Cicer_arietinum_v1_Contig3604
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Cicer_arietinum_v1_Contig3604 vs. TrEMBL
Match: B9GJM4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_829626 PE=4 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.088e-31 Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRTEVEQSTSRFGRQWVYGRIYLVRRSRRQR 241 L+GLWRN L ALKG+CPNCGEEVFAFV++D++N+SPHRA CHVCE LLEFRT+VEQ+TSR GRQWVYGRIYLV R RRQR Sbjct: 214 LQGLWRNDLVALKGACPNCGEEVFAFVKSDQSNDSPHRADCHVCESLLEFRTKVEQTTSRVGRQWVYGRIYLVSR-RRQR 292
BLAST of Cicer_arietinum_v1_Contig3604 vs. TrEMBL
Match: D7MSE5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496067 PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.164e-31 Identity = 61/80 (76.25%), Postives = 69/80 (86.25%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRTEVEQSTSRFGRQWVYGRIYLVRRSRRQR 241 L+GLWRN L ALKG CPNCGEEVFAFVR+D++N S H+A CHVCEC LEFRT+VE+STSR GR+WVYGRIYLV R RR R Sbjct: 215 LKGLWRNDLTALKGDCPNCGEEVFAFVRSDQSNRSAHKADCHVCECTLEFRTKVEKSTSRLGRKWVYGRIYLVSRPRRDR 294
BLAST of Cicer_arietinum_v1_Contig3604 vs. TrEMBL
Match: Q8LDH1_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At5g59400 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.202e-30 Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRTEVEQSTSRFGRQWVYGRIYLVRRSRRQR 241 L+GLWRN L ALKG CPNCGEEVFAFVR+D++N S H+A CHVCEC LEFRT+VE+S SR GR+WVYGRIYLV R RR R Sbjct: 215 LKGLWRNDLTALKGDCPNCGEEVFAFVRSDQSNRSAHKADCHVCECTLEFRTKVEKSASRLGRKWVYGRIYLVSRPRRDR 294
BLAST of Cicer_arietinum_v1_Contig3604 vs. TrEMBL
Match: B9T4C5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0203230 PE=4 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.202e-30 Identity = 62/80 (77.50%), Postives = 71/80 (88.75%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRTEVEQSTSRFGRQWVYGRIYLVRRSRRQR 241 L+GLWRN L ALKG+CPNCGEEVFAFV++D++NNSPHRA CHVCE LLEFRT+VE++ SR GR WVYGRIYLV R RRQR Sbjct: 207 LQGLWRNDLVALKGACPNCGEEVFAFVKSDQSNNSPHRADCHVCESLLEFRTKVERTDSRLGRNWVYGRIYLVSR-RRQR 285
BLAST of Cicer_arietinum_v1_Contig3604 vs. TrEMBL
Match: Q93V65_ARATH (AT5g59400/f2o15_60 OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.962e-29 Identity = 60/82 (73.17%), Postives = 68/82 (82.93%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRT--EVEQSTSRFGRQWVYGRIYLVRRSRRQR 241 L+GLWRN L ALKG CPNCGEEVFAFVR+D++N S H+A CHVCEC LEFRT EV++S SR GR+WVYGRIYLV R RR R Sbjct: 71 LKGLWRNDLTALKGDCPNCGEEVFAFVRSDQSNRSAHKADCHVCECTLEFRTKVEVDKSASRLGRKWVYGRIYLVSRPRRDR 152
BLAST of Cicer_arietinum_v1_Contig3604 vs. TrEMBL
Match: B9HPG2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_723247 PE=4 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.962e-29 Identity = 58/75 (77.33%), Postives = 67/75 (89.33%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRTEVEQSTSRFGRQWVYGRIYLVRR 226 L+GLWRN L ALKG+CPNCGEEVFAFV++D++NNS HRA CHVCE LLEFRTEVEQ+ SR GR+WV+GRIYLV R Sbjct: 212 LQGLWRNDLVALKGACPNCGEEVFAFVKSDQSNNSTHRADCHVCESLLEFRTEVEQTISRVGRRWVFGRIYLVSR 286
BLAST of Cicer_arietinum_v1_Contig3604 vs. TrEMBL
Match: D7SKE0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024939001 PE=4 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 8.917e-26 Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRTEVEQSTSRFGRQWVYGRIYLVRRSRR 235 L+GLWRN L ALKG+CPNCGEEVFAFV++ + N+SPH A CHVCE LEF T+VEQST GR+WVYGRIYLV RS R Sbjct: 211 LQGLWRNDLVALKGACPNCGEEVFAFVKSGQPNSSPHSADCHVCESSLEFSTKVEQST--LGRRWVYGRIYLVPRSGR 286
BLAST of Cicer_arietinum_v1_Contig3604 vs. TrEMBL
Match: A5ATD4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021080 PE=4 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 8.917e-26 Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRTEVEQSTSRFGRQWVYGRIYLVRRSRR 235 L+GLWRN L ALKG+CPNCGEEVFAFV++ + N+SPH A CHVCE LEF T+VEQST GR+WVYGRIYLV RS R Sbjct: 977 LQGLWRNDLVALKGACPNCGEEVFAFVKSGQPNSSPHSADCHVCESSLEFSTKVEQST--LGRRWVYGRIYLVPRSGR 1052
BLAST of Cicer_arietinum_v1_Contig3604 vs. TrEMBL
Match: C5YYH2_SORBI (Putative uncharacterized protein Sb09g001180 OS=Sorghum bicolor GN=Sb09g001180 PE=4 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.196e-24 Identity = 50/80 (62.50%), Postives = 64/80 (80.00%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRTEVEQSTSRFGRQWVYGRIYLVRRSRRQR 241 L GL N L ALKGSCPNCGE+VFAFV+TDK+ +PHRA+CHVCEC LE+RT++E+S S R WVYGR+YLV++ ++ Sbjct: 69 LRGLLTNNLVALKGSCPNCGEQVFAFVKTDKSVRAPHRAECHVCECPLEYRTKIEKSLSGPRRSWVYGRVYLVKQGHPRK 148
BLAST of Cicer_arietinum_v1_Contig3604 vs. TrEMBL
Match: Q94HI8_ORYSA (Putative uncharacterized protein OS=Oryza sativa PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.090e-23 Identity = 49/80 (61.25%), Postives = 63/80 (78.75%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRTEVEQSTSRFGRQWVYGRIYLVRRSRRQR 241 L+GL N L ALKGSCPNCGE+VFAFV+TD + +PHRA+CHVC C LE+RT+VE+S S R WVYGR+YLV++ ++ Sbjct: 187 LQGLLTNNLVALKGSCPNCGEQVFAFVKTDNSIKAPHRAECHVCSCPLEYRTKVEKSLSGTRRTWVYGRVYLVKQGHPRK 266
BLAST of Cicer_arietinum_v1_Contig3604 vs. TAIR peptide
Match: AT5G59400.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 97 Blast hits to 97 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:23957756-23959518 FORWARD LENGTH=299) HSP 1 Score: 135.961 bits (341), Expect = 4.661e-33 Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRTEVEQSTSRFGRQWVYGRIYLVRRSRRQR 241 L+GLWRN L ALKG CPNCGEEVFAFVR+D++N S H+A CHVCEC LEFRT+VE+S SR GR+WVYGRIYLV R RR R Sbjct: 215 LKGLWRNDLTALKGDCPNCGEEVFAFVRSDQSNRSAHKADCHVCECTLEFRTKVEKSASRLGRKWVYGRIYLVSRPRRDR 294
BLAST of Cicer_arietinum_v1_Contig3604 vs. TAIR peptide
Match: AT5G59400.2 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:23957756-23959518 FORWARD LENGTH=301) HSP 1 Score: 131.339 bits (329), Expect = 1.148e-31 Identity = 60/82 (73.17%), Postives = 68/82 (82.93%), Query Frame = 2 Query: 2 LEGLWRNGLAALKGSCPNCGEEVFAFVRTDKANNSPHRAQCHVCECLLEFRT--EVEQSTSRFGRQWVYGRIYLVRRSRRQR 241 L+GLWRN L ALKG CPNCGEEVFAFVR+D++N S H+A CHVCEC LEFRT EV++S SR GR+WVYGRIYLV R RR R Sbjct: 215 LKGLWRNDLTALKGDCPNCGEEVFAFVRSDQSNRSAHKADCHVCECTLEFRTKVEVDKSASRLGRKWVYGRIYLVSRPRRDR 296 The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig3604 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of Cicer_arietinum_v1_Contig3604 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig3604 ID=Cicer_arietinum_v1_Contig3604; Name=Cicer_arietinum_v1_Contig3604; organism=Cicer arietinum; type=contig; length=351bpback to top |