.217e-18
Identity = 58/181 (32.04%), Postives = 96/181 (53.04%), Query Frame = -1

Query:    2 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETML-LESQILYRLGKMDACLHIYQKL--QKSKIDMMEI--NSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIERN 529
            LE +F  L+++I +S F  A+++ ++IL++   D +A +CKV+ L++   F +AI   +          F  +YCLY   K  EAL  L+K    +   L LE+QI Y+L      + IY+ L  +    D +E   N  A  + AG+ +E Q  L+  + + T + ELA+N+AC  I +N
Sbjct:    9 LEQLFKELDEYIINSQFKKAIRVCNKILSVNGNDSEAFQCKVICLMQLSNFTEAIECFKKPEQI-QSMQFEYSYCLYSTAKYQEALTQLEKQSSKETKSLELEAQIYYKLENYQKTISIYESLLSKPGYSDSIEFITNLCAVYLDAGKFNECQELLNKNKSQQTKTHELAFNSACLAISKN 188

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. SwissProt
Match: SRP72_HUMAN (Signal recognition particle 72 kDa protein OS=Homo sapiens GN=SRP72 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 4.645e-17
Identity = 55/175 (31.43%), Postives = 103/175 (58.86%), Query Frame = -1

Query:   11 VFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSR--TPPDDFHFLKAYCLYKQNKLDEALESLQK-HERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMM--EINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLI 520
            +++ +N++ Q+  F+ A+K  ++IL I   D  AL CKVV LI++  F +A++ I +       +   F KAYC Y+ N+++ AL++++  +++ D+   L  Q+LYRL + D CL +Y+ L ++  D    E  +  + V+A +S+  +   ++  ++   + EL YNTAC+LI
Sbjct:   14 LWSEVNRYGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVINTHTKVLANNSLSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQ-EGTHELCYNTACALI 187

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. SwissProt
Match: SRP72_CANFA (Signal recognition particle 72 kDa protein OS=Canis familiaris GN=SRP72 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.765e-16
Identity = 54/175 (30.86%), Postives = 102/175 (58.29%), Query Frame = -1

Query:   11 VFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSR--TPPDDFHFLKAYCLYKQNKLDEALESLQK-HERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMM--EINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLI 520
            +++ +N++ Q+  F+ A+K  ++IL I   D  AL CKVV LI++  F +A++ I +       +   F KAYC Y+ N+++ AL++++  +++ D+   L  Q+LYRL + D CL +Y+ L ++  D    E  +  + V+A +S+  +   ++  ++   + EL YN AC+LI
Sbjct:   14 LWSEVNRYGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVINTHTKVLANNSLSFEKAYCEYRLNRIENALKTIESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQ-EGTHELCYNAACALI 187

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. SwissProt
Match: SRP72_SCHMA (Signal recognition particle 72 kDa protein OS=Schistosoma mansoni GN=SRP72 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.827e-13
Identity = 38/111 (34.23%), Postives = 68/111 (61.26%), Query Frame = -1

Query:  200 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERND-ETMLLESQILYRLG 529
            L+  ++ LNK   + A+   + ++ +IL   PG+  A +CKVVALI+ ++++D +S ++ + T      F KAY  Y+ N+L EA ++L+  E +D +   L++Q+LYR G
Sbjct:    9 LQSAYSDLNKACSAQAYDKIINISGKILTKFPGETKAFQCKVVALIRAEKYEDCLSFLKKNPTLSSHVIFEKAYVEYRLNRLTEAAKTLESEEASDSKVQELKAQVLYRKG 119

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. SwissProt
Match: SRP72_CAEEL (Signal recognition particle 72 kDa protein homolog OS=Caenorhabditis elegans GN=F08D12.1 PE=3 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 1.355e-8
Identity = 47/178 (26.40%), Postives = 85/178 (47.75%), Query Frame = -1

Query:    8 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSRTPPDDFH---FLKAYCLYKQNKLDEALESLQKHERND-ETMLLESQILYRLGKMDACLHIYQKLQKSKIDMMEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIE 529
            L    T +++   S  +  A+   ++++   P +  A +CK+VA I+  ++ DA+  I+  +TP        F KAY  Y+Q++LDEA++ L   +++D + + L++Q+ Y+         IY  L K+  D  +    A  +      E QG +     +   S+   YN AC  IE
Sbjct:    9 LYQCLTDISRADTSGDYQKALTSANKLIRKYPKETFAFKCKLVAQIQLSQYADALELIR--KTPAHQMGHVGFEKAYIHYRQDELDEAIKELNTCDKDDVKALELKAQVFYKQENYQQAYDIYLYLLKNHSDDSDELRRANFLAVQARLEAQG-VKQAVAETEDSYSQLYNRACVEIE 183

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
Match: B9RMK3_RICCO (Signal recognition particle subunit srp72, putative OS=Ricinus communis GN=RCOM_1081350 PE=4 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.226e-65
Identity = 122/176 (69.32%), Postives = 151/176 (85.80%), Query Frame = -1

Query:    2 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMMEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIERN 529
            +ED+FTTLNKHIQ S +  AVK+ DQ+LA+APGDEDA+RCKVV +IK D  DDA+S I S++    DF F KAYCLY+QNKL+EALE+L+  ERN ET+LLESQILYRLGKMDAC+ +YQKLQKSKID +EIN VA+L++AGR+SEVQG +++ R+KA+SSFELAYNTACSLI+RN
Sbjct:   22 IEDLFTTLNKHIQRSDYEQAVKVADQVLAVAPGDEDAIRCKVVGMIKADNIDDALSTIHSAQRLTVDFSFFKAYCLYRQNKLEEALETLRGQERNSETLLLESQILYRLGKMDACVDVYQKLQKSKIDSLEINFVASLILAGRASEVQGMMEANRIKASSSFELAYNTACSLIQRN 197

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
Match: D7TAL8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_10.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010320001 PE=4 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 3.020e-64
Identity = 125/176 (71.02%), Postives = 146/176 (82.95%), Query Frame = -1

Query:    2 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMMEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIERN 529
            +ED+FT+LN HIQ S F  AVK+ DQIL +AP DEDA+RCKVVALIK+DR +DA+S IQ+S+  P D  F KAYCLY+QNKLDE+LESL+  E +   MLLESQILYRLGKMDAC+ IYQKLQKSKI+ +EIN VA LV AGR S+VQG LD+ RVKATSSFELAYNTACSLIER+
Sbjct:   21 IEDLFTSLNLHIQRSQFDQAVKVADQILLVAPSDEDAIRCKVVALIKEDRINDALSTIQASQRLPIDLSFFKAYCLYRQNKLDESLESLKSQEGSSTAMLLESQILYRLGKMDACIDIYQKLQKSKIESLEINLVAGLVSAGRGSDVQGTLDALRVKATSSFELAYNTACSLIERS 196

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
Match: A5BSZ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028102 PE=4 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 3.020e-64
Identity = 125/176 (71.02%), Postives = 146/176 (82.95%), Query Frame = -1

Query:    2 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMMEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIERN 529
            +ED+FT+LN HIQ S F  AVK+ DQIL +AP DEDA+RCKVVALIK+DR +DA+S IQ+S+  P D  F KAYCLY+QNKLDE+LESL+  E +   MLLESQILYRLGKMDAC+ IYQKLQKSKI+ +EIN VA LV AGR S+VQG LD+ RVKATSSFELAYNTACSLIER+
Sbjct:  443 IEDLFTSLNLHIQRSQFDQAVKVADQILLVAPSDEDAIRCKVVALIKEDRINDALSTIQASQRLPIDLSFFKAYCLYRQNKLDESLESLKSQEGSSTAMLLESQILYRLGKMDACIDIYQKLQKSKIESLEINLVAGLVSAGRGSDVQGTLDALRVKATSSFELAYNTACSLIERS 618

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
Match: B9HCM4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_561538 PE=4 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.826e-62
Identity = 120/178 (67.42%), Postives = 148/178 (83.15%), Query Frame = -1

Query:    2 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSRTP--PDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMMEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIERN 529
            +ED+F+ LN+HI+ S F  AVK+ DQ+L++AP DEDA+RCKVVALIK D  D A+S I S+R    P DF + KAYCLY+QNKLDEALESL+  ER  ETMLLESQIL+RLGKMDAC+ +YQKLQKSKID +EIN VA L++AG+SS+VQG +++ R+KA+SSFELAYNTACSLIERN
Sbjct:   19 IEDLFSNLNRHIERSEFEQAVKVADQVLSVAPNDEDAIRCKVVALIKCDSIDKALSTIHSARRQNLPFDFSYFKAYCLYRQNKLDEALESLKGLERTSETMLLESQILFRLGKMDACVDVYQKLQKSKIDTLEINLVAGLILAGKSSQVQGMMEANRIKASSSFELAYNTACSLIERN 196

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
Match: Q9FXD4_ARATH (F12A21.17 OS=Arabidopsis thaliana GN=At1g67680 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.406e-53
Identity = 107/186 (57.53%), Postives = 142/186 (76.34%), Query Frame = -1

Query:    2 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDD----------AISAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMMEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIERN 529
            +ED+FT+L++HI+ + +  AVK+ DQ+L+I P DEDA+RCKVVALIKDD+FDD          A+S I S +  P D  F KAYCLY+ NKLDEAL  L+  ER+ +T++LE+QILYRLGK DAC+ +YQKL KS+I+ +E+N VA L+ AG++S+VQ  L+S ++K TSSFELAYNTACSLIE N
Sbjct:   20 IEDLFTSLHQHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVVALIKDDKFDDYLIKDVKINGALSVINSFQKLPIDLGFHKAYCLYRVNKLDEALVCLKGLERDTDTLVLEAQILYRLGKADACVDVYQKLTKSQIETLEVNLVAGLISAGKASQVQKTLESLKIKPTSSFELAYNTACSLIENN 205

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
Match: D7KVM9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475871 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.554e-52
Identity = 104/176 (59.09%), Postives = 136/176 (77.27%), Query Frame = -1

Query:    2 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMMEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIERN 529
            +ED+F++LN HIQ S F  AVK+ D++L+I P DEDA+RCKVVALIKDD+ D A+S I S +  P D  F  AYCLY+ NKLDEAL  L+  ER+ +T+LLESQILYRLGK DAC+ + QKL KS+I+ +EIN VAAL+ AG++S+V   L+  ++K TS+++LAYNTACSLIE N
Sbjct:   20 IEDLFSSLNGHIQGSEFEEAVKVADKVLSILPTDEDAIRCKVVALIKDDKIDGALSVISSFQKLPIDLGFQNAYCLYRLNKLDEALVCLKGLERDSDTLLLESQILYRLGKADACVDVCQKLSKSEIESLEINLVAALITAGKASQVPKALEGLKIKPTSTYDLAYNTACSLIENN 195

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
Match: Q9FXD1_ARATH (F12A21.20 OS=Arabidopsis thaliana GN=At1g67650 PE=4 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.826e-48
Identity = 98/183 (53.55%), Postives = 138/183 (75.41%), Query Frame = -1

Query:    2 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAI-------SAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMMEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIERN 529
            +ED+FT+L+KHI+ + +  AVK+ DQ+L+I P DEDA+RCKVVALIKDD+FDD +        A+    + P D  F KAYCLY++NKLDEAL  L+  ER  +T+LLE+QIL  LGK+DAC+ +YQKL KS I ++E+N VAAL+ AG++S+V   L+S +++ T++++LAYNTACSLIE +
Sbjct:   16 IEDLFTSLHKHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVVALIKDDKFDDYLIKDVKINGALSVINSFPIDLGFHKAYCLYRENKLDEALVCLKGLERESKTLLLEAQILNCLGKVDACVDVYQKLNKSGIKLIEVNLVAALIRAGKASQV---LESLKIRPTTTYQLAYNTACSLIENS 195

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
Match: C5XEQ3_SORBI (Putative uncharacterized protein Sb03g042250 OS=Sorghum bicolor GN=Sb03g042250 PE=4 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.325e-46
Identity = 98/183 (53.55%), Postives = 129/183 (70.49%), Query Frame = -1

Query:    8 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMME--INSVAALVMAGRSSEVQGWLDSFRV-------KATSSFELAYNTACSLIE 529
            +ED+FT++++HI++ AF  A K+ DQ+L  APGDEDA+RCKVVA IK D  D A +AI+++   P D  + KAYC Y+QNKL EALE L+  E     + LESQI YRLG+M+ C+  Y+KLQK KID M+  IN +AALV AGR+SEVQ  + + +V       + T SFELAYN+ACSLIE
Sbjct:   17 VEDLFTSIHRHIEAGAFEQAAKVADQVLKAAPGDEDAVRCKVVAYIKADEIDKAFAAIRAAERLPIDLSYYKAYCCYRQNKLQEALELLRGQEETSAVLQLESQIFYRLGRMNDCMSSYEKLQKFKIDSMDLKINIIAALVAAGRASEVQAAMKAHKVDLTTRALRDTRSFELAYNSACSLIE 199

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
Match: Q5N842_ORYSJ (Os01g0889000 protein OS=Oryza sativa subsp. japonica GN=B1099D03.37 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.409e-45
Identity = 98/183 (53.55%), Postives = 131/183 (71.58%), Query Frame = -1

Query:    8 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMME--INSVAALVMAGRSSEVQGW-------LDSFRVKATSSFELAYNTACSLIE 529
            +ED+FTTL++HI++  F  AVK+ DQ+LA APGDEDA+RCKVVA IK D  + A++AI+++   P D  + KAYC Y+QNKL EAL+ L+  E     + LESQI YRLG+M+ C++ Y+KLQK K++ M+  IN +AALV AGR+SEVQ         L S  ++ T SFELAYN+ACSLIE
Sbjct:   22 VEDLFTTLHRHIEAGEFPQAVKVADQVLAAAPGDEDAVRCKVVAHIKSDAIEKALAAIRAAERLPIDLSYCKAYCYYRQNKLQEALDLLKGQEETSAILQLESQIYYRLGRMNDCMNSYEKLQKFKVESMDLKINIIAALVAAGRASEVQATMKAQKVDLSSRALRDTRSFELAYNSACSLIE 204

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
Match: A3A0D4_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_04352 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.409e-45
Identity = 98/183 (53.55%), Postives = 131/183 (71.58%), Query Frame = -1

Query:    8 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAISAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMME--INSVAALVMAGRSSEVQGW-------LDSFRVKATSSFELAYNTACSLIE 529
            +ED+FTTL++HI++  F  AVK+ DQ+LA APGDEDA+RCKVVA IK D  + A++AI+++   P D  + KAYC Y+QNKL EAL+ L+  E     + LESQI YRLG+M+ C++ Y+KLQK K++ M+  IN +AALV AGR+SEVQ         L S  ++ T SFELAYN+ACSLIE
Sbjct:   22 VEDLFTTLHRHIEAGEFPQAVKVADQVLAAAPGDEDAVRCKVVAHIKSDAIEKALAAIRAAERLPIDLSYCKAYCYYRQNKLQEALDLLKGQEETSAILQLESQIYYRLGRMNDCMNSYEKLQKFKVESMDLKINIIAALVAAGRASEVQATMKAQKVDLSSRALRDTRSFELAYNSACSLIE 204

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TAIR peptide
Match: AT1G67680.1 (| Symbols: | SRP72 RNA-binding domain | chr1:25365962-25368464 REVERSE LENGTH=664)

HSP 1 Score: 213.386 bits (542), Expect = 9.633e-56
Identity = 107/186 (57.53%), Postives = 142/186 (76.34%), Query Frame = -1

Query:    2 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDD----------AISAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMMEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIERN 529
            +ED+FT+L++HI+ + +  AVK+ DQ+L+I P DEDA+RCKVVALIKDD+FDD          A+S I S +  P D  F KAYCLY+ NKLDEAL  L+  ER+ +T++LE+QILYRLGK DAC+ +YQKL KS+I+ +E+N VA L+ AG++S+VQ  L+S ++K TSSFELAYNTACSLIE N
Sbjct:   20 IEDLFTSLHQHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVVALIKDDKFDDYLIKDVKINGALSVINSFQKLPIDLGFHKAYCLYRVNKLDEALVCLKGLERDTDTLVLEAQILYRLGKADACVDVYQKLTKSQIETLEVNLVAGLISAGKASQVQKTLESLKIKPTSSFELAYNTACSLIENN 205

[Close]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TAIR peptide
Match: AT1G67650.1 (| Symbols: | SRP72 RNA-binding domain | chr1:25359832-25362395 REVERSE LENGTH=651)

HSP 1 Score: 194.126 bits (492), Expect = 6.048e-50
Identity = 98/183 (53.55%), Postives = 138/183 (75.41%), Query Frame = -1

Query:    2 LEDVFTTLNKHIQSSAFSNAVKLTDQILAIAPGDEDALRCKVVALIKDDRFDDAI-------SAIQSSRTPPDDFHFLKAYCLYKQNKLDEALESLQKHERNDETMLLESQILYRLGKMDACLHIYQKLQKSKIDMMEINSVAALVMAGRSSEVQGWLDSFRVKATSSFELAYNTACSLIERN 529
            +ED+FT+L+KHI+ + +  AVK+ DQ+L+I P DEDA+RCKVVALIKDD+FDD +        A+    + P D  F KAYCLY++NKLDEAL  L+  ER  +T+LLE+QIL  LGK+DAC+ +YQKL KS I ++E+N VAAL+ AG++S+V   L+S +++ T++++LAYNTACSLIE +
Sbjct:   16 IEDLFTSLHKHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVVALIKDDKFDDYLIKDVKINGALSVINSFPIDLGFHKAYCLYRENKLDEALVCLKGLERESKTLLLEAQILNCLGKVDACVDVYQKLNKSGIKLIEVNLVAALIRAGKASQV---LESLKIRPTTTYQLAYNTACSLIENS 195

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig3531 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig3531 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig3531 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 5


Match Name	E-value	Identity	Description
SRP72_DICDI	3.217e-18	32.04	Signal recognition particle 72 kDa protein homolog...	[more]
SRP72_HUMAN	4.645e-17	31.43	Signal recognition particle 72 kDa protein OS=Homo...	[more]
SRP72_CANFA	1.765e-16	30.86	Signal recognition particle 72 kDa protein OS=Cani...	[more]
SRP72_SCHMA	1.827e-13	34.23	Signal recognition particle 72 kDa protein OS=Schi...	[more]
SRP72_CAEEL	1.355e-8	26.40	Signal recognition particle 72 kDa protein homolog...	[more]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9RMK3_RICCO	1.226e-65	69.32	Signal recognition particle subunit srp72, putativ...	[more]
D7TAL8_VITVI	3.020e-64	71.02	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BSZ0_VITVI	3.020e-64	71.02	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9HCM4_POPTR	2.826e-62	67.42	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9FXD4_ARATH	1.406e-53	57.53	F12A21.17 OS=Arabidopsis thaliana GN=At1g67680 PE=...	[more]
D7KVM9_ARALY	1.554e-52	59.09	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9FXD1_ARATH	8.826e-48	53.55	F12A21.20 OS=Arabidopsis thaliana GN=At1g67650 PE=...	[more]
C5XEQ3_SORBI	6.325e-46	53.55	Putative uncharacterized protein Sb03g042250 OS=So...	[more]
Q5N842_ORYSJ	1.409e-45	53.55	Os01g0889000 protein OS=Oryza sativa subsp. japoni...	[more]
A3A0D4_ORYSJ	1.409e-45	53.55	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of Cicer_arietinum_v1_Contig3531 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G67680.1	9.633e-56	57.53	\| Symbols: \| SRP72 RNA-binding domain \| chr1:2536...	[more]
AT1G67650.1	6.048e-50	53.55	\| Symbols: \| SRP72 RNA-binding domain \| chr1:2535...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 19..40 score
None	No IPR available	SEG	seg	seg	coord: 22..40 score
None	No IPR available	PANTHER	PTHR14094	SIGNAL RECOGNITION PARTICLE 72	coord: 10..195 score: 2.4
None	No IPR available	PANTHER	PTHR14094:SF9	SIGNAL RECOGNITION PARTICLE 72	coord: 10..195 score: 2.4
None	No IPR available	SEG	seg	seg	coord: 5..19 score
None	No IPR available	SUPERFAMILY	48452	TPR-like	coord: 17..145 score: 2
None	No IPR available	SEG	seg	seg	coord: 89..99 score
IPR011990	Tetratricopeptide-like helical	GENE3D	1.25.40.10	no description	coord: 13..144 score: 2.3

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig3531 ID=Cicer_arietinum_v1_Contig3531; Name=Cicer_arietinum_v1_Contig3531; organism=Cicer arietinum; type=contig; length=697bp
TATTCCTTTCAATTAAAGAACAAGCAGTATTGTATGCCAATTCAAAGCTG
CTTGTTGCTTTAACCCGAAATGAATCCAACCATCCTTGAACTTCAGATGA
TCTCCCTGCCATAACTAAGGCAGCAACAGAATTTATTTCCATCATATCAA
TCTTGGACTTCTGAAGCTTCTGGTAGATATGTAAGCAAGCATCCATTTTT
CCAAGACGATACAAAATTTGAGATTCCAAAAGCATAGTTTCATCATTTCT
CTCATGTTTTTGCAAAGACTCCAAAGCTTCATCCAACTTGTTTTGTTTGT
ATAAGCAATATGCCTTAAGGAAATGAAAATCATCGGGAGGAGTACGAGAA
GATTGAATGGCGGAGATTGCATCGTCGAATCGATCATCTTTGATTAACGC
GACGACCTTGCATCTGAGTGCGTCTTCGTCGCCAGGGGCAATTGCGAGAA
TCTGATCTGTGAGTTTGACGGCATTGGAGAAAGCGGAGGATTGGATGTGC
TTGTTGAGAGTGGTGAACACATCTTCGAGTGGAGGTGGAGTAGGAGGCTG
GGACGGCGTTGGTTTGGGCTTCGGAGCCATTAGGCTTCAGCCGAAGCAAG
CTGCGTTTGATTCTCCCATCTACTCCGCGACTGTATCGGTCACGTTCATC
CGGCAGAATTGTATCGCCGTCGTTGGAATTCGAATTCCTGCAGCCCG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf

Search form

Cicer_arietinum_v1_Contig3531