Cicer_arietinum_v1_Contig3605

Contig Overview


Name	Cicer_arietinum_v1_Contig3605
Unique Name	Cicer_arietinum_v1_Contig3605
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	1066

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
EH059205	EST	EH059205:1..536 +	Cicer arietinum unigene v1	n/a
HO065814	EST	HO065814:277..625 +	Cicer arietinum unigene v1	n/a
HO065528	EST	HO065528:277..625 +	Cicer arietinum unigene v1	n/a
HO065884	EST	HO065884:311..625 +	Cicer arietinum unigene v1	n/a
HO063765	EST	HO063765:241..744 +	Cicer arietinum unigene v1	n/a
HO063761	EST	HO063761:325..787 +	Cicer arietinum unigene v1	n/a
HO067721	EST	HO067721:375..884 +	Cicer arietinum unigene v1	n/a
HO063292	EST	HO063292:602..932 +	Cicer arietinum unigene v1	n/a
HO062521	EST	HO062521:404..1067 -	Cicer arietinum unigene v1	n/a
FE668456	EST	FE668456:729..1067 -	Cicer arietinum unigene v1	n/a
HO062458	EST	HO062458:655..1051 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
EH059205	EH059205	Cicer arietinum	EST
HO065814	HO065814	Cicer arietinum	EST
HO065528	HO065528	Cicer arietinum	EST
HO065884	HO065884	Cicer arietinum	EST
HO063765	HO063765	Cicer arietinum	EST
HO063761	HO063761	Cicer arietinum	EST
HO067721	HO067721	Cicer arietinum	EST
HO063292	HO063292	Cicer arietinum	EST
HO062521	HO062521	Cicer arietinum	EST
FE668456	FE668456	Cicer arietinum	EST
HO062458	HO062458	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. SwissProt
Match: YOF7_SCHPO (Uncharacterized RING finger protein P4H10.07 OS=Schizosaccharomyces pombe GN=SPBP4H10.07 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.642e-8
Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 2

Query:  665 GWRECCCVCLCGFEANQEVSELA-CKHFFHRVCLDKWFDNKHSTCPLCRS 811
            G  E C VCL  FE N E   L  C HFFHR C+D+W  +  ++CPLCR+
Sbjct:  520 GTDERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCRT 569

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. SwissProt
Match: RHA2A_ARATH (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana GN=RHA2A PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 4.506e-8
Identity = 25/55 (45.45%), Postives = 32/55 (58.18%), Query Frame = 2

Query:  647 RSGSGCGWRECCCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCRS 811
            R G G G    C VCL   +  +EV +L C+H FH+ CL+ W    + TCPLCRS
Sbjct:   75 RCGDGGGGGSDCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRS 129

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. SwissProt
Match: RNF43_MOUSE (RING finger protein 43 OS=Mus musculus GN=Rnf43 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 5.885e-8
Identity = 27/71 (38.03%), Postives = 39/71 (54.93%), Query Frame = 2

Query:  605 VSIRQYKSLCNKIGR----SGSGCGWRECCCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLC 805
            ++ R+Y++ C +       SGS C     C +CL  F   QE+  ++C H FHR C+D W   +H TCPLC
Sbjct:  243 LATRRYQAGCRRARAEWPDSGSSCSSTPVCAICLEEFSEGQELRVISCLHEFHRTCVDPWL-YQHRTCPLC 312

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. SwissProt
Match: RNF43_HUMAN (RING finger protein 43 OS=Homo sapiens GN=RNF43 PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 5.885e-8
Identity = 27/71 (38.03%), Postives = 40/71 (56.34%), Query Frame = 2

Query:  605 VSIRQYKSLCNKIGR----SGSGCGWRECCCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLC 805
            ++ R+Y++ C +       SGS C     C +CL  F   QE+  ++C H FHR C+D W  ++H TCPLC
Sbjct:  243 LATRRYQASCRQARGEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRNCVDPWL-HQHRTCPLC 312

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. SwissProt
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.004e-7
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 2

Query:  680 CCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCR 808
            CC+CLC +E   E+ EL C H FH  C+DKW  + +S CPLC+
Sbjct:  338 CCICLCEYEDGVELRELPCNHHFHCTCIDKWL-HINSRCPLCK 379

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
Match: D7SMB0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_137.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000538001 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 9.075e-34
Identity = 80/150 (53.33%), Postives = 98/150 (65.33%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSI------TNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWREC--CCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCRSM 814
            MGLSN+   AEGVLPVLVMNTV+ VALLKN+ +S+LQV+G   +S       +N  YSP                   VS+ Q+KSL +    SG+G GW     CCVCLC FEA +EVSEL+CKHFFH+ C +KWFDNKHS+CPLCRS+
Sbjct:    1 MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYSP----------MSENAKERRVSVTQFKSLSHS---SGTGTGWCSSMDCCVCLCRFEAEEEVSELSCKHFFHKGCWEKWFDNKHSSCPLCRSI 137

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
Match: B9SVL9_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0793900 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.448e-33
Identity = 78/142 (54.93%), Postives = 93/142 (65.49%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWRECCCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCRSM 814
            MGLS++P AAEGVLPVLVMNTVL VAL KN  +++LQVV      +    Y  +                  +SI Q+KS+   IG S S     ECC VCLCGFE ++EVSEL+CKHFFH+ CLDKWFDNKHSTCPLCRS+
Sbjct:    1 MGLSSFPSAAEGVLPVLVMNTVLSVALFKNWVRALLQVVMGANYWVPQYYYEQD---RPDVFSQDNARRERRISITQFKSMGAAIGTSRSSSSTVECC-VCLCGFEEDEEVSELSCKHFFHKGCLDKWFDNKHSTCPLCRSI 138

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
Match: C6T371_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.504e-32
Identity = 82/148 (55.41%), Postives = 94/148 (63.51%), Query Frame = 2

Query:  389 MGLSNYPCAA-EGVLPVLVMNTVLYVALLKNIFKSMLQVV--GCTRTSITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWRECCCVCLCGFEANQEVSELACKHFFHRVCLDKW--FDNKHSTCPLCRSMD 817
            MGLSN+P +A E VLPVLV+NTV  VALLK++F+S LQVV  G   +S +N  +   I                 VSI QYKSLC+     G        CCVCLC FE NQEVSEL CKH+FHR CLDKW  FDNKHSTCPLCRS+D
Sbjct:    1 MGLSNFPISASERVLPVLVINTVFSVALLKSMFRSTLQVVFGGSAASSSSNIEHDDEISSSSSSRERR-------VSITQYKSLCHSHDIGGGTSVAMVECCVCLCRFEDNQEVSELPCKHYFHRGCLDKWFEFDNKHSTCPLCRSID 141

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
Match: B9HTS5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_804914 PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.449e-31
Identity = 75/141 (53.19%), Postives = 93/141 (65.96%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWRECCCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCRS 811
            MGLS++P AAEGVLPVLVMNTVL VALLK++ +S+LQ+V         ++++P                   +SI Q+KSL    G + +       CCVCLCGFEA +EVSEL+CKHFFHR CLDKWFDN H+TCPLCRS
Sbjct:    1 MGLSSFPGAAEGVLPVLVMNTVLSVALLKSMVRSVLQLV-------VGANWTPPDYEEEPDEYRRENARERRISITQFKSLNQNDGGARNSAME---CCVCLCGFEAEEEVSELSCKHFFHRGCLDKWFDNIHATCPLCRS 131

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
Match: Q9FYK6_ARATH (F21J9.24 OS=Arabidopsis thaliana GN=At1g24580 PE=4 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.946e-29
Identity = 69/143 (48.25%), Postives = 86/143 (60.14%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWRECCCVCLCGFEANQEVSEL-ACKHFFHRVCLDKWFDNKHSTCPLCRSM 814
            MGLS++P A+EGVLP+LVMNTV+ + LLKN+ +S+ Q+V     S       P                   +SI Q+KSLC  I       G    CCVCLCGF+  +EVSEL +CKHFFHR CLD WF N H+TCPLCRS+
Sbjct:    1 MGLSHFPTASEGVLPLLVMNTVVSITLLKNMVRSVFQIVASETESSMEIDDEPE-----------DDFVTRRISITQFKSLCENIEEEEEEKGVE--CCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNHTTCPLCRSI 130

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
Match: B9HLQ1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_766645 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.362e-28
Identity = 70/142 (49.30%), Postives = 88/142 (61.97%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWRECCCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCRSM 814
            MGLS++P AA GVLP L+MNT+L VALLKN  +S+LQV+         ++++P                   +SI Q+KSL      +         CCVCLCGF+A +EVSEL CKHFFHR CLDKWFDNK +TCPLCRS+
Sbjct:    1 MGLSSFPGAA-GVLPELLMNTILLVALLKNTVRSVLQVMA-------GANWTPPDYEEEPDGHPQENARERRMSITQFKSLQQNHDGTSYRVSTAMECCVCLCGFQAEEEVSELHCKHFFHRGCLDKWFDNKQATCPLCRSI 134

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
Match: D7KAL6_ARALY (F21J9.24 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_890213 PE=4 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 3.693e-27
Identity = 68/146 (46.58%), Postives = 85/146 (58.22%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWREC---CCVCLCGFEANQEVSEL-ACKHFFHRVCLDKWFDNKHSTCPLCRSM 814
            MGLS++P A+EGVLP+LVMNTV+ V LLKN+ +S+ Q+V     S     + P                   +SI  +KSL    G         E    CCVCLCGF+  +EVSEL +CKHFFHR CLD WF N H+TCPLCRS+
Sbjct:    1 MGLSHFPTASEGVLPLLVMNTVVSVTLLKNMVRSVFQIVASETESSMEIEHEPE-----------EDFVRRRISITHFKSLYENRGEEEEEEEEEERGVECCVCLCGFKEEEEVSELVSCKHFFHRTCLDNWFGNNHTTCPLCRSI 135

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
Match: B3H543_ARATH (Uncharacterized protein At1g67856.1 OS=Arabidopsis thaliana GN=At1g67856 PE=4 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.833e-26
Identity = 64/145 (44.14%), Postives = 87/145 (60.00%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWREC--CCVCLCGFEANQEVSEL-ACKHFFHRVCLDKWFDNKHSTCPLCRSM 814
            MG+S+YP A+EGV+P+LVMNTV+ V+L+KN+ +S++ +V        N     +                  +SI  ++SLC   G        RE   CCVCLCGF+  +EVSEL +CKH+FH  CLDKWF N H+TCPLCRS+
Sbjct:    1 MGISHYPTASEGVMPMLVMNTVVSVSLVKNMVRSVVNMVSSETNEARNKEDDQD---------HEDSKRRRRISITHFESLCENRGSRNE----REAMDCCVCLCGFKEEEEVSELVSCKHYFHSACLDKWFGNNHTTCPLCRSI 132

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
Match: A5C5W4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010591 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.965e-26
Identity = 77/178 (43.26%), Postives = 98/178 (55.06%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSI------TNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNK---IGRSGSGCGWRECCCVCLCG------------FEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCRSMD*TTYLYASQLLVIS 859
            MGLSN+   AEGVLPVLVMNTV+ VALLKN+ +S+LQV+G   +S       +N  YSP                   VS+ Q+KSL +    +GRS + C        C  G            FEA +EVSEL+CKHFFH+ C +KWFDNKHS+CPL +      Y Y  +L +IS
Sbjct:  469 MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYSP----------MSENAKERRVSVTQFKSLXHSRSSVGRSENACSAGRSENACSAGSSGTGTGTGSGWFEAEEEVSELSCKHFFHKGCWEKWFDNKHSSCPLWKE----GYHYLLELQIIS 632

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
Match: D7KVQ2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475894 PE=4 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.519e-24
Identity = 62/145 (42.76%), Postives = 84/145 (57.93%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWREC--CCVCLCGFEANQEVSEL-ACKHFFHRVCLDKWFDNKHSTCPLCRSM 814
            MGLS+YP A+EGV+P+LVMNTV+ V++ KN+ +S+L +V        N                        +S+  + S  N+  +       RE   CCVCLCGF+  +EVSEL +CKH+FH  CLDKWF N H+TCPLCRS+
Sbjct:    1 MGLSHYPTASEGVVPMLVMNTVVSVSVFKNMVRSVLNMVSSETNEAKNKE---------DDQAHEDSKRRRRISVTHFGSAENRGSKHE-----REAMECCVCLCGFKEEEEVSELVSCKHYFHTACLDKWFSNDHTTCPLCRSI 131

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide
Match: AT1G67856.1 (| Symbols: | RING/U-box superfamily protein | chr1:25442486-25442887 FORWARD LENGTH=133)

HSP 1 Score: 124.405 bits (311), Expect = 1.093e-28
Identity = 64/145 (44.14%), Postives = 87/145 (60.00%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRTSITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWREC--CCVCLCGFEANQEVSEL-ACKHFFHRVCLDKWFDNKHSTCPLCRSM 814
            MG+S+YP A+EGV+P+LVMNTV+ V+L+KN+ +S++ +V        N     +                  +SI  ++SLC   G        RE   CCVCLCGF+  +EVSEL +CKH+FH  CLDKWF N H+TCPLCRS+
Sbjct:    1 MGISHYPTASEGVMPMLVMNTVVSVSLVKNMVRSVVNMVSSETNEARNKEDDQD---------HEDSKRRRRISITHFESLCENRGSRNE----REAMDCCVCLCGFKEEEEVSELVSCKHYFHSACLDKWFGNNHTTCPLCRSI 132

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide
Match: AT1G24580.1 (| Symbols: | RING/U-box superfamily protein | chr1:8710232-8710573 FORWARD LENGTH=113)

HSP 1 Score: 106.686 bits (265), Expect = 2.359e-23
Identity = 56/125 (44.80%), Postives = 69/125 (55.20%), Query Frame = 2

Query:  443 MNTVLYVALLKNIFKSMLQVVGCTRTSITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWRECCCVCLCGFEANQEVSEL-ACKHFFHRVCLDKWFDNKHSTCPLCRSM 814
            MNTV+ + LLKN+ +S+ Q+V     S       P                   +SI Q+KSLC  I       G    CCVCLCGF+  +EVSEL +CKHFFHR CLD WF N H+TCPLCRS+
Sbjct:    1 MNTVVSITLLKNMVRSVFQIVASETESSMEIDDEPE-----------DDFVTRRISITQFKSLCENIEEEEEEKGVE--CCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNHTTCPLCRSI 112

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide
Match: AT2G04240.2 (| Symbols: XERICO | RING/U-box superfamily protein | chr2:1461816-1462304 REVERSE LENGTH=162)

HSP 1 Score: 85.5001 bits (210), Expect = 5.627e-17
Identity = 48/152 (31.58%), Postives = 78/152 (51.32%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRT-----------SITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWRECCCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCRS 811
            MGLS+ P  +EG+L V+++NT L ++++K I +S L +VG + +           S  NSS S +                      +++SLC    ++ + C       VCL  F+ + E+++L C H FH+ CL+KW D  + TCPLCR+
Sbjct:    1 MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSENSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECS------VCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRT 146

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide
Match: AT2G04240.1 (| Symbols: XERICO | RING/U-box superfamily protein | chr2:1461816-1462304 REVERSE LENGTH=162)

HSP 1 Score: 85.5001 bits (210), Expect = 5.627e-17
Identity = 48/152 (31.58%), Postives = 78/152 (51.32%), Query Frame = 2

Query:  389 MGLSNYPCAAEGVLPVLVMNTVLYVALLKNIFKSMLQVVGCTRT-----------SITNSSYSPNIXXXXXXXXXXXXXXXXXVSIRQYKSLCNKIGRSGSGCGWRECCCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCRS 811
            MGLS+ P  +EG+L V+++NT L ++++K I +S L +VG + +           S  NSS S +                      +++SLC    ++ + C       VCL  F+ + E+++L C H FH+ CL+KW D  + TCPLCR+
Sbjct:    1 MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSENSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECS------VCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNITCPLCRT 146

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide
Match: AT3G61460.1 (| Symbols: BRH1 | brassinosteroid-responsive RING-H2 | chr3:22741701-22742213 REVERSE LENGTH=170)

HSP 1 Score: 62.7734 bits (151), Expect = 3.906e-10
Identity = 28/55 (50.91%), Postives = 34/55 (61.82%), Query Frame = 2

Query:  650 SGSGCGWRECCCVCLCGFEANQEVSELA-CKHFFHRVCLDKWFDNKHSTCPLCRS 811
            + SG    E C VCL  FE  QE+  L  C+H FHR CLD+W D+   TCPLCR+
Sbjct:   84 TNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCPLCRT 138

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide
Match: AT4G32600.1 (| Symbols: | RING/U-box superfamily protein | chr4:15724010-15725737 FORWARD LENGTH=453)

HSP 1 Score: 60.4622 bits (145), Expect = 1.938e-9
Identity = 22/44 (50.00%), Postives = 32/44 (72.73%), Query Frame = 2

Query:  680 CCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCRS 811
            CC+CL  +  N+E+ EL C HFFH+ C+DKW    +++CPLC+S
Sbjct:  363 CCICLAKYANNEELRELPCSHFFHKECVDKWL-KINASCPLCKS 405

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide
Match: AT1G15100.1 (| Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703-5194170 REVERSE LENGTH=155)

HSP 1 Score: 59.3066 bits (142), Expect = 4.318e-9
Identity = 25/55 (45.45%), Postives = 32/55 (58.18%), Query Frame = 2

Query:  647 RSGSGCGWRECCCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCRS 811
            R G G G    C VCL   +  +EV +L C+H FH+ CL+ W    + TCPLCRS
Sbjct:   75 RCGDGGGGGSDCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRS 129

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide
Match: AT5G41400.1 (| Symbols: | RING/U-box superfamily protein | chr5:16569584-16570114 REVERSE LENGTH=176)

HSP 1 Score: 58.5362 bits (140), Expect = 7.366e-9
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 2

Query:  635 NKIGRSGSGCGWRECCCVCLCGFEANQEVSELA-CKHFFHRVCLDKW-FDNKHSTCPLCRS 811
            +++ R G G G  +CC VCL  FE + E+  L  C+H FHR CLD+W       TCPLCR+
Sbjct:   91 SELTRPGFGSG-SDCCAVCLHEFENDDEIRRLTNCQHIFHRSCLDRWMMGYNQMTCPLCRT 150

[Close]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide
Match: AT4G11680.1 (| Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr4:7053737-7055516 REVERSE LENGTH=390)

HSP 1 Score: 58.151 bits (139), Expect = 9.620e-9
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 2

Query:  680 CCVCLCGFEANQEVSELACKHFFHRVCLDKWFDNKHSTCPLCR 808
            CC+CLC +E   E+ EL C H FH  C+DKW  + +S CPLC+
Sbjct:  338 CCICLCEYEDGVELRELPCNHHFHCTCIDKWL-HINSRCPLCK 379

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BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide
Match: AT3G51325.1 (| Symbols: | RING/U-box superfamily protein | chr3:19052259-19052531 FORWARD LENGTH=90)

HSP 1 Score: 57.7658 bits (138), Expect = 1.256e-8
Identity = 27/61 (44.26%), Postives = 35/61 (57.38%), Query Frame = 2

Query:  674 ECCCVCLCGFEANQEVSELACKHFFHRVCLDKWFD-NKHSTCPLCRSMD*TTYLYASQLLV 853
            ECC VCL   EA   +  L C H FH +C+D WF+ ++   CPLCR    TT L   +LL+
Sbjct:   24 ECCSVCLMRMEAKDVIKSLPCSHEFHSLCVDTWFNVSRKICCPLCR-FSPTTILLTDELLL 83

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig3605 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig3605 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 5


Match Name	E-value	Identity	Description
YOF7_SCHPO	2.642e-8	50.00	Uncharacterized RING finger protein P4H10.07 OS=Sc...	[more]
RHA2A_ARATH	4.506e-8	45.45	E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis t...	[more]
RNF43_MOUSE	5.885e-8	38.03	RING finger protein 43 OS=Mus musculus GN=Rnf43 PE...	[more]
RNF43_HUMAN	5.885e-8	38.03	RING finger protein 43 OS=Homo sapiens GN=RNF43 PE...	[more]
RING4_ARATH	1.004e-7	51.16	E3 ubiquitin-protein ligase At4g11680 OS=Arabidops...	[more]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7SMB0_VITVI	9.075e-34	53.33	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SVL9_RICCO	3.448e-33	54.93	Protein binding protein, putative OS=Ricinus commu...	[more]
C6T371_SOYBN	6.504e-32	55.41	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9HTS5_POPTR	1.449e-31	53.19	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9FYK6_ARATH	3.946e-29	48.25	F21J9.24 OS=Arabidopsis thaliana GN=At1g24580 PE=4...	[more]
B9HLQ1_POPTR	4.362e-28	49.30	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7KAL6_ARALY	3.693e-27	46.58	F21J9.24 OS=Arabidopsis lyrata subsp. lyrata GN=AR...	[more]
B3H543_ARATH	1.833e-26	44.14	Uncharacterized protein At1g67856.1 OS=Arabidopsis...	[more]
A5C5W4_VITVI	6.965e-26	43.26	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7KVQ2_ARALY	6.519e-24	42.76	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of Cicer_arietinum_v1_Contig3605 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G67856.1	1.093e-28	44.14	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G24580.1	2.359e-23	44.80	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT2G04240.2	5.627e-17	31.58	\| Symbols: XERICO \| RING/U-box superfamily protein...	[more]
AT2G04240.1	5.627e-17	31.58	\| Symbols: XERICO \| RING/U-box superfamily protein...	[more]
AT3G61460.1	3.906e-10	50.91	\| Symbols: BRH1 \| brassinosteroid-responsive RING-...	[more]
AT4G32600.1	1.938e-9	50.00	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G15100.1	4.318e-9	45.45	\| Symbols: RHA2A \| RING-H2 finger A2A \| chr1:51937...	[more]
AT5G41400.1	7.366e-9	45.90	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT4G11680.1	9.620e-9	51.16	\| Symbols: \| Zinc finger, C3HC4 type (RING finger...	[more]
AT3G51325.1	1.256e-8	44.26	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 7..26 score
None	No IPR available	PANTHER	PTHR14155	RING FINGER PROTEIN 6/12/38	coord: 104..145 score: 2.7
None	No IPR available	PANTHER	PTHR14155:SF2	RING FINGER PROTEIN 38	coord: 104..145 score: 2.7
None	No IPR available	SEG	seg	seg	coord: 62..78 score
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 46..148 score: 6
None	No IPR available	SEG	seg	seg	coord: 12..27 score: NAcoord: 37..53 score
None	No IPR available	SEG	seg	seg	coord: 31..56 score
None	No IPR available	SEG	seg	seg	coord: 41..49 score: NAcoord: 78..88 score
None	No IPR available	SEG	seg	seg	coord: 89..108 score
IPR001841	Zinc finger, RING-type	SMART	SM00184	no description	coord: 104..145 score: 0.0
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 104..146 score: 11
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	no description	coord: 103..146 score: 0.
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 102..147 score: 4.8
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 104..145 score: 1.5

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig3605 ID=Cicer_arietinum_v1_Contig3605; Name=Cicer_arietinum_v1_Contig3605; organism=Cicer arietinum; type=contig; length=1066bp
AGCCGCGCCAGCGGCAGCCCGCGCGCGCCGCCACGCGCCGCAGCCCCAGC
GCCCCACCCCGCCGCGCCGCGCCCGCCTGGGGAAAAAAACCGGCGCAAGG
ACCCACGGGAAAACGGCCAAAGGCCAATTAAGGAGGTGACCACTAATAAG
ACAAAAACCTCCCAAGGCCTAGTTGCCCACTTCCCAAACGGGCGGGTTTG
GGGGAAAGGCTTCTCCCCATTTATTGGTTCAGACCTTGGAAGGCCGGGCC
GCGGAATTACAACTAAGGTGAATTTCCGAAGCGGCCCGCCCGGGGCAGGT
ATTTTTTTGGTCTTTATATTTAATTCCCTCTTCTCCTCTGCTCAATTAAA
AAAGCAAGGCAATTAATTGAGTTTCAATTTTGAGAGTAATGGGCCTCTCA
AATTATCCTTGTGCAGCAGAAGGTGTGTTACCTGTGCTTGTGATGAACAC
GGTTTTGTATGTGGCTTTATTAAAGAACATATTCAAATCCATGCTTCAAG
TAGTTGGTTGCACAAGAACATCAATCACTAATTCATCTTATTCACCAAAT
ATTGAGGAAGAAGAAGAAGAACAAGAGTCCCAATTAGAAGAGAGGGAAAG
GAGGGTGTCAATAAGACAGTACAAGTCATTGTGCAACAAGATAGGAAGAA
GTGGAAGTGGATGTGGATGGAGAGAGTGTTGTTGTGTGTGTTTGTGTGGT
TTTGAAGCAAATCAGGAGGTGAGTGAGTTGGCTTGCAAGCATTTCTTCCA
CAGAGTTTGCTTAGATAAATGGTTTGATAACAAACACAGTACTTGTCCTT
TATGTCGTTCCATGGACTAGACTACTTACTTATATGCTTCTCAACTTCTA
GTTATTAGTTTGAGTTAAATTAGAGTTAATTGTTATTAATTTGTTGCAGT
GTTAAAGAATTAATGCTTCTTTTTTCTGTTCAATTACCTCTCTAATTCTC
TATGTTTACTATTGAATGTTCACTTCACACTAAGTGATTTCAATTTAGTT
GCATGTATATAAAGTGTGAATTCTAATATCTCAGATAGTTTTTTAATTTT
AATAATCCATTTTTTT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR011016	Znf_RING-CH
IPR013083	Znf_RING/FYVE/PHD
IPR018957	Znf_C3HC4_RING-type

Search form

Cicer_arietinum_v1_Contig3605