Cicer_arietinum_v1_Contig3601

Contig Overview


Name	Cicer_arietinum_v1_Contig3601
Unique Name	Cicer_arietinum_v1_Contig3601
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	799

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
EH059233	EST	EH059233:1..473 +	Cicer arietinum unigene v1	n/a
EH059073	EST	EH059073:1..474 +	Cicer arietinum unigene v1	n/a
GR407313	EST	GR407313:126..799 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
EH059233	EH059233	Cicer arietinum	EST
EH059073	EH059073	Cicer arietinum	EST
GR407313	GR407313	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. SwissProt
Match: SF3A3_MOUSE (Splicing factor 3A subunit 3 OS=Mus musculus GN=Sf3a3 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 6.610e-53
Identity = 96/185 (51.89%), Postives = 122/185 (65.95%), Query Frame = -2

Query:  229 KEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 783
            K+IA +EA++ +  ++L E    T +NV +KQA T                         IYNP  LP+GWDGKPIPYWLYKLHGL   + CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F  +T IE+A  LW K++ ++   +W+PD EEEYED  GN+ NKKTY DL+RQGL+
Sbjct:  318 KDIAFLEAQIYEYVEILGEQRQLTHENVQRKQART-GEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. SwissProt
Match: SF3A3_HUMAN (Splicing factor 3A subunit 3 OS=Homo sapiens GN=SF3A3 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 8.633e-53
Identity = 96/185 (51.89%), Postives = 122/185 (65.95%), Query Frame = -2

Query:  229 KEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 783
            K+IA +EA++ +  ++L E    T +NV +KQA T                         IYNP  LP+GWDGKPIPYWLYKLHGL   + CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F  +T IE+A  LW K++ ++   +W+PD EEEYED  GN+ NKKTY DL+RQGL+
Sbjct:  318 KDIAFLEAQIYEYVEILGEQRHLTHENVQRKQART-GEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKLQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. SwissProt
Match: NOI_DROME (Splicing factor 3A subunit 3 OS=Drosophila melanogaster GN=noi PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.281e-52
Identity = 96/185 (51.89%), Postives = 121/185 (65.41%), Query Frame = -2

Query:  229 KEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 783
            KEIA +EA + K  DLL E  A TK+NV +KQA T                          YNP  LP+GWDGKPIPYWLYKLHGL   + CEICGN++Y G +AF+RHF EWRH HGMRCLGIPNT +F  +T IE+A  LW+K++ ++   +W  D EEE+ED  GN+ N+KT+ DL+RQGL+
Sbjct:  319 KEIAQLEALLYKYADLLSEQRAATKENVQRKQARTGGERDDSDVEASESDNEDDPDADDVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQGLL 503

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. SwissProt
Match: SAP61_SCHPO (CWF complex protein sap61 OS=Schizosaccharomyces pombe GN=sap61 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.356e-42
Identity = 87/200 (43.50%), Postives = 119/200 (59.50%), Query Frame = -2

Query:  229 KEIALMEAKMNKLCDLLDETIARTKDNVIKKQALT---------------YXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 783
            K IA +E  + KL  LLD+    T++NV+++Q LT               +                       +IYNPLKLP+GWDGKPIP+WL+KLHGLG+EF CEICGNY Y GR+AF++HF E RH +G++CLGI  +  FN+ITSI+EA +LW+K +      +       E ED EGN+ ++K Y DL+ QGL+
Sbjct:  293 KAIARIEFLIKKLTSLLDDVRKDTRENVVRRQTLTAAERLAEVEAAEREAFEQSTPSVSVEGNQDEESDQDDEEKIYNPLKLPLGWDGKPIPFWLWKLHGLGKEFPCEICGNYVYMGRKAFDKHFTEQRHIYGLKCLGISPSPLFNQITSIDEALQLWQKYKVDSKKRETTMASLNEMEDDEGNVMSEKVYNDLKAQGLL 492

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. SwissProt
Match: PRP9_YEAST (Pre-mRNA-splicing factor PRP9 OS=Saccharomyces cerevisiae GN=PRP9 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.288e-31
Identity = 65/133 (48.87%), Postives = 87/133 (65.41%), Query Frame = -2

Query:  229 LPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVN--------------KWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 585
            +P+G DG P+PYWLYKLHGL +E++CEIC N  Y GRR FERHF E RH + +RCLGI  +  F  IT I+EA+ELWK +Q +  +               K   +LE E ED+EGN+ +KK Y +L++QGL+
Sbjct:  398 MPLGPDGLPMPYWLYKLHGLDREYRCEICSNKVYNGRRTFERHFNEERHIYHLRCLGIEPSSVFKGITKIKEAQELWKNMQGQSQLTSIAAVPPKPNPSQLKVPTELELEEEDEEGNVMSKKVYDELKKQGLV 530

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
Match: B7FLB9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.843e-93
Identity = 163/190 (85.79%), Postives = 166/190 (87.37%), Query Frame = -2

Query:  229 QEGNLKEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 798
            Q+GNLKEIALMEAKMNKLCDLLDETI RTKDN++KKQALTY                       QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI
Sbjct:   63 QDGNLKEIALMEAKMNKLCDLLDETITRTKDNIVKKQALTYEEIEAEREEEETQEDSESEDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 252

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
Match: B7FLM9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.725e-91
Identity = 160/190 (84.21%), Postives = 164/190 (86.32%), Query Frame = -2

Query:  229 QEGNLKEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 798
            Q+GNLKE+ALMEAKMNKLCDLLDETI RTKDN++KKQALTY                       QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGR AFERHFKEW HQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI
Sbjct:  179 QDGNLKEVALMEAKMNKLCDLLDETITRTKDNIVKKQALTYEEIEAEREEEETQEDSESEDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRCAFERHFKEWCHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 368

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
Match: B9IDV2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_251016 PE=4 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 3.977e-88
Identity = 154/187 (82.35%), Postives = 159/187 (85.03%), Query Frame = -2

Query:  229 NLKEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 789
            N KEIALME KMNKLCDLLDETI RTK+N++KKQALTY                       QIYNPLKLPMGWDGKPIPYWLYKLHGLGQE KCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEA+ELWK+IQ RQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI
Sbjct:  309 NSKEIALMETKMNKLCDLLDETIVRTKENIVKKQALTYDEMEAEREEEETQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQELKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAQELWKRIQARQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 495

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
Match: B9I597_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_569530 PE=4 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 5.194e-88
Identity = 154/187 (82.35%), Postives = 161/187 (86.10%), Query Frame = -2

Query:  229 NLKEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 789
            N KEIALMEAK+NKLCDLLDETI RTK+NV+KKQALTY                       QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSI+EA+ELWK IQ+RQGVNKWRPDLEEEYEDKEGNIYN+KTYTDLQRQGLI
Sbjct:  323 NSKEIALMEAKINKLCDLLDETIVRTKENVVKKQALTYDEMEAEREEEETQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIKEAQELWKGIQERQGVNKWRPDLEEEYEDKEGNIYNRKTYTDLQRQGLI 509

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
Match: B9RII3_RICCO (Splicing factor 3a, putative OS=Ricinus communis GN=RCOM_1579390 PE=4 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 1.511e-87
Identity = 152/187 (81.28%), Postives = 160/187 (85.56%), Query Frame = -2

Query:  229 NLKEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 789
            N KEIAL EAK+ +LCDLLDETI RTK+N++KKQALTY                       QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWK+IQ+RQGVNKWRPDLEEEYED+EGNIYNKKTYTDLQRQGLI
Sbjct:  273 NSKEIALTEAKITRLCDLLDETIVRTKENIVKKQALTYDEMEAEREEEETQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGVNKWRPDLEEEYEDREGNIYNKKTYTDLQRQGLI 459

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
Match: D7LZ45_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487419 PE=4 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.847e-85
Identity = 148/187 (79.14%), Postives = 159/187 (85.03%), Query Frame = -2

Query:  229 NLKEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 789
            N KEIAL EAK+ KLC+LLDETI RTK NV+KKQ+LTY                       +IYNPLKLP+GWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWK+IQ+RQGVNKWRP+LEEEYED+EGNIYNKKTY+DLQRQGLI
Sbjct:  322 NAKEIALTEAKVKKLCNLLDETIERTKQNVVKKQSLTYEEMEGEREGEEANAESESDDEDGEIYNPLKLPIGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGVNKWRPELEEEYEDREGNIYNKKTYSDLQRQGLI 508

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
Match: Q9FG01_ARATH (Putative splicing factor 3a OS=Arabidopsis thaliana GN=At5g06160 PE=1 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 2.413e-85
Identity = 147/187 (78.61%), Postives = 158/187 (84.49%), Query Frame = -2

Query:  229 NLKEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 789
            N KEIAL EAK+ KLC+LLDETI RTK N++KKQ+LTY                        IYNPLKLP+GWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWK+IQ+RQGVNKWRP+LEEEYED+EGNIYNKKTY+DLQRQGLI
Sbjct:  318 NAKEIALTEAKVKKLCNLLDETIERTKQNIVKKQSLTYEEMEGEREGEEANTELESDDEDGLIYNPLKLPIGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGVNKWRPELEEEYEDREGNIYNKKTYSDLQRQGLI 504

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
Match: C0Z3I0_ARATH (AT5G06160 protein OS=Arabidopsis thaliana GN=AT5G06160 PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 2.413e-85
Identity = 147/187 (78.61%), Postives = 158/187 (84.49%), Query Frame = -2

Query:  229 NLKEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 789
            N KEIAL EAK+ KLC+LLDETI RTK N++KKQ+LTY                        IYNPLKLP+GWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWK+IQ+RQGVNKWRP+LEEEYED+EGNIYNKKTY+DLQRQGLI
Sbjct:  176 NAKEIALTEAKVKKLCNLLDETIERTKQNIVKKQSLTYEEMEGEREGEEANTELESDDEDGLIYNPLKLPIGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGVNKWRPELEEEYEDREGNIYNKKTYSDLQRQGLI 362

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
Match: Q10DW3_ORYSJ (Os03g0717600 protein OS=Oryza sativa subsp. japonica GN=Os03g0717600 PE=4 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 8.581e-83
Identity = 145/185 (78.38%), Postives = 154/185 (83.24%), Query Frame = -2

Query:  229 KEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 783
            KEIALME KM +LC+LLDE I RTK+N  KK  LTY                       QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGN+SYWGRRA+ERHFKEWRHQHGMRCLGIPNTKNFNEITSI+EAKELW+KIQQRQG+NKWRPDLEEEYED+EGNIYNKKTYTDLQRQGLI
Sbjct:  323 KEIALMEVKMRRLCELLDEIIVRTKENAEKKLTLTYEEMEAEREEEEVQADSESDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIQEAKELWEKIQQRQGLNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 507

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
Match: Q10DW2_ORYSJ (Splicing factor 3A subunit 3, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g50850 PE=4 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 8.581e-83
Identity = 145/185 (78.38%), Postives = 154/185 (83.24%), Query Frame = -2

Query:  229 KEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 783
            KEIALME KM +LC+LLDE I RTK+N  KK  LTY                       QIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGN+SYWGRRA+ERHFKEWRHQHGMRCLGIPNTKNFNEITSI+EAKELW+KIQQRQG+NKWRPDLEEEYED+EGNIYNKKTYTDLQRQGLI
Sbjct:  194 KEIALMEVKMRRLCELLDEIIVRTKENAEKKLTLTYEEMEAEREEEEVQADSESDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIQEAKELWEKIQQRQGLNKWRPDLEEEYEDQEGNIYNKKTYTDLQRQGLI 378

[Close]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TAIR peptide
Match: AT5G06160.1 (| Symbols: ATO | splicing factor-related | chr5:1862623-1866298 REVERSE LENGTH=504)

HSP 1 Score: 319.316 bits (817), Expect = 1.532e-87
Identity = 147/187 (78.61%), Postives = 158/187 (84.49%), Query Frame = -2

Query:  229 NLKEIALMEAKMNKLCDLLDETIARTKDNVIKKQALTYXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 789
            N KEIAL EAK+ KLC+LLDETI RTK N++KKQ+LTY                        IYNPLKLP+GWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWK+IQ+RQGVNKWRP+LEEEYED+EGNIYNKKTY+DLQRQGLI
Sbjct:  318 NAKEIALTEAKVKKLCNLLDETIERTKQNIVKKQSLTYEEMEGEREGEEANTELESDDEDGLIYNPLKLPIGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGVNKWRPELEEEYEDREGNIYNKKTYSDLQRQGLI 504

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig3601 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig3601 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig3601 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 5


Match Name	E-value	Identity	Description
SF3A3_MOUSE	6.610e-53	51.89	Splicing factor 3A subunit 3 OS=Mus musculus GN=Sf...	[more]
SF3A3_HUMAN	8.633e-53	51.89	Splicing factor 3A subunit 3 OS=Homo sapiens GN=SF...	[more]
NOI_DROME	3.281e-52	51.89	Splicing factor 3A subunit 3 OS=Drosophila melanog...	[more]
SAP61_SCHPO	2.356e-42	43.50	CWF complex protein sap61 OS=Schizosaccharomyces p...	[more]
PRP9_YEAST	9.288e-31	48.87	Pre-mRNA-splicing factor PRP9 OS=Saccharomyces cer...	[more]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FLB9_MEDTR	1.843e-93	85.79	Putative uncharacterized protein OS=Medicago trunc...	[more]
B7FLM9_MEDTR	1.725e-91	84.21	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9IDV2_POPTR	3.977e-88	82.35	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9I597_POPTR	5.194e-88	82.35	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RII3_RICCO	1.511e-87	81.28	Splicing factor 3a, putative OS=Ricinus communis G...	[more]
D7LZ45_ARALY	1.847e-85	79.14	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9FG01_ARATH	2.413e-85	78.61	Putative splicing factor 3a OS=Arabidopsis thalian...	[more]
C0Z3I0_ARATH	2.413e-85	78.61	AT5G06160 protein OS=Arabidopsis thaliana GN=AT5G0...	[more]
Q10DW3_ORYSJ	8.581e-83	78.38	Os03g0717600 protein OS=Oryza sativa subsp. japoni...	[more]
Q10DW2_ORYSJ	8.581e-83	78.38	Splicing factor 3A subunit 3, putative, expressed ...	[more]

BLAST of Cicer_arietinum_v1_Contig3601 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G06160.1	1.532e-87	78.61	\| Symbols: ATO \| splicing factor-related \| chr5:18...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 4..13 score
None	No IPR available	SEG	seg	seg	coord: 17..30 score
None	No IPR available	SEG	seg	seg	coord: 8..20 score: NAcoord: 59..74 score
None	No IPR available	PANTHER	PTHR12786	SPLICING FACTOR SF3A-RELATED	coord: 6..190 score: 5.4
None	No IPR available	PANTHER	PTHR12786:SF2	SPLICING FACTOR 3A	coord: 6..190 score: 5.4
None	No IPR available	PFAM	PF11931	DUF3449	coord: 10..189 score: 9.5
None	No IPR available	SEG	seg	seg	coord: 42..65 score
None	No IPR available	SEG	seg	seg	coord: 30..39 score
IPR000690	Zinc finger, C2H2-type matrin	PROFILE	PS50171	ZF_MATRIN	coord: 95..126 score: 9

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig3601 ID=Cicer_arietinum_v1_Contig3601; Name=Cicer_arietinum_v1_Contig3601; organism=Cicer arietinum; type=contig; length=799bp
ACAATGCGACAGCGATGAGAATCTGTGTTTCACAAAATATGGCTCCTTGT
CTATCCCCACTCTCCTCCTTGGTAGTGCTAAATATTTTGTTAAGATGCAA
CCGTTCCCCTATTAACCCTACCGAAAACAAATTGCTTCTACTTCATAAAT
GAGGTAAAAACATGTTTTTTTCTCTCCTTTTACTAAGAAGAATTGGAAAG
AAGATTCTTCGAAGTTGCTTTGTTTTCATATCAGTCCCTGGCGTTGTAAA
TCAGTGTATGTCTTCTTATTATAGATGTTGCCTTCTTTGTCTTCATACTC
TTCCTCGAGATCTGGGCGCCACTTGTTCACTCCTTGTCTCTGCTGTATCT
TCTTCCAGAGCTCCTTTGCTTCCTCAATTGATGTGATTTCATTGAAGTTC
TTTGTATTTGGAATACCAAGACACCGCATCCCATGTTGATGACGCCATTC
TTTAAAATGTCGTTCAAAAGCACGACGCCCCCAATAACTGTAGTTCCCAC
AAATCTCACACTTAAATTCCTGACCAAGACCATGTAGCTTATACAGCCAA
TAAGGTATAGGCTTCCCATCCCATCCCATTGGTAATTTTAAGGGATTATA
AATCTGCTGCTCATCATCTTCGCTTTCAGAATCCTCTTGTGTCTCTTCCT
CCTCACGTTCTGCTTCAATTTCCTCATAAGTTAAGGCTTGCTTCTTTATA
ACATTGTCTTTTGTTCGAGCAATTGTCTCGTCTAACAAATCACACAGTTT
ATTCATTTTGGCCTCCATTAATGCAATTTCTTTTAAATTTCCTTCTTGT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR000690	Matrin/U1-C_Znf_C2H2

Search form

Cicer_arietinum_v1_Contig3601