Cicer_arietinum_v1_Contig359

Contig Overview
NameCicer_arietinum_v1_Contig359
Unique NameCicer_arietinum_v1_Contig359
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length577
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
HO063687ESTHO063687:1..560 +Cicer arietinum unigene v1n/a
HO062352ESTHO062352:17..577 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO063687HO063687Cicer arietinumEST
HO062352HO062352Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. SwissProt
Match: PUS2_ORYSJ (RNA pseudourine synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0717400 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.031e-55
Identity = 98/155 (63.23%), Postives = 123/155 (79.35%), Query Frame = -2 
Query:   91 PTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 555
            P P +GR+EVP+ RDPN+R+RM A  G      ARHAASRYKV E+ AGG  ALVEW+LETGRTHQIRAHA+YLG+PLLGDE YGGTK+M LSLLRPRT    H +++ M+S++DRPCLHA  LGF+HPH+G+ + FSC PP DF E+L++L ++
Sbjct:  275 PNPNSGRIEVPIARDPNNRIRMIATPGS-GHRYARHAASRYKVREVFAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDETYGGTKSMALSLLRPRTPSRYHCDLSNMISKIDRPCLHAALLGFKHPHSGKILEFSCPPPDDFTEVLNELHQV 428
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. SwissProt
Match: PUS2_ARATH (RNA pseudourine synthase 2, chloroplastic OS=Arabidopsis thaliana GN=At1g76050 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.497e-54
Identity = 100/157 (63.69%), Postives = 123/157 (78.34%), Query Frame = -2 
Query:   88 VPTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIG 558
            VP+P  GR+E+P+GRD ++R+RM A+ G +   +ARHAASRYKVIE  AGG  ALVEW+LETGRTHQIRAHA+Y+GVPLLGDEVYGGTK+M LSLL+ R + S   E+ +++S +DRPCLHA+ LGF HP TGE V FSC PP D  EI+  LRR G
Sbjct:  273 VPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRGGRARHAASRYKVIETFAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVSRSDQEEIIELISRMDRPCLHAIVLGFTHPCTGEIVKFSCPPPSDLAEIVGLLRRSG 429
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. SwissProt
Match: Y723_CHLP8 (Uncharacterized RNA pseudouridine synthase Cpar_0723 OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_0723 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.910e-19
Identity = 60/158 (37.97%), Postives = 84/158 (53.16%), Query Frame = -2 
Query:   91 VPTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGE-MTKMVSEL-DRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 558
            VP   +G ++  +GR   +R  M     P    + +HA + Y+V+E L  G  +L++  L TGRTHQIR H ++LG  +LGDE YGG          PRT P    E  T+ + EL  R  LHA TL F+ P TGE + FS   P D   +L ++R +
Sbjct:  176 VPKAESGTIKTNIGRSHKNRKVMANF--PYEGAEGKHAITDYQVVEDL--GYFSLMDVTLHTGRTHQIRVHLQHLGHSILGDETYGGA--------TPRTLPFSKSEPFTRNLLELMSRQALHAQTLRFRQPTTGEPLSFSAPLPEDMELVLEKIRTV 321
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. SwissProt
Match: Y901_CHLAA (Uncharacterized RNA pseudouridine synthase Caur_0901 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=Caur_0901 PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18
Identity = 58/151 (38.41%), Postives = 77/151 (50.99%), Query Frame = -2 
Query:   97 PVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLR 549
            P  G ++ P+GRDP  RLRM  V         R A + Y++++    G  +L+E +LETGRTHQIR H R+LG P++GD VYG           PR +  LH         L R  LHA  LG  HP +G    F+   P D   +L QL+
Sbjct:  189 PETGTIDAPIGRDPRDRLRMAVVPD------GRPARTHYRLLDTF--GDYSLLEVQLETGRTHQIRVHLRHLGYPIVGDPVYG-----------PRRS-HLH---------LSRQFLHAAYLGLVHPRSGRWQEFTAPLPADLQIVLRQLQ 310
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. SwissProt
Match: RLUD_VIBCH (Ribosomal large subunit pseudouridine synthase D OS=Vibrio cholerae GN=rluD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18
Identity = 56/148 (37.84%), Postives = 75/148 (50.68%), Query Frame = -2 
Query:   97 GRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLR 540
            G ++ P+GR    R  M+       S   +HA + Y+V E     +   +  +LETGRTHQIR H  YL  PLLGD  YGG         R R       E+T+M+ + DR  LHA+ L F+HP TGE++ F    P D  E+   LR
Sbjct:  183 GMIDKPIGRHSTKRTLMSV------SPMGKHAVTHYRVAEHFREHT--RLRLRLETGRTHQIRVHMAYLQHPLLGDTAYGG---------RARIPKGATEELTEMIRDFDRQALHAVMLKFEHPVTGEELEFHAPVPDDMVEMTLALR 313
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. SwissProt
Match: YLYB_BACSU (Uncharacterized RNA pseudouridine synthase ylyB OS=Bacillus subtilis GN=ylyB PE=3 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 2.208e-18
Identity = 55/151 (36.42%), Postives = 70/151 (46.36%), Query Frame = -2 
Query:   88 GRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIG 540
            G ++ P+GRD   R  MT       ++   H   R++           LVE +LETGRTHQIR H +Y+G PL GD  YG           PR T   +G+            LHA  LGF HP TGE V F    P D  E++  LR+ G
Sbjct:  183 GTIDAPIGRDKKDRQSMTVTRDGKNAVTHFHVLERFQ--------DFTLVECQLETGRTHQIRVHMKYIGFPLAGDPKYG-----------PRKTIDFNGQ-----------ALHAGVLGFDHPRTGEYVEFEAPLPEDMAELIENLRKNG 303
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. SwissProt
Match: RLUD_RALSO (Ribosomal large subunit pseudouridine synthase D OS=Ralstonia solanacearum GN=rluD PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.766e-18
Identity = 56/153 (36.60%), Postives = 81/153 (52.94%), Query Frame = -2 
Query:  100 TPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEI--LAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQL 552
            TP AG ++ P+GRDP  R RM  +     +   + A + +K +++  L     +LV+ +LETGRTHQIR H    G PLLGD VY  T+N      RP+T  +       + +   R  LHA+ LG  HP +G+ VH+    P D  E++  L
Sbjct:  211 TPEAGTIDAPIGRDPRDRTRMAIIE----TASGKPARTHFKTLDVVDLGRAQVSLVQCQLETGRTHQIRVHFESEGHPLLGDPVY--TRNFRRG--RPQTIKA------PLPAPFARQALHAVRLGLVHPASGQSVHWHAGVPDDLAELMDAL 349
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. SwissProt
Match: RLUD_VIBVU (Ribosomal large subunit pseudouridine synthase D OS=Vibrio vulnificus GN=rluD PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.096e-17
Identity = 55/149 (36.91%), Postives = 73/149 (48.99%), Query Frame = -2 
Query:   94 GRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRR 540
            G+V+ P+GR    R  M        S   + A + ++V E     +   +  +LETGRTHQIR H  YL  PLLGD  YGG         R R       ++T M+   DR  LHA+ L F+HP TGE++ F    P D  E+   LRR
Sbjct:  183 GKVDKPIGRHATKRTLMAV------SPMGKPAVTHFRVAEHFREHT--RIRLRLETGRTHQIRVHMSYLQHPLLGDAAYGG---------RARIPAGASEDVTAMIRNFDRQALHAVMLRFEHPITGEEMEFHAPVPDDMVELTETLRR 314
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. SwissProt
Match: RLUD_VIBPA (Ribosomal large subunit pseudouridine synthase D OS=Vibrio parahaemolyticus GN=rluD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.188e-17
Identity = 59/149 (39.60%), Postives = 76/149 (51.01%), Query Frame = -2 
Query:   94 GRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRR 540
            G+V+ P+GR    R  M AVA PL     + A + Y+V E     +   +  +LETGRTHQIR H  YL  PLLGD  YGG         R R       E+T M+   DR  LHA+ L F+HP TGE++ F    P D   +   LR+
Sbjct:  183 GKVDQPIGRHSTKRTLM-AVA-PL----GKPAVTHYRVAEHFREHT--RIRLRLETGRTHQIRVHMSYLQHPLLGDTAYGG---------RARIPTGASQELTDMIRGFDRQALHAVMLRFEHPITGEELEFHAPVPDDMVAMTEALRK 314
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. SwissProt
Match: RLUD_NEIMA (Ribosomal large subunit pseudouridine synthase D OS=Neisseria meningitidis serogroup A GN=rluD PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.066e-16
Identity = 56/151 (37.09%), Postives = 73/151 (48.34%), Query Frame = -2 
Query:   97 PVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLR 549
            P  G++E  +GRDP++RL+M  V         + A +  KV+E     S   +E  LETGRTHQIR H R    PL GD VYG  ++     ++         E  K +    R  LHA  L F HP +GE V F    P D   +LS LR
Sbjct:  201 PFDGKIETQIGRDPHNRLKMAVV-----KFGGKPAVTHVKVLERYLAHS--YIECSLETGRTHQIRVHMREANHPLAGDPVYGNPRHPCGDTVK---------EAVKSLGA--RQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLR 333
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. TrEMBL
Match: A5AHP5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034413 PE=4 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.954e-65
Identity = 118/159 (74.21%), Postives = 136/159 (85.53%), Query Frame = -2 
Query:   82 VPTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIGRQ 558
            VPTP++GRVE+PVGRDPN+R+RMTAV GP  S +ARHAASRYKVIEILA G  ALVEW+LETGRTHQIRAHA+YLG+PLLGDEVYGGTKNM LSLLRPR   S HG++ ++VS LDRPCLHA+ LGF HP TG+ VHFSC+PP DF EILS LR+I  +
Sbjct:  414 VPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKISTE 572
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. TrEMBL
Match: B9GQ77_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_642899 PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.530e-59
Identity = 108/163 (66.26%), Postives = 134/163 (82.21%), Query Frame = -2 
Query:   70 VPTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIGRQ*VDF 558
            VP P+AGR++VP+GRD ++R+RM A+  P    +ARHAASRYKVIEILAGG  ALVEW+LETGRTHQIRAHA+Y+G+PLLGDEVYGGT+NM LSLLR RT PS H +++  +S L+RPCLHA+ LGF HP TG+++HFSC PP DF EILSQLR +G + + F
Sbjct:  281 VPAPMAGRIDVPIGRDVSNRIRMAAIVEPNRG-QARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDEVYGGTQNMALSLLRSRTQPSCHRQLSLSLSGLERPCLHALALGFTHPCTGKEIHFSCPPPPDFTEILSQLREMGTEKLSF 442
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. TrEMBL
Match: C5Z1X0_SORBI (Putative uncharacterized protein Sb10g030300 OS=Sorghum bicolor GN=Sb10g030300 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.995e-54
Identity = 96/156 (61.54%), Postives = 124/156 (79.49%), Query Frame = -2 
Query:   91 VPTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 558
            VP P +GR+E  + RDPN+R+RM A+AG      ARHAASRYKV E+  GG  ALVEW+LETGRTHQIRAHA+Y+G+PLLGDE YGGTK+M LSLLRPRT    H +++ ++S++DRPCLHA  LGF+HPH+G+ + FSC PP DF+E+L +LR++
Sbjct:  275 VPNPNSGRIEASIARDPNNRIRMIAIAGS-GHRYARHAASRYKVREVFVGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDETYGGTKSMALSLLRPRTPSKYHSDLSNLISKVDRPCLHAALLGFKHPHSGKILEFSCPPPDDFSEVLDELRKV 429
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. TrEMBL
Match: B8B2J0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24484 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.995e-54
Identity = 98/155 (63.23%), Postives = 123/155 (79.35%), Query Frame = -2 
Query:   91 PTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 555
            P P +GR+EVP+ RDPN+R+RM A  G      ARHAASRYKV E+ AGG  ALVEW+LETGRTHQIRAHA+YLG+PLLGDE YGGTK+M LSLLRPRT    H +++ M+S++DRPCLHA  LGF+HPH+G+ + FSC PP DF E+L++L ++
Sbjct:  275 PNPNSGRIEVPIARDPNNRIRMIATPGS-GHRYARHAASRYKVREVFAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDETYGGTKSMALSLLRPRTPSRYHCDLSNMISKIDRPCLHAALLGFKHPHSGKILEFSCPPPDDFTEVLNELHQV 428
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. TrEMBL
Match: D7KT91_ARALY (T4O12.25 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_339776 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.939e-52
Identity = 99/153 (64.71%), Postives = 121/153 (79.08%), Query Frame = -2 
Query:   88 VAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIG 546
            V GR+E+P+GRD ++R+RM A+ G L+  +ARHAASRYKVIE  AGG  ALVEW+LETGRTHQIRAHA+Y+GVPLLGDEVYGGTK+M LSLL+ R + S   E+ +++S +DRPCLHA+ LGF HP TGE V FSC PP D  EI+  LRR G
Sbjct:  766 VYGRIEIPIGRDSSNRIRMAAIPGGLSGGRARHAASRYKVIETFAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVSRSDQEEIVELISRMDRPCLHAIVLGFTHPCTGEIVKFSCPPPSDLAEIVGLLRRSG 918
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. TrEMBL
Match: B6TXP4_MAIZE (RNA binding protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.905e-51
Identity = 94/155 (60.65%), Postives = 123/155 (79.35%), Query Frame = -2 
Query:   91 PTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 555
            P P +GR+E  + RDPN+R+RMTA+AG      AR+AASRYKV E+ AGG  ALVEW+LETGRTHQIRAHA+Y+G+PLLGDE YGGT++M LSLLRPR+    H  ++ ++S++DRPCLHA +LGF+HP +G+ + FSC PP DF E+L +LRR+
Sbjct:  273 PNPNSGRIEASIARDPNNRIRMTAIAGS-GHRYARNAASRYKVREVFAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDETYGGTQSMALSLLRPRSPSKYHSGLSNLLSKVDRPCLHAASLGFKHPRSGKVLEFSCPPPDDFLEVLGELRRV 426
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. TrEMBL
Match: B9S051_RICCO (Ribosomal pseudouridine synthase, putative OS=Ricinus communis GN=RCOM_1298450 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.664e-45
Identity = 81/126 (64.29%), Postives = 108/126 (85.71%), Query Frame = -2 
Query:  181 VPTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLG 558
            VP+ + GR+++P+GRD N+R+RMTA+ GP+   +ARHAASR+KV+E LAGG  ALVEW+LETGRTHQIRAHA+Y+G+PLLGDEVYGGT++M LSLLRPR   + H E++ ++S+L+RPCLHA+ LG
Sbjct:  260 VPSALTGRIDIPIGRDVNNRIRMTAIPGPIKQGRARHAASRFKVVETLAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDEVYGGTRSMALSLLRPRIPSTCHSELSLLLSKLERPCLHALALG 385
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. TrEMBL
Match: B4FNR9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.402e-40
Identity = 78/125 (62.40%), Postives = 100/125 (80.00%), Query Frame = -2 
Query:  181 PTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLG 555
            P P +GR+E  + RDPN+R+RMTA+AG      AR+AASRYKV E+ AGG  ALVEW+LETGRTHQIRAHA+Y+G+PLLGDE YGGT++M LSLLRPR+    H  ++ ++S++DRPCLHA +LG
Sbjct:  273 PNPNSGRIEASIARDPNNRIRMTAIAGS-GHRYARNAASRYKVREVFAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDETYGGTQSMALSLLRPRSPSKYHSGLSNLLSKVDRPCLHAASLG 396
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. TrEMBL
Match: Q016F9_OSTTA (Ribosomal large subunit pseudouridine syn (ISS) OS=Ostreococcus tauri GN=Ot06g04410 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.500e-35
Identity = 79/153 (51.63%), Postives = 96/153 (62.75%), Query Frame = -2 
Query:  100 VPTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQL 558
            VP    GR+E PVGRDP  RLRM    G       R+AAS Y+VI  LA G+ +LVEW+LETGRTHQIR HA+++G P+LGDEVYGG     +  L  R    L      ++S +DRP LHA TLGF HP TGE + FS +PP DF+   S L
Sbjct:  273 VPKTSKGRIEAPVGRDPKDRLRMAVTPG-----SGRYAASNYEVIATLASGNASLVEWRLETGRTHQIRVHAKHIGHPILGDEVYGGGGGAAVDALARRGVFDLKAAKA-LLSRIDRPMLHARTLGFTHPRTGEAMDFSRDPPEDFDAFASAL 419
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. TrEMBL
Match: C1N564_MICPS (Predicted protein OS=Micromonas pusilla CCMP1545 GN=MICPUCDRAFT_36187 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.714e-34
Identity = 79/155 (50.97%), Postives = 96/155 (61.94%), Query Frame = -2 
Query:   97 PTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPR--TTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLR 555
            P    GRV+ P+GRDP  RL+M  V     S   R AAS YKV   LA G+ +LVEW+LETGRTHQIR HAR +G+P+LGDE YGG  N     LR +   TP+   E  ++     RP LHA TLGF+HP TGE++ F  EPP DF E+   LR
Sbjct:  265 PEQGEGRVDAPIGRDPRDRLKMAVVR---RSRGGRRAASNYKVRASLARGNASLVEWRLETGRTHQIRVHAREIGIPILGDETYGGAGNGAEERLRSKGAMTPA---EAKRVAKISRRPMLHAQTLGFRHPRTGEEMDFKAEPPEDFAEVFEALR 413
[Close]
BLAST of Cicer_arietinum_v1_Contig359 vs. TAIR peptide
Match: AT1G76050.2 (| Symbols: | Pseudouridine synthase family protein | chr1:28540858-28542826 FORWARD LENGTH=430)

HSP 1 Score: 211.46 bits (537), Expect = 2.647e-55
Identity = 100/157 (63.69%), Postives = 123/157 (78.34%), Query Frame = -2 
Query:   88 VPTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHARYLGVPLLGDEVYGGTKNMVLSLLRPRTTPSLHGEMTKMVSELDRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRIG 558
            VP+P  GR+E+P+GRD ++R+RM A+ G +   +ARHAASRYKVIE  AGG  ALVEW+LETGRTHQIRAHA+Y+GVPLLGDEVYGGTK+M LSLL+ R + S   E+ +++S +DRPCLHA+ LGF HP TGE V FSC PP D  EI+  LRR G
Sbjct:  273 VPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRGGRARHAASRYKVIETFAGGGSALVEWRLETGRTHQIRAHAKYMGVPLLGDEVYGGTKSMALSLLQKRVSRSDQEEIIELISRMDRPCLHAIVLGFTHPCTGEIVKFSCPPPSDLAEIVGLLRRSG 429
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BLAST of Cicer_arietinum_v1_Contig359 vs. TAIR peptide
Match: AT1G76050.1 (| Symbols: | Pseudouridine synthase family protein | chr1:28540858-28542019 FORWARD LENGTH=313)

HSP 1 Score: 53.1434 bits (126), Expect = 1.205e-7
Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = -2 
Query:  436 VPTPVAGRVEVPVGRDPNSRLRMTAVAGPLTSMKARHAASR 558
            VP+P  GR+E+P+GRD ++R+RM A+ G +   +ARHAASR
Sbjct:  273 VPSPPQGRIEIPIGRDSSNRIRMAAIPGGVRGGRARHAASR 313
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig359 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PUS2_ORYSJ5.031e-5563.23RNA pseudourine synthase 2, chloroplastic OS=Oryza... [more]
PUS2_ARATH2.497e-5463.69RNA pseudourine synthase 2, chloroplastic OS=Arabi... [more]
Y723_CHLP89.910e-1937.97Uncharacterized RNA pseudouridine synthase Cpar_07... [more]
Y901_CHLAA1.294e-1838.41Uncharacterized RNA pseudouridine synthase Caur_09... [more]
RLUD_VIBCH1.294e-1837.84Ribosomal large subunit pseudouridine synthase D O... [more]
YLYB_BACSU2.208e-1836.42Uncharacterized RNA pseudouridine synthase ylyB OS... [more]
RLUD_RALSO3.766e-1836.60Ribosomal large subunit pseudouridine synthase D O... [more]
RLUD_VIBVU1.096e-1736.91Ribosomal large subunit pseudouridine synthase D O... [more]
RLUD_VIBPA3.188e-1739.60Ribosomal large subunit pseudouridine synthase D O... [more]
RLUD_NEIMA2.066e-1637.09Ribosomal large subunit pseudouridine synthase D O... [more]
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BLAST of Cicer_arietinum_v1_Contig359 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A5AHP5_VITVI3.954e-6574.21Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GQ77_POPTR5.530e-5966.26Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C5Z1X0_SORBI6.995e-5461.54Putative uncharacterized protein Sb10g030300 OS=So... [more]
B8B2J0_ORYSI6.995e-5463.23Putative uncharacterized protein OS=Oryza sativa s... [more]
D7KT91_ARALY2.939e-5264.71T4O12.25 OS=Arabidopsis lyrata subsp. lyrata GN=AR... [more]
B6TXP4_MAIZE1.905e-5160.65RNA binding protein OS=Zea mays PE=2 SV=1[more]
B9S051_RICCO2.664e-4564.29Ribosomal pseudouridine synthase, putative OS=Rici... [more]
B4FNR9_MAIZE4.402e-4062.40Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q016F9_OSTTA2.500e-3551.63Ribosomal large subunit pseudouridine syn (ISS) OS... [more]
C1N564_MICPS4.714e-3450.97Predicted protein OS=Micromonas pusilla CCMP1545 G... [more]
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BLAST of Cicer_arietinum_v1_Contig359 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G76050.22.647e-5563.69| Symbols: | Pseudouridine synthase family protei... [more]
AT1G76050.11.205e-753.66| Symbols: | Pseudouridine synthase family protei... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA and RluB/C/D/E/FPFAMPF00849PseudoU_synth_2coord: 41..78
score: 2.6
IPR020103Pseudouridine synthase, catalytic domainSUPERFAMILY55120Pseudouridine synthasecoord: 7..160
score: 1.8
NoneNo IPR availablePANTHERPTHR10436RIBOSOMAL PSEUDOURIDINE SYNTHASEcoord: 13..142
score: 3.2

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig359 ID=Cicer_arietinum_v1_Contig359; Name=Cicer_arietinum_v1_Contig359; organism=Cicer arietinum; type=contig; length=577bp
GGTACATAATAATGATAAGAAGGCCAACCCGGCTTACAATACCCTTTTAA
AAATGTGACCATTTAGAGAGAAATCCACTCACTGCCTGCCAATTCTACGA
AGCTGGCTCAAAATCTCATTAAAATCTACAGGGGGTTCGCATGAAAAGTG
CACCTGCTCCCCTGTATGAGGATGCTGAAACCCGAGAGTCATAGCATGAA
GGCAAGGCCTATCTAGCTCAGAAACCATTTTAGTCATTTCCCCATGCAAA
CTCGGAGTTGTTCGCGGCCTTAGCAGTGACAAGACCATGTTTTTCGTCCC
TCCATATACCTCATCACCAAGCAGAGGTACACCCAAATACCTGGCATGTG
CACGGATCTGATGAGTGCGTCCGGTTTCCAACTTCCACTCAACCAATGCA
CAGCTACCCCCAGCAAGTATCTCAATTACTTTATACCTACTAGCAGCATG
ACGGGCCTTCATAGAGGTAAGTGGTCCAGCTACAGCAGTCATACGAAGCC
GGCTATTAGGATCACGACCAACCGGAACCTCAACACGCCCAGCAACTGGA
GTAGGTACCTGCCCGGGCGGCCGCTCG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0009451RNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf