Cicer_arietinum_v1_Contig3542

Contig Overview


Name	Cicer_arietinum_v1_Contig3542
Unique Name	Cicer_arietinum_v1_Contig3542
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	803

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
FE669117	EST	FE669117:1..657 +
FE669388	EST	FE669388:174..724 +
FD449549	EST	FD449549:408..803 -

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
FE669117	FE669117	Cicer arietinum	EST
FE669388	FE669388	Cicer arietinum	EST
FD449549	FD449549	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.328e-85
Identity = 150/179 (83.80%), Postives = 170/179 (94.97%), Query Frame = -1

Query:  273 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFY-GQAAQQV-HVPVPEGCTDPNATNFDPTARSDDGTCVY 803
            RDGRMEKFYWAPTR+DR+GVCKGIF+ DN++++ IVK+VDTFPGQS+DFFGALRARVY DEVRKW+S +GV+TIGKKLVNSKEGPP+FEQPKMT++KLL YG MLVQEQENVKRVQLADKYMSEAALG+AN+DAIKRGTFY GQAAQQV +VPVPEGCTDP ATN+DPTARSDDG+CVY
Sbjct:  296 RDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.770e-83
Identity = 141/178 (79.21%), Postives = 164/178 (92.13%), Query Frame = -1

Query:  270 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVYT 803
            RDGRMEKFYWAPTRDDR+GVCKGIF+ DN+S+E++VKIVDTFPGQS+DFFGALRARVYDDEVRKW+   G+E IGK+LVNS++GP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLAD YMS+AALG+AN DA+K G+FYG+ AQQ  +PVPEGCTD NA N+DPTARSDDG+C+YT
Sbjct:  286 RDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2)

HSP 1 Score: 305.449 bits (781), Expect = 2.345e-82
Identity = 143/179 (79.89%), Postives = 164/179 (91.62%), Query Frame = -1

Query:  270 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQV-HVPVPEGCTDPNATNFDPTARSDDGTCVYT 803
            RDGRMEKFYWAPTRDDRVGVCKGIF+ DN+ +E IVKIVD+FPGQS+DFFGALRARVYDDEVRKW+S  GVE IGK+LVNS+EGPP FEQPKMT+EKL+EYG MLV+EQENVKRVQLA++Y+SEAALG+AN DA+K G+FYGQ AQQ  ++PVPEGCTDP A NFDPTARSDDG+C+YT
Sbjct:  287 RDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYGQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2)

HSP 1 Score: 298.901 bits (764), Expect = 2.195e-80
Identity = 139/177 (78.53%), Postives = 159/177 (89.83%), Query Frame = -1

Query:  273 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVY 803
            RDGRMEKFYWAPTR+DR+GVCKGIF+ D I +E IV +VD FPGQS+DFFGALRARVYDDEVRK++  +GVE IGK+LVNS+EGPP FEQP+MT EKL+EYGNMLV EQENVKRVQLA+ Y+S+AALG+AN DAI RGTFYG+ AQQV++PVPEGCTDP A NFDPTARSDDGTCVY
Sbjct:  296 RDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 2.866e-80
Identity = 135/179 (75.42%), Postives = 159/179 (88.83%), Query Frame = -1

Query:  267 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVYTL 803
            RDGRMEKFYWAPTR+DR+GVC GIFK D +  E +VK+VD FPGQS+DFFGALRARVY DEVRKW++ +GV+ +GKKLVNSK+GPP FEQP+MT++KL+EYGNMLVQEQENVKRVQLAD+YMS AALG+AN DAI RGTF+G+AAQQV +PV +GCTDP A N+DPTARSDDG+C Y L
Sbjct:  294 RDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.130e-68
Identity = 120/142 (84.51%), Postives = 136/142 (95.77%), Query Frame = -1

Query:  378 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYG 803
            RDGRMEKFYWAPTR+DR+GVC GIF+ DN+++E IVK+VDTFPGQS+DFFGALRARVYDDEVRKWI+G+GV++IGKKLVNSKEGPPTFEQPKMT+EKLLEYGNMLVQEQENVKRVQLADKY+SEAALG+AN DA+  GTFYG
Sbjct:  296 RDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.517e-68
Identity = 120/140 (85.71%), Postives = 134/140 (95.71%), Query Frame = -1

Query:  384 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTF 803
            RDGRMEKFYWAPTR+DR+GVCKGIF+ DN+ EE IVK+VD FPGQS+DFFGALRARVYDDEVRKW+S +GV+TIGKKLVNSKEGPPTFEQPKMT++KLL+YGNMLV+EQENVKRVQLADKYMSEAALG+AN DAIKRGTF
Sbjct:  296 RDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.746e-67
Identity = 115/143 (80.42%), Postives = 135/143 (94.41%), Query Frame = -1

Query:  375 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQ 803
            RDGRMEKFYWAPTR+DR+GVCKGIF+ DN+ +EA+V++VDTFPGQS+DFFGALRARVYDDEVRKW+  IGVE I K+LVNS+EGPPTF+QPKMT+EKL+EYG+MLVQEQENVKRVQLADKY+SEAALG+ANDDA+K G FYG+
Sbjct:  283 RDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 5.248e-66
Identity = 116/141 (82.27%), Postives = 132/141 (93.62%), Query Frame = -1

Query:  381 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFY 803
            RDGRMEKFYWAPTRDDRVGVCKGIF+ D + EE I K+VDTFPGQS+DFFGALRARVYDDEVRKWISG+GV+  GKKLVNSKEGPPTF+QPKM+++KLL+YGNMLVQEQENVKRVQLADKY++EAALG AN+DAIK G+F+
Sbjct:  298 RDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.688e-64
Identity = 114/140 (81.43%), Postives = 128/140 (91.43%), Query Frame = -1

Query:  384 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTF 803
            RDGRMEKFYWAPTR+DR+GVCKGIF+ DN+ EEA++KIVDTFPGQS+DFFGALRARVYDDEVRKW+SG G+E IG KL+NS +GPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLA+ Y+ EAALG+AN DAI  G F
Sbjct:  300 RDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
Match: D4N5G2_SOYBN (Rubisco activase OS=Glycine max GN=RCA14 PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 5.520e-90
Identity = 155/178 (87.08%), Postives = 171/178 (96.07%), Query Frame = -1

Query:  270 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVYT 803
            RDGRMEKFYWAPTRDDRVGVCKGIF+ DN+ E+ IVK+VDTFPGQS+DFFGALRARVYDDEVRKWISG+GV+ IGKKLVNSKEGPPTF+QPKMT+ KLLEYGNMLVQEQENVKRVQLADKY++EAALG+AN DAIKRGTFYG+AAQQV +PVPEGCTDPNA+NFDPTARSDDGTC+YT
Sbjct:  300 RDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPEDEIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDLIGKKLVNSKEGPPTFDQPKMTLSKLLEYGNMLVQEQENVKRVQLADKYLNEAALGDANQDAIKRGTFYGKAAQQVKIPVPEGCTDPNASNFDPTARSDDGTCLYT 477

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
Match: Q06B48_ACERU (Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase large protein isoform OS=Acer rubrum PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 6.748e-88
Identity = 150/179 (83.80%), Postives = 171/179 (95.53%), Query Frame = -1

Query:  267 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVYTL 803
            RDGRMEKFYWAPTR+DR+GVCKGIF+ DN+++  ++K+VDTFPGQS+DFFGALRARVYDDEVRKWISGIGV++IGK LVNSK GPPTFEQPKMT++KLLEYGNMLVQEQENVKRVQLADKY+SEAALG+ANDDAIKRG+FYG+AAQQV+VPVPEGCTD NA N+DPTARSDDG+C YTL
Sbjct:  296 RDGRMEKFYWAPTREDRIGVCKGIFRSDNVADNELIKLVDTFPGQSIDFFGALRARVYDDEVRKWISGIGVDSIGKNLVNSKNGPPTFEQPKMTIDKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANDDAIKRGSFYGKAAQQVNVPVPEGCTDRNAANYDPTARSDDGSCQYTL 474

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
Match: Q06B50_ACERU (Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase large protein isoform OS=Acer rubrum PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 1.151e-87
Identity = 150/179 (83.80%), Postives = 171/179 (95.53%), Query Frame = -1

Query:  267 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVYTL 803
            RDGRMEKFYWAPTR+DR+GVCKGIF+ DN+++  ++K+VDTFPGQS+DFFGALRARVYDDEVRKWISGIGV++IGK LVNSK GPPTFEQPKMT++KLLEYGNMLVQEQENVKRVQLADKY+SEAALG+ANDDAIKRG+FYG+AAQQV+VPVPEGCTD NA N+DPTARSDDG+C YTL
Sbjct:  296 RDGRMEKFYWAPTREDRIGVCKGIFRSDNVADGELIKLVDTFPGQSIDFFGALRARVYDDEVRKWISGIGVDSIGKNLVNSKNGPPTFEQPKMTIDKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANDDAIKRGSFYGKAAQQVNVPVPEGCTDRNAANYDPTARSDDGSCQYTL 474

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
Match: A9PFQ2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 2.564e-87
Identity = 151/177 (85.31%), Postives = 167/177 (94.35%), Query Frame = -1

Query:  273 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVY 803
            RDGRMEKFYWAPTR+DR+GVC GIFK DN+ E+ IVK+VDTFPGQS+DFFGALRARVYDDEVRKW+SG+GVE+IGKKLVNS+EGPPTFEQP MTVEKL EYGNMLV+EQENVKRVQLADKY+S+AALGEAN DAI+RGTFYGQAAQQV VP+PEGCTDPNA NFDPTARSDDG+C Y
Sbjct:  299 RDGRMEKFYWAPTREDRIGVCIGIFKTDNVPEDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVESIGKKLVNSREGPPTFEQPPMTVEKLFEYGNMLVKEQENVKRVQLADKYLSDAALGEANQDAIERGTFYGQAAQQVKVPIPEGCTDPNAANFDPTARSDDGSCSY 475

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
Match: A8QIH7_MORAL (Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase (Fragment) OS=Morus alba var. multicaulis PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 2.564e-87
Identity = 151/177 (85.31%), Postives = 169/177 (95.48%), Query Frame = -1

Query:  273 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVY 803
            RDGRMEKFYWAPTR+DR+GVC GIF+ D++ EE IVKIVDTFPGQS+DFFGALRARVYDDEVRKWISG+GVETIGKKLVNSKEGPPTF+QPKMTVEKLLEYGNMLVQEQENVKRVQLADKY+SEAALG+AN D+IK GTFYG+AAQQ+++PVPEGCTDP A NFDPTARSD+G+C+Y
Sbjct:   70 RDGRMEKFYWAPTREDRIGVCTGIFRSDHVPEEDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVETIGKKLVNSKEGPPTFDQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANQDSIKSGTFYGKAAQQINIPVPEGCTDPLAANFDPTARSDNGSCLY 246

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
Match: Q19RP2_9MAGN (Ribulose-1,5-bisphosphate carboxylase/oxygenase activase (Fragment) OS=Pachysandra terminalis PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 3.349e-87
Identity = 152/179 (84.92%), Postives = 167/179 (93.30%), Query Frame = -1

Query:  267 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVYTL 803
            RDGRMEKFYWAPTRDDR+GVC GIFK DN+  E +VKIVDTFPGQS+DFFGALRARVYDDEVRKWISG+GV+ +GKKLVNS+EGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKY+SEAALG+AN DAI  GTFYG+AAQQV +PVPEGCTDP+A NFDPTARSDDG+C+Y L
Sbjct:  136 RDGRMEKFYWAPTRDDRIGVCTGIFKADNVPPEDVVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDKVGKKLVNSREGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANKDAINSGTFYGKAAQQVKLPVPEGCTDPSAQNFDPTARSDDGSCLYQL 314

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
Match: B9HT80_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_227384 PE=4 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 3.349e-87
Identity = 152/177 (85.88%), Postives = 166/177 (93.79%), Query Frame = -1

Query:  273 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVY 803
            RDGRMEKFYWAPTRDDR+GVC GIFK D I +E IVK+VDTFPGQS+DFFGALRARVYDDEVRKW+SG+GV++IGKKLVNS+EGPPTFEQPKMT+EKLLEYGNMLVQEQENVKRVQLADKY+SEA+LGEAN D+I RGTFYGQAAQQV VPV EGCTDPNA NFDPTARSDDG+C Y
Sbjct:  248 RDGRMEKFYWAPTRDDRIGVCIGIFKSDKIPKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVDSIGKKLVNSREGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEASLGEANQDSIDRGTFYGQAAQQVKVPVAEGCTDPNAANFDPTARSDDGSCTY 424

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
Match: A9PJ06_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 3.349e-87
Identity = 152/177 (85.88%), Postives = 167/177 (94.35%), Query Frame = -1

Query:  273 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVY 803
            RDGRMEKFYWAPTRDDR+GVC GIFK D I++E IVK+VDTFPGQS+DFFGALRARVYDDEVRKWISG+GV++IGKKLVNS++GPPTFEQPKMT+EKLLEYGNMLVQEQENVKRVQLADKY+SEA+LGEAN D+I RGTFYGQAAQQV VPV EGCTDPNA NFDPTARSDDG+C Y
Sbjct:  298 RDGRMEKFYWAPTRDDRIGVCIGIFKSDKIAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDSIGKKLVNSRDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEASLGEANQDSIDRGTFYGQAAQQVKVPVAEGCTDPNAANFDPTARSDDGSCTY 474

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
Match: A9PGU7_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 3.349e-87
Identity = 152/177 (85.88%), Postives = 166/177 (93.79%), Query Frame = -1

Query:  273 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVY 803
            RDGRMEKFYWAPTRDDR+GVC GIFK D I +E IVK+VDTFPGQS+DFFGALRARVYDDEVRKW+SG+GV++IGKKLVNS+EGPPTFEQPKMT+EKLLEYGNMLVQEQENVKRVQLADKY+SEA+LGEAN D+I RGTFYGQAAQQV VPV EGCTDPNA NFDPTARSDDG+C Y
Sbjct:  298 RDGRMEKFYWAPTRDDRIGVCIGIFKSDKIPKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWVSGVGVDSIGKKLVNSREGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEASLGEANQDSIDRGTFYGQAAQQVKVPVAEGCTDPNAANFDPTARSDDGSCTY 474

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
Match: Q9AXG0_GOSHI (Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 4.374e-87
Identity = 151/177 (85.31%), Postives = 166/177 (93.79%), Query Frame = -1

Query:  273 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVY 803
            RDGRMEKFYWAPTRDDR+GVCKGIF+ D + +E IVK+VDTFPGQS+DFFGALRARVYDDEVRKWIS +GV ++GKKLVNS+EGPPTFEQPKMT+EKLLEYGNMLV EQENVKRVQLADKY+SEAALGEAN+D+I RGTFYG+AAQQV VPVPEGCTDPNA NFDPTARSDDGTC Y
Sbjct:  257 RDGRMEKFYWAPTRDDRIGVCKGIFRTDGVRDEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISEVGVASVGKKLVNSREGPPTFEQPKMTIEKLLEYGNMLVAEQENVKRVQLADKYLSEAALGEANEDSINRGTFYGKAAQQVGVPVPEGCTDPNADNFDPTARSDDGTCTY 433

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TAIR peptide
Match: AT2G39730.1 (| Symbols: RCA | rubisco activase | chr2:16570951-16573345 REVERSE LENGTH=474)

HSP 1 Score: 298.901 bits (764), Expect = 2.156e-81
Identity = 139/177 (78.53%), Postives = 159/177 (89.83%), Query Frame = -1

Query:  273 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQVHVPVPEGCTDPNATNFDPTARSDDGTCVY 803
            RDGRMEKFYWAPTR+DR+GVCKGIF+ D I +E IV +VD FPGQS+DFFGALRARVYDDEVRK++  +GVE IGK+LVNS+EGPP FEQP+MT EKL+EYGNMLV EQENVKRVQLA+ Y+S+AALG+AN DAI RGTFYG+ AQQV++PVPEGCTDP A NFDPTARSDDGTCVY
Sbjct:  296 RDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TAIR peptide
Match: AT2G39730.2 (| Symbols: RCA | rubisco activase | chr2:16571046-16573345 REVERSE LENGTH=446)

HSP 1 Score: 237.269 bits (604), Expect = 7.703e-63
Identity = 110/147 (74.83%), Postives = 130/147 (88.44%), Query Frame = -1

Query:  363 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQAAQQ 803
            RDGRMEKFYWAPTR+DR+GVCKGIF+ D I +E IV +VD FPGQS+DFFGALRARVYDDEVRK++  +GVE IGK+LVNS+EGPP FEQP+MT EKL+EYGNMLV EQENVKRVQLA+ Y+S+AALG+AN DAI RGTFYG+  ++
Sbjct:  296 RDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKTEEK 442

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TAIR peptide
Match: AT2G39730.3 (| Symbols: RCA | rubisco activase | chr2:16571174-16573345 REVERSE LENGTH=441)

HSP 1 Score: 236.498 bits (602), Expect = 1.314e-62
Identity = 110/143 (76.92%), Postives = 128/143 (89.51%), Query Frame = -1

Query:  375 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGIGVETIGKKLVNSKEGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYMSEAALGEANDDAIKRGTFYGQ 803
            RDGRMEKFYWAPTR+DR+GVCKGIF+ D I +E IV +VD FPGQS+DFFGALRARVYDDEVRK++  +GVE IGK+LVNS+EGPP FEQP+MT EKL+EYGNMLV EQENVKRVQLA+ Y+S+AALG+AN DAI RGTFYG+
Sbjct:  296 RDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGK 438

[Close]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TAIR peptide
Match: AT1G73110.1 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27494344-27496844 REVERSE LENGTH=432)

HSP 1 Score: 118.627 bits (296), Expect = 3.993e-27
Identity = 57/125 (45.60%), Postives = 83/125 (66.40%), Query Frame = -1

Query:  438 RDGRMEKFYWAPTRDDRVGVCKGIFKHDNISEEAIVKIVDTFPGQSVDFFGALRARVYDDEVRKWISGI-GVETIGKKLVNSK--EGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYM 803
            R+GRMEKFYW PTR+D V +   +++ D IS + ++ IVD FP Q++DF+GALR+R YD  + KW+    G+ET+GK L+  K  +  P F  P+ TVE LLE G  L+ EQ+ +   +L+ +YM
Sbjct:  303 REGRMEKFYWQPTREDIVNIVSRMYEKDGISRKDVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAGGMETLGKVLLRRKKTQEVPQFTAPEQTVEALLESGYSLINEQKLIMETKLSKEYM 427

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig3542 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig3542 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RCA1_LARTR	1.328e-85	83.80	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCAA_HORVU	2.770e-83	79.21	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_ORYSJ	2.345e-82	79.89	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_ARATH	2.195e-80	78.53	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_SPIOL	2.866e-80	75.42	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_MALDO	1.130e-68	84.51	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA2_LARTR	2.517e-68	85.71	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCAB_HORVU	4.746e-67	80.42	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA_PHAAU	5.248e-66	82.27	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]
RCA2_TOBAC	1.688e-64	81.43	Ribulose bisphosphate carboxylase/oxygenase activa...	[more]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D4N5G2_SOYBN	5.520e-90	87.08	Rubisco activase OS=Glycine max GN=RCA14 PE=2 SV=1	[more]
Q06B48_ACERU	6.748e-88	83.80	Chloroplast ribulose-1,5-bisphosphate carboxylase/...	[more]
Q06B50_ACERU	1.151e-87	83.80	Chloroplast ribulose-1,5-bisphosphate carboxylase/...	[more]
A9PFQ2_POPTR	2.564e-87	85.31	Putative uncharacterized protein OS=Populus tricho...	[more]
A8QIH7_MORAL	2.564e-87	85.31	Chloroplast ribulose-1,5-bisphosphate carboxylase/...	[more]
Q19RP2_9MAGN	3.349e-87	84.92	Ribulose-1,5-bisphosphate carboxylase/oxygenase ac...	[more]
B9HT80_POPTR	3.349e-87	85.88	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
A9PJ06_9ROSI	3.349e-87	85.88	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PGU7_POPTR	3.349e-87	85.88	Putative uncharacterized protein OS=Populus tricho...	[more]
Q9AXG0_GOSHI	4.374e-87	85.31	Ribulose-1,5-bisphosphate carboxylase/oxygenase ac...	[more]

BLAST of Cicer_arietinum_v1_Contig3542 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT2G39730.1	2.156e-81	78.53	\| Symbols: RCA \| rubisco activase \| chr2:16570951-...	[more]
AT2G39730.2	7.703e-63	74.83	\| Symbols: RCA \| rubisco activase \| chr2:16571046-...	[more]
AT2G39730.3	1.314e-62	76.92	\| Symbols: RCA \| rubisco activase \| chr2:16571174-...	[more]
AT1G73110.1	3.993e-27	45.60	\| Symbols: \| P-loop containing nucleoside triphos...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 56..67 score
None	No IPR available	SEG	seg	seg	coord: 40..53 score
None	No IPR available	SEG	seg	seg	coord: 24..51 score
None	No IPR available	SEG	seg	seg	coord: 1..17 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig3542 ID=Cicer_arietinum_v1_Contig3542; Name=Cicer_arietinum_v1_Contig3542; organism=Cicer arietinum; type=contig; length=803bp
ATTCTTTTTTTAAAAAAATTAGAGCATCCTTTATACTTCCATTTAATATA
TTTTAGTTATTGACAAAAAGTGATTATCATATGGCATGGAGGAAAAGAGA
AATGGAACCAATTCGATTATCATCTTAGTGCACAAAAAATCTGAATACAC
TATAAAGGACAACAATCCAAATTATCCAATATAAACAAGATGATGATGAT
GATAAAAGTATTTGATTATCTCAAGTCTTAACATCTCCTCTCTTTAGGAG
AATGCTTATATTCTTAAAGTGTGTATACGCAGGTACCATCATCACTTCTA
GCTGTTGGGTCGAAGTTTGTGGCATTTGGATCCGTGCAACCTTCAGGAAC
AGGAACATGTACTTGTTGGGCTGCCTGGCCATAGAAAGTTCCTCTCTTAA
TAGCATCATCATTAGCTTCACCAAGAGCAGCCTCACTCATATACTTGTCT
GCCAATTGGACTCTCTTCACATTCTCTTGTTCTTGAACAAGCATGTTACC
ATATTCCAATAGTTTCTCCACTGTCATCTTAGGCTGTTCAAATGTTGGAG
GCCCTTCCTTTGAGTTCACAAGCTTCTTTCCAATGGTTTCAACACCAATA
CCAGAAATCCACTTCCTCACTTCATCATCATATACTCTGGCTCTCAATGC
ACCAAAGAAATCAACGGATTGACCAGGGAAAGTATCAACAATCTTAACAA
TAGCCTCCTCAGAAATATTATCATGTTTAAAAATCCCTTTACAAACACCA
ACACGATCATCCCTTGTAGGTGCCCAATAGAATTTCTCCATACGTCCATC
ACG

Search form

Cicer_arietinum_v1_Contig3542